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MF140397.1__ASR83194.1__SEA_ABIDATRO_24__00024
Bact-VirMF140397.1__ASR83194.1__SEA_ABIDATRO_24__00024
Identity
- Accession:
- MF140397 ↗
- Kingdom:
- phage
Quality
85.7
mean pLDDT
Taxonomy
TaxID: 2015853
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-157
Domain cluster:
rep: NC_041875.1__YP_009594310.1__FDG92_gp21__00021__D5-180
D2
medium
residues 184-276
Domain cluster:
rep: MH884509.1__AYP68381.1__BboS125_00011__00011__D179-270
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01476.27 best | LysM | 42.9 | 5.30e-11 | 47.3% | 97.7% |
| PF01476.27 | LysM | 39.1 | 7.90e-10 | 45.2% | 93.0% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4b8vA02 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.76 | 49.0 | 5.45e-01 | 83.9% | 82.2% |
| 2djpA00 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.75 | 45.0 | 4.98e-01 | 88.2% | 74.0% |
| 3op9A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.51 | 30.0 | 3.38e-01 | 73.1% | 77.9% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3426433 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.90 | 46.0 | 5.80e-01 | 100.0% | 80.0% |
| 3974521 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.88 | 47.0 | 5.86e-01 | 96.8% | 83.3% |
| 3501971 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.88 | 49.0 | 6.05e-01 | 86.0% | 86.7% |
| 4205026 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.87 | 50.0 | 6.00e-01 | 95.7% | 83.1% |
| 3898121 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.86 | 45.0 | 5.94e-01 | 80.6% | 89.1% |
| 2074716 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.86 | 45.0 | 6.09e-01 | 80.6% | 96.1% |
| 4277578 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.86 | 44.0 | 6.02e-01 | 100.0% | 96.0% |
| 3903953 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.85 | 43.0 | 5.89e-01 | 80.6% | 94.0% |
| 4149501 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.84 | 43.0 | 5.82e-01 | 80.6% | 94.0% |
| 3165082 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.84 | 44.0 | 6.00e-01 | 100.0% | 98.0% |
| 3636417 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.84 | 45.0 | 5.94e-01 | 100.0% | 94.3% |
| 3458171 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 49.0 | 5.89e-01 | 100.0% | 86.2% |
| 3306283 | 101.15.1.8 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_NFP | 0.82 | 44.0 | 5.19e-01 | 100.0% | 75.4% |
| 4555777 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.82 | 45.0 | 5.19e-01 | 100.0% | 72.9% |
| 3720958 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.82 | 43.0 | 5.71e-01 | 100.0% | 96.0% |
| 3355077 | 101.15.1.13 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK | 0.81 | 44.0 | 5.58e-01 | 71.0% | 90.9% |
| 3985839 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.80 | 48.0 | 5.57e-01 | 100.0% | 81.4% |
| 3338947 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.78 | 46.0 | 5.45e-01 | 87.1% | 84.6% |
| 1178373 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.78 | 45.0 | 5.44e-01 | 100.0% | 85.7% |
| 4015813 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.77 | 41.0 | 4.97e-01 | 80.6% | 80.0% |
| 3247196 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.77 | 41.0 | 5.01e-01 | 77.4% | 81.7% |
| 3367888 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.76 | 45.0 | 5.14e-01 | 100.0% | 78.6% |
| 3670445 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.76 | 70.0 | 4.78e-01 | 100.0% | 36.8% |
| 3217972 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.76 | 46.0 | 5.62e-01 | 77.4% | 95.0% |
| 3655928 | 101.15.1.13 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK | 0.76 | 50.0 | 4.90e-01 | 74.2% | 63.0% |
| 2124918 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.75 | 69.0 | 6.01e-01 | 100.0% | 82.4% |
| 2042916 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.75 | 42.0 | 5.36e-01 | 83.9% | 96.3% |
| 3417561 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.75 | 68.0 | 4.75e-01 | 100.0% | 38.0% |
| 162111 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.75 | 45.0 | 4.98e-01 | 88.2% | 74.0% |
| 3365578 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.73 | 49.0 | 5.32e-01 | 100.0% | 81.2% |
| 3821115 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.73 | 46.0 | 4.90e-01 | 80.6% | 71.8% |
| 3643631 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.72 | 45.0 | 5.32e-01 | 80.6% | 90.8% |
| 3464064 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.72 | 52.0 | 5.42e-01 | 96.8% | 81.2% |
| 3666767 | 101.15.1.10 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP | 0.72 | 59.0 | 5.66e-01 | 89.2% | 96.2% |
| 3671032 | 101.15.1.11 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_NFP | 0.71 | 63.0 | 5.26e-01 | 100.0% | 66.7% |
| 3970704 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.71 | 44.0 | 5.27e-01 | 100.0% | 90.8% |
| 3188069 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.70 | 45.0 | 5.39e-01 | 100.0% | 93.8% |
| 3381619 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.70 | 63.0 | 4.41e-01 | 100.0% | 38.2% |
| 3337328 | 101.15.1.14 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM, LysM2_CERK1_LYK3_4_5 | 0.69 | 62.0 | 4.39e-01 | 100.0% | 39.8% |
| 3811719 | 101.15.1.9 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_CERK1_LYK3_4_5 | 0.69 | 62.0 | 5.27e-01 | 100.0% | 75.3% |
| 2035755 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.69 | 53.0 | 5.19e-01 | 100.0% | 75.8% |
| 3353525 | 101.15.1.6 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_CERK1_LYK3_4_5 | 0.67 | 59.0 | 5.39e-01 | 100.0% | 89.6% |
| 4137479 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.67 | 53.0 | 5.57e-01 | 91.4% | 91.8% |
| 2124917 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.66 | 56.0 | 4.57e-01 | 89.2% | 58.4% |
| 3655335 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.66 | 56.0 | 4.53e-01 | 89.2% | 56.4% |
| 3309886 | 101.15.1.9 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_CERK1_LYK3_4_5 | 0.65 | 57.0 | 4.98e-01 | 100.0% | 73.1% |
| 3810505 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.63 | 54.0 | 4.35e-01 | 89.2% | 70.9% |
| 3598919 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.51 | 46.0 | 3.39e-01 | 98.9% | 49.2% |