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MF140404.1__ASR83431.1__SEA_CHRISTIAN_48__00048

Bact-Vir

MF140404.1__ASR83431.1__SEA_CHRISTIAN_48__00048

Identity

Accession:
MF140404 ↗
Kingdom:
phage

Quality

76.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Korravirus› Arthrobacter_phage_Christian

TaxID: 2015856

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-60
PDB
Domain cluster: representative
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.65 45.0 4.53e-01 96.6% 72.9%
4wiwA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.60 45.0 4.39e-01 84.7% 100.0%
6gmhH01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 46.0 3.71e-01 96.6% 88.9%
2i46A00 2.40.50.960 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 46.0 3.49e-01 88.1% 41.4%
7oc3A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 44.0 3.94e-01 96.6% 55.4%
4wj7D00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 49.0 3.90e-01 96.6% 87.0%
1v5mA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 48.0 3.76e-01 96.6% 69.1%
2la7A01 2.40.128.270 Mainly Beta › Beta Barrel › Lipocalin › 0.57 48.0 3.84e-01 98.3% 91.4%
1w1hD00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 47.0 3.60e-01 91.5% 51.8%
1gd5A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.57 41.0 3.19e-01 78.0% 36.9%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.56 41.0 4.01e-01 79.7% 80.6%
2dn6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 46.0 3.78e-01 96.6% 69.6%
4zovB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 45.0 2.85e-01 96.6% 99.5%
2d9wA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 44.0 3.73e-01 96.6% 89.1%
3cxbB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 43.0 3.73e-01 96.6% 83.5%
1btkA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 43.0 3.26e-01 96.6% 65.6%
3h0gH00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 41.0 3.46e-01 98.3% 86.3%
3gniB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 36.0 3.31e-01 78.0% 89.9%
1aqcB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 42.0 3.44e-01 94.9% 76.2%
1wi1A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 41.0 3.53e-01 96.6% 79.3%
1faoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 42.0 3.64e-01 96.6% 79.0%
3pr6A00 3.30.450.70 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.51 43.0 3.30e-01 98.3% 91.0%
3ozbA00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.51 41.0 2.79e-01 91.5% 34.4%
2n54B00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 39.0 3.79e-01 100.0% 77.3%
1v4nA00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.51 40.0 2.71e-01 93.2% 83.1%
3au4A04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 42.0 3.73e-01 100.0% 83.9%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.50 43.0 4.04e-01 94.9% 78.9%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4931409 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 56.0 4.37e-01 96.6% 78.5%
4926953 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 53.0 4.25e-01 94.9% 67.5%
3899072 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.61 46.0 4.41e-01 88.1% 68.6%
4174818 4.8.1.40 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › FlbD 0.61 43.0 4.50e-01 94.9% 81.8%
3281007 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 51.0 3.84e-01 94.9% 57.3%
119159 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.60 37.0 3.66e-01 74.6% 56.2%
3280978 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.60 38.0 3.66e-01 74.6% 54.3%
3478713 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.58 49.0 3.93e-01 96.6% 46.7%
4497266 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.58 48.0 3.87e-01 91.5% 76.3%
3997784 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 48.0 3.63e-01 94.9% 55.3%
3407369 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.58 49.0 3.07e-01 100.0% 100.0%
3234621 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.58 47.0 3.67e-01 93.2% 58.5%
3273237 220.1.1.26 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Vps36_ESCRT-II 0.57 48.0 3.84e-01 96.6% 80.8%
3252283 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 45.0 3.58e-01 88.1% 44.0%
4382135 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.57 44.0 3.67e-01 86.4% 68.2%
3888868 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 48.0 3.88e-01 96.6% 68.3%
3572707 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 49.0 3.90e-01 100.0% 80.0%
4951338 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.56 46.0 3.70e-01 91.5% 78.3%
4949063 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.56 45.0 3.65e-01 88.1% 77.2%
3391222 220.1.1.207 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF25916 0.56 46.0 3.70e-01 94.9% 71.2%
4951344 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.56 45.0 3.74e-01 93.2% 80.0%
3253077 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 46.0 3.66e-01 100.0% 74.1%
1723644 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 45.0 2.81e-01 96.6% 96.2%
3205743 375.1.1.26 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.55 46.0 3.74e-01 98.3% 50.8%
4936173 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.54 43.0 3.47e-01 91.5% 80.8%
3393858 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 44.0 3.66e-01 96.6% 82.6%
5080919 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 45.0 3.72e-01 96.6% 52.4%
3230852 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 44.0 4.42e-01 100.0% 95.0%
3268983 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 44.0 3.64e-01 96.6% 70.4%
4953898 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.53 41.0 3.39e-01 91.5% 80.0%
4951333 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.53 40.0 3.34e-01 88.1% 78.3%
3684504 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.53 35.0 3.03e-01 72.9% 40.0%
3002315 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 35.0 3.42e-01 76.3% 60.0%
3516025 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.52 44.0 3.68e-01 94.9% 62.9%
5039851 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 33.0 3.68e-01 88.1% 100.0%
4407594 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.51 41.0 2.85e-01 93.2% 85.8%
3786245 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.51 41.0 3.81e-01 94.9% 88.0%
3983415 222.1.1.0 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.51 42.0 4.00e-01 96.6% 93.2%
5076865 2011.2.1.1 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PNP_UDP_1 0.51 39.0 2.65e-01 91.5% 20.7%
4930436 220.1.1.219 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.50 41.0 3.45e-01 98.3% 79.1%
3744357 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.50 41.0 3.74e-01 96.6% 90.6%
3228944 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.50 41.0 3.46e-01 96.6% 70.9%