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MF140413.1__ASR87036.1__SEA_KINGSOLOMON_117__00107
Bact-VirMF140413.1__ASR87036.1__SEA_KINGSOLOMON_117__00107
Identity
- Accession:
- MF140413 ↗
- Kingdom:
- phage
Quality
76.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Vilmaviridae›
Lumosvirus›
Mycobacterium_phage_Kingsolomon
TaxID: 2015884
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-41
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gviA03 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.77 | 54.0 | 5.45e-01 | 74.3% | 94.1% |
| 2eqgA01 | 4.10.240.30 | Few Secondary Structures › Irregular › CD2-Gal4 › | 0.67 | 52.0 | 5.20e-01 | 97.1% | 97.4% |
| 2e9xD01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 46.0 | 3.07e-01 | 80.0% | 29.9% |
| 7sbeA01 | 1.10.132.70 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.57 | 44.0 | 2.82e-01 | 97.1% | 96.9% |
| 7r0kA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.55 | 41.0 | 2.64e-01 | 80.0% | 38.0% |
| 6qkgA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 46.0 | 2.63e-01 | 100.0% | 10.8% |
| 1eepA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 46.0 | 2.71e-01 | 100.0% | 74.5% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4367464 | 377.1.3.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › Zinc-binding subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.88 | 63.0 | 6.59e-01 | 77.1% | 93.3% |
| 4524742 | 377.1.3.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › Zinc-binding subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.85 | 61.0 | 6.49e-01 | 77.1% | 93.3% |
| 4376902 | 377.1.1.2 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_S14 | 0.84 | 64.0 | 4.69e-01 | 85.7% | 33.0% |
| 1430093 | 377.1.1.2 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_S14 | 0.79 | 60.0 | 5.13e-01 | 88.6% | 60.7% |
| 4945257 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 56.0 | 4.77e-01 | 85.7% | 50.0% |
| 3450140 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.70 | 58.0 | 5.82e-01 | 94.3% | 94.3% |
| 3307577 | 375.1.1.222 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF29994 | 0.69 | 57.0 | 5.76e-01 | 94.3% | 94.3% |
| 5021263 | 3414.1.1.13 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › PF29994 | 0.67 | 55.0 | 3.79e-01 | 94.3% | 26.4% |
| 3477617 | 109.4.1.449 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2,TPR_8 | 0.54 | 44.0 | 2.52e-01 | 94.3% | 52.6% |
| 3550392 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 43.0 | 2.74e-01 | 91.4% | 57.8% |
| 3180112 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.51 | 36.0 | 3.05e-01 | 74.3% | 55.7% |
| 3486337 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 39.0 | 3.53e-01 | 94.3% | 87.3% |
| 3862499 | 192.29.1.117 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Ima1_N | 0.50 | 40.0 | 3.60e-01 | 97.1% | 94.5% |