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MF140434.1__ASR84173.1__SEA_WHEELBITE_85__00085
Bact-VirMF140434.1__ASR84173.1__SEA_WHEELBITE_85__00085
Identity
- Accession:
- MF140434 ↗
- Kingdom:
- phage
Quality
76.7
mean pLDDT
Taxonomy
TaxID: 2015873
Cluster
View cluster (13 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-89
Domain cluster:
rep: MH651168.1__AXQ62964.1__SEA_ASHERTHEMAN_57__00057__D3-84
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4lwsA00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.71 | 36.0 | 3.45e-01 | 95.4% | 44.0% |
| 3bosA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.63 | 45.0 | 5.03e-01 | 82.8% | 98.5% |
| 1qsdA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 31.0 | 2.95e-01 | 94.3% | 40.2% |
| 1nvmA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.61 | 42.0 | 4.74e-01 | 85.1% | 98.4% |
| 4nooB00 | 1.10.8.1160 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.58 | 42.0 | 4.09e-01 | 75.9% | 92.6% |
| 3fnbA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.58 | 38.0 | 3.45e-01 | 96.6% | 50.9% |
| 6rxaA01 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.58 | 39.0 | 4.00e-01 | 74.7% | 70.1% |
| 6cy5A01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.54 | 38.0 | 3.82e-01 | 78.2% | 73.0% |
| 1fx0A03 | 1.20.150.20 | Mainly Alpha › Up-down Bundle › Lysin › ATP synthase alpha/beta chain, C-terminal domain | 0.53 | 41.0 | 3.68e-01 | 85.1% | 68.2% |
| 2ejqB00 | 3.30.2010.20 | Alpha Beta › 2-Layer Sandwich › Zincin-like › | 0.53 | 38.0 | 3.58e-01 | 78.2% | 97.4% |
| 1k07A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.53 | 47.0 | 3.38e-01 | 98.9% | 50.8% |
| 3hmfA00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.53 | 36.0 | 3.30e-01 | 70.1% | 77.6% |
| 3ipiA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.52 | 45.0 | 3.19e-01 | 94.3% | 61.2% |
| 3ed5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.52 | 34.0 | 3.49e-01 | 79.3% | 69.0% |
| 1lj2A00 | 1.20.5.970 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Nonstructural RNA-binding protein | 0.51 | 38.0 | 3.54e-01 | 92.0% | 63.2% |
| 1qguB04 | 1.20.89.10 | Mainly Alpha › Up-down Bundle › Nitrogenase Molybdenum-iron Protein, subunit B; domain 4 › Nitrogenase Molybdenum-iron Protein, subunit B, domain 4 | 0.50 | 39.0 | 4.03e-01 | 93.1% | 89.2% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4033485 | 571.1.1.1 ↗ | alpha arrays › Replisome organizer (g39p helicase loader/inhibitor protein) › Replisome organizer (g39p helicase loader/inhibitor protein) › Replisome organizer (g39p helicase loader/inhibitor protein) › G39P_N | 0.77 | 55.0 | 6.24e-01 | 85.1% | 100.0% |
| 3563871 | 603.1.1.121 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF30821 | 0.71 | 39.0 | 3.49e-01 | 89.7% | 40.9% |
| 3484089 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.69 | 56.0 | 5.79e-01 | 90.8% | 95.0% |
| 4126876 | 103.1.1.67 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UPF0515 | 0.67 | 37.0 | 4.11e-01 | 79.3% | 67.1% |
| 4279089 | 7094.1.1.3 ↗ | alpha bundles › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › OPA1_C | 0.66 | 38.0 | 3.44e-01 | 98.9% | 41.7% |
| 5061574 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.66 | 51.0 | 5.40e-01 | 85.1% | 96.0% |
| 3870735 | 601.25.1.5 ↗ | alpha bundles › Four-helical up-and-down bundle › TrmE connector domain › TrmE connector domain › OPA1_C | 0.66 | 39.0 | 3.42e-01 | 96.6% | 40.8% |
| 4947750 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.65 | 50.0 | 4.86e-01 | 88.5% | 73.0% |
| 4014891 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.64 | 55.0 | 5.34e-01 | 94.3% | 86.3% |
| 4479859 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.64 | 36.0 | 4.01e-01 | 78.2% | 68.6% |
| 4950231 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.63 | 55.0 | 5.40e-01 | 100.0% | 92.6% |
| 3524655 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.62 | 54.0 | 4.64e-01 | 96.6% | 61.4% |
| 3524656 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.62 | 54.0 | 4.76e-01 | 95.4% | 69.6% |
| 3940544 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.58 | 47.0 | 4.45e-01 | 90.8% | 93.3% |
| 3642946 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.57 | 40.0 | 4.17e-01 | 72.4% | 95.0% |
| 5009804 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.57 | 46.0 | 4.49e-01 | 89.7% | 87.4% |
| 4955330 | 148.1.3.409 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › BrxL_ATPase | 0.56 | 37.0 | 4.31e-01 | 78.2% | 98.3% |
| 4422279 | 6130.1.1.1 ↗ | alpha complex topology › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Se-cys_synth_N | 0.56 | 40.0 | 4.30e-01 | 88.5% | 89.3% |
| 3213401 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.55 | 48.0 | 4.80e-01 | 100.0% | 97.8% |
| 3741872 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.55 | 41.0 | 3.19e-01 | 78.2% | 78.9% |
| 5060357 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.55 | 43.0 | 4.42e-01 | 87.4% | 98.8% |
| 3783776 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.55 | 41.0 | 4.00e-01 | 78.2% | 92.6% |
| 3715000 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.52 | 38.0 | 3.73e-01 | 77.0% | 95.8% |
| 3345515 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.51 | 38.0 | 3.82e-01 | 80.5% | 97.8% |
| 3790618 | 621.1.1.1 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › GBP_C | 0.51 | 39.0 | 3.65e-01 | 80.5% | 91.4% |