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MF158039.1__ATE85794.1__Sf12_gp68__00067
Bact-VirMF158039.1__ATE85794.1__Sf12_gp68__00067
Identity
- Accession:
- MF158039 ↗
- Kingdom:
- phage
Quality
73.7
mean pLDDT
Taxonomy
TaxID: 2024315
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-61
Domain cluster:
rep: AM491472.1__CAM33116.1__VIP0011__00011__D30-84
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26839.1 best | DUF8272 | 64.6 | 9.90e-18 | 75.0% | 95.5% |
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.82 | 55.0 | 4.71e-01 | 70.0% | 46.2% |
| 4fvmA06 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.82 | 55.0 | 6.11e-01 | 70.0% | 87.5% |
| 3a8pA02 | 6.10.140.680 | Special › Helix non-globular › Helix Hairpins › | 0.79 | 54.0 | 4.28e-01 | 71.7% | 59.6% |
| 2rbdA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.78 | 63.0 | 4.61e-01 | 86.7% | 84.7% |
| 4wpeA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.77 | 52.0 | 3.28e-01 | 70.0% | 15.3% |
| 1m56C01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.76 | 51.0 | 4.89e-01 | 70.0% | 66.7% |
| 2gw1A02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.76 | 64.0 | 3.86e-01 | 90.0% | 23.1% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.76 | 51.0 | 5.23e-01 | 70.0% | 74.1% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.75 | 51.0 | 4.64e-01 | 70.0% | 57.1% |
| 2ib0A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.73 | 68.0 | 5.11e-01 | 100.0% | 60.0% |
| 4mtxD00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.73 | 49.0 | 4.22e-01 | 70.0% | 58.9% |
| 3fseB02 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.73 | 61.0 | 4.56e-01 | 91.7% | 89.6% |
| 1yxrA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.73 | 58.0 | 5.40e-01 | 86.7% | 91.9% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.73 | 62.0 | 5.23e-01 | 93.3% | 71.1% |
| 1wfdA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.72 | 57.0 | 4.88e-01 | 85.0% | 72.0% |
| 2oxlA00 | 1.20.5.5260 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.72 | 63.0 | 6.28e-01 | 98.3% | 93.5% |
| 4etrB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.72 | 56.0 | 4.49e-01 | 86.7% | 86.9% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.72 | 48.0 | 4.41e-01 | 70.0% | 94.9% |
| 2rkhA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.70 | 55.0 | 5.11e-01 | 85.0% | 100.0% |
| 1iuqA01 | 1.10.1200.50 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Glycerol-3-phosphate acyltransferase, alpha helical bundle, N-terminal | 0.68 | 50.0 | 4.63e-01 | 88.3% | 61.8% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 53.0 | 3.74e-01 | 86.7% | 60.8% |
| 3nz4B03 | 1.10.274.20 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 | 0.66 | 57.0 | 4.81e-01 | 98.3% | 76.0% |
| 1aueB00 | 1.20.120.150 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › FKBP12-rapamycin binding domain | 0.66 | 44.0 | 3.84e-01 | 70.0% | 44.7% |
| 2i2xB01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.65 | 51.0 | 4.34e-01 | 86.7% | 89.0% |
| 1owlA02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 56.0 | 4.45e-01 | 100.0% | 49.6% |
| 1v0dA01 | 6.10.140.170 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 46.0 | 4.96e-01 | 93.3% | 93.9% |
| 2yqyA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.63 | 42.0 | 3.37e-01 | 70.0% | 71.4% |
| 3zciA00 | 1.20.58.1660 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 47.0 | 3.44e-01 | 91.7% | 61.8% |
| 8d7hD01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.60 | 51.0 | 3.66e-01 | 93.3% | 70.5% |
| 2kvsA00 | 1.10.150.260 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › YozE SAM-like | 0.60 | 51.0 | 4.73e-01 | 100.0% | 83.7% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.59 | 40.0 | 3.51e-01 | 70.0% | 46.7% |
| 4fxdA04 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.59 | 55.0 | 3.96e-01 | 100.0% | 80.4% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 39.0 | 3.75e-01 | 70.0% | 68.5% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 39.0 | 3.50e-01 | 70.0% | 96.6% |
| 2klqA00 | 1.20.58.870 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 46.0 | 3.91e-01 | 100.0% | 59.6% |
| 3e98B00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.54 | 44.0 | 3.24e-01 | 93.3% | 75.3% |
| 1v07A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 42.0 | 3.63e-01 | 100.0% | 70.0% |
| 3rm5B02 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.51 | 46.0 | 3.10e-01 | 100.0% | 74.1% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5035200 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.90 | 57.0 | 5.19e-01 | 70.0% | 52.0% |
| 4465242 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.87 | 55.0 | 6.30e-01 | 70.0% | 86.7% |
| 4551916 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.86 | 58.0 | 4.38e-01 | 70.0% | 33.6% |
| 5048061 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.85 | 57.0 | 6.00e-01 | 70.0% | 76.4% |
| 4023439 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.84 | 61.0 | 5.79e-01 | 76.7% | 80.0% |
| 3289740 | 605.1.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 | 0.84 | 57.0 | 5.71e-01 | 70.0% | 70.0% |
| 5007621 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.83 | 56.0 | 4.70e-01 | 70.0% | 44.2% |
| 4266510 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.83 | 56.0 | 4.52e-01 | 70.0% | 40.0% |
| 3961229 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.83 | 56.0 | 3.79e-01 | 70.0% | 22.1% |
| 4628639 | 150.1.1.59 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Coat_F | 0.83 | 56.0 | 4.68e-01 | 70.0% | 44.2% |
| 3586032 | 605.1.1.237 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Patched | 0.82 | 56.0 | 4.50e-01 | 70.0% | 40.0% |
| 3590755 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.81 | 54.0 | 5.50e-01 | 70.0% | 70.0% |
| 4962699 | 101.1.2.924 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7342 | 0.81 | 53.0 | 3.81e-01 | 83.3% | 24.8% |
| 3222259 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.81 | 61.0 | 3.67e-01 | 80.0% | 42.2% |
| 3985434 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.81 | 54.0 | 4.66e-01 | 70.0% | 46.7% |
| 3570403 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.80 | 54.0 | 4.16e-01 | 70.0% | 33.6% |
| 3763454 | 5086.1.1.87 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › ING | 0.80 | 54.0 | 4.21e-01 | 70.0% | 35.0% |
| 4979981 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.80 | 54.0 | 4.32e-01 | 70.0% | 38.2% |
| 3550436 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.80 | 54.0 | 4.41e-01 | 70.0% | 40.4% |
| 3215342 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.80 | 54.0 | 4.55e-01 | 70.0% | 58.9% |
| 4123712 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.80 | 54.0 | 4.74e-01 | 70.0% | 50.6% |
| 5048590 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.80 | 54.0 | 4.31e-01 | 70.0% | 38.2% |
| 4937862 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.80 | 54.0 | 4.29e-01 | 70.0% | 38.2% |
| 3729252 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.80 | 54.0 | 4.23e-01 | 70.0% | 36.5% |
| 5044927 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.80 | 54.0 | 5.43e-01 | 70.0% | 70.0% |
| 3884649 | 192.5.1.1 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 | 0.79 | 54.0 | 4.52e-01 | 70.0% | 44.2% |
| 4397104 | 605.1.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 | 0.78 | 53.0 | 4.87e-01 | 70.0% | 76.0% |
| 4944773 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.78 | 70.0 | 5.10e-01 | 100.0% | 85.6% |
| 3987389 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.78 | 53.0 | 3.03e-01 | 70.0% | 8.3% |
| 4964878 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.78 | 52.0 | 4.97e-01 | 70.0% | 81.4% |
| 4962781 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.77 | 52.0 | 4.77e-01 | 70.0% | 57.3% |
| 3336503 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.76 | 51.0 | 3.98e-01 | 70.0% | 45.6% |
| 4375453 | 622.4.1.26 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › HisKA | 0.74 | 50.0 | 4.63e-01 | 70.0% | 74.7% |
| 5014744 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.73 | 66.0 | 4.71e-01 | 100.0% | 50.9% |
| 5057656 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.73 | 63.0 | 4.67e-01 | 93.3% | 91.0% |
| 3557223 | 150.3.1.22 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine › PRF | 0.71 | 64.0 | 4.50e-01 | 100.0% | 52.8% |
| 4025954 | 3758.1.1.0 ↗ | alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins | 0.70 | 56.0 | 3.67e-01 | 86.7% | 64.8% |
| 3886430 | 150.3.1.8 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine › EPO_TPO | 0.69 | 62.0 | 4.54e-01 | 100.0% | 54.4% |
| 4996482 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.68 | 62.0 | 4.53e-01 | 100.0% | 56.8% |
| 4393704 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 61.0 | 3.59e-01 | 100.0% | 41.7% |
| 4975404 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.63 | 53.0 | 4.39e-01 | 98.3% | 67.0% |
| 3982010 | 605.1.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 | 0.62 | 42.0 | 3.66e-01 | 70.0% | 52.6% |
| 3934585 | 3755.3.1.465 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF21A | 0.62 | 50.0 | 3.76e-01 | 88.3% | 97.3% |
| 4384750 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.62 | 42.0 | 3.65e-01 | 70.0% | 81.1% |
| 4930292 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.62 | 42.0 | 4.03e-01 | 70.0% | 71.4% |
| 3240454 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.57 | 46.0 | 3.98e-01 | 93.3% | 87.0% |
| 4016635 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.57 | 40.0 | 3.43e-01 | 75.0% | 47.0% |
| 3926384 | 109.1.1.29 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › Tom37+GST_C_6 | 0.56 | 45.0 | 3.40e-01 | 91.7% | 74.8% |