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MF158042.1__ATE86126.1__Sd1_gp60__00059
Bact-VirMF158042.1__ATE86126.1__Sd1_gp60__00059
Identity
- Accession:
- MF158042 ↗
- Kingdom:
- phage
Quality
77.1
mean pLDDT
Taxonomy
TaxID: 2024313
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 31-105
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3sjqC00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.82 | 57.0 | 5.59e-01 | 72.0% | 96.2% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.80 | 55.0 | 5.47e-01 | 70.7% | 75.3% |
| 1rsoA01 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.75 | 42.0 | 5.03e-01 | 88.0% | 82.4% |
| 3nymA00 | 6.10.290.10 | Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.75 | 53.0 | 4.43e-01 | 73.3% | 50.8% |
| 4q20A01 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.73 | 51.0 | 4.99e-01 | 82.7% | 67.1% |
| 1wcrA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.71 | 47.0 | 4.21e-01 | 70.7% | 49.5% |
| 1rv2D04 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.64 | 43.0 | 4.44e-01 | 84.0% | 74.3% |
| 4ib4A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.64 | 55.0 | 3.68e-01 | 100.0% | 25.3% |
| 7ztbB01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.62 | 44.0 | 3.42e-01 | 74.7% | 89.6% |
| 1e2aA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.61 | 41.0 | 3.76e-01 | 70.7% | 52.9% |
| 5k3hB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.59 | 52.0 | 4.35e-01 | 100.0% | 78.9% |
| 3r31A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.58 | 43.0 | 3.04e-01 | 81.3% | 26.9% |
| 1zs3A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.57 | 53.0 | 3.97e-01 | 100.0% | 61.4% |
| 3r64A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.57 | 47.0 | 3.22e-01 | 92.0% | 70.9% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 42.0 | 3.56e-01 | 78.7% | 96.7% |
| 4i8qA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.56 | 50.0 | 3.32e-01 | 98.7% | 71.2% |
| 7lb8B01 | 1.10.3470.10 | Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC | 0.56 | 49.0 | 3.24e-01 | 97.3% | 94.6% |
| 4mo7A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 44.0 | 3.59e-01 | 86.7% | 76.1% |
| 7d3uC01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 43.0 | 3.84e-01 | 90.7% | 67.3% |
| 3ieiA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 43.0 | 2.84e-01 | 93.3% | 49.4% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4652719 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.80 | 56.0 | 5.10e-01 | 72.0% | 70.5% |
| 3757869 | 4006.1.1.0 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain | 0.80 | 53.0 | 4.85e-01 | 82.7% | 53.7% |
| 2141223 | 5055.1.1.1 ↗ | extended segments › Small-conductance potassium channel › Small-conductance potassium channel › Small-conductance potassium channel › CaMBD | 0.69 | 47.0 | 4.32e-01 | 70.7% | 56.8% |
| 3485047 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.68 | 62.0 | 4.01e-01 | 100.0% | 23.4% |
| 3772175 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.67 | 56.0 | 3.65e-01 | 100.0% | 21.2% |
| 3180119 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.67 | 46.0 | 4.46e-01 | 72.0% | 63.5% |
| 3988387 | 604.10.1.1 ↗ | alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac › PTS_IIA | 0.67 | 45.0 | 4.14e-01 | 70.7% | 53.0% |
| 5030654 | 5073.1.1.11 ↗ | alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain M › Cation_ATPase_C | 0.65 | 52.0 | 3.07e-01 | 85.3% | 11.5% |
| 4620542 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.63 | 54.0 | 3.48e-01 | 100.0% | 21.2% |
| 3185172 | 3924.1.1.1 ↗ | alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Fungal_trans_2 | 0.63 | 50.0 | 3.55e-01 | 96.0% | 29.8% |
| 3228068 | 5001.1.1.45 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Sra | 0.62 | 55.0 | 3.61e-01 | 100.0% | 74.2% |
| None | — | 0.62 | 56.0 | 3.65e-01 | 100.0% | 77.8% | |
| 3444497 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.61 | 48.0 | 3.31e-01 | 86.7% | 70.7% |
| 3616130 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.60 | 44.0 | 3.20e-01 | 77.3% | 57.6% |
| 5008040 | 101.1.2.951 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF29259 | 0.59 | 46.0 | 3.92e-01 | 85.3% | 58.4% |
| 3699813 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 53.0 | 3.31e-01 | 98.7% | 31.9% |
| 4026926 | 604.7.1.1 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA | 0.58 | 50.0 | 4.17e-01 | 97.3% | 76.3% |
| 3701224 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.57 | 41.0 | 3.48e-01 | 88.0% | 44.8% |
| 3612568 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 50.0 | 3.18e-01 | 96.0% | 36.2% |
| 3504131 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.56 | 52.0 | 3.35e-01 | 100.0% | 74.1% |
| 4338761 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.55 | 42.0 | 2.94e-01 | 82.7% | 80.8% |