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MF158044.1__ATE86409.1__Sf18_gp135__00135
Bact-VirMF158044.1__ATE86409.1__Sf18_gp135__00135
Identity
- Accession:
- MF158044 ↗
- Kingdom:
- phage
Quality
86.5
mean pLDDT
Taxonomy
TaxID: 2024319
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-82
Domain cluster:
rep: MT740307.1__QNR53874.1__phiK7A1_086__00084__D3-88
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vm9A02 | 6.10.140.2110 | Special › Helix non-globular › Helix Hairpins › | 0.67 | 45.0 | 5.15e-01 | 83.7% | 98.2% |
| 2ktmA00 | 1.10.790.10 | Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain | 0.67 | 51.0 | 5.52e-01 | 85.0% | 95.6% |
| 3v9rA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.66 | 46.0 | 4.51e-01 | 72.5% | 65.9% |
| 1otkA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.64 | 45.0 | 3.17e-01 | 85.0% | 24.2% |
| 3besR03 | 6.10.140.1480 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 40.0 | 4.66e-01 | 77.5% | 91.1% |
| 1pd3A00 | 1.10.287.230 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.62 | 39.0 | 4.65e-01 | 75.0% | 94.4% |
| 4oxwA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.62 | 40.0 | 3.68e-01 | 86.3% | 50.0% |
| 1xteA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.61 | 40.0 | 3.53e-01 | 90.0% | 46.6% |
| 2c5iT00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 41.0 | 3.92e-01 | 87.5% | 58.5% |
| 2bskB00 | 1.10.287.810 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains | 0.60 | 43.0 | 4.70e-01 | 91.3% | 93.8% |
| 1yg2A02 | 6.10.140.190 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 44.0 | 4.27e-01 | 98.8% | 70.0% |
| 3i3lA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 52.0 | 3.29e-01 | 100.0% | 80.9% |
| 3rq9A00 | 1.10.287.2500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 43.0 | 4.43e-01 | 85.0% | 80.8% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.58 | 51.0 | 4.53e-01 | 100.0% | 86.3% |
| 2honA02 | 1.20.1250.30 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.57 | 40.0 | 3.36e-01 | 75.0% | 75.3% |
| 4fwvA02 | 1.20.120.1680 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.57 | 49.0 | 4.11e-01 | 95.0% | 76.9% |
| 1fioA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 50.0 | 3.77e-01 | 98.8% | 95.8% |
| 1hx8A02 | 1.20.58.150 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › ANTH domain | 0.56 | 44.0 | 3.89e-01 | 85.0% | 60.7% |
| 2ycdA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.55 | 44.0 | 3.86e-01 | 86.3% | 76.9% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.55 | 46.0 | 4.23e-01 | 95.0% | 71.6% |
| 2efkA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.53 | 46.0 | 3.24e-01 | 98.8% | 53.4% |
| 2mpkA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.52 | 37.0 | 3.84e-01 | 75.0% | 82.4% |
| 3t5vA00 | 1.25.40.990 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 40.0 | 2.81e-01 | 87.5% | 38.1% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4988108 | 1049.2.1.0 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain | 0.94 | 86.0 | 7.71e-01 | 96.2% | 73.3% |
| 4957574 | 1049.2.1.0 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain | 0.90 | 75.0 | 6.99e-01 | 98.8% | 73.7% |
| 3943565 | 1049.2.1.0 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain | 0.89 | 83.0 | 7.37e-01 | 100.0% | 72.7% |
| 3981239 | 1049.2.1.3 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain › PF26776 | 0.87 | 75.0 | 7.08e-01 | 95.0% | 77.9% |
| 3973303 | 1049.2.1.3 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain › PF26776 | 0.86 | 76.0 | 6.61e-01 | 95.0% | 67.8% |
| 4059302 | 1049.2.1.0 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain | 0.85 | 71.0 | 6.54e-01 | 91.3% | 71.0% |
| 3948958 | 1049.2.1.0 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain | 0.85 | 74.0 | 6.76e-01 | 95.0% | 72.4% |
| 4514735 | 1049.2.1.4 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain › Baseplate_J | 0.82 | 69.0 | 5.18e-01 | 97.5% | 38.4% |
| 5002735 | 1049.2.1.0 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain | 0.80 | 63.0 | 5.92e-01 | 95.0% | 70.5% |
| 4888809 | 1049.2.1.1 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain › Gp6-like_1st | 0.76 | 67.0 | 5.81e-01 | 100.0% | 70.4% |
| 3903368 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.66 | 51.0 | 4.11e-01 | 82.5% | 70.0% |
| 3393637 | 4957.1.1.0 ↗ | a+b complex topology › helical domain in yeast RNA-polymerases › third helical domain in yeast RNA-polymerase II beta-prime subunit › third helical domain in yeast RNA-polymerase II beta-prime subunit | 0.65 | 41.0 | 3.67e-01 | 72.5% | 44.3% |
| 1502536 | 150.7.1.2 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PE › PE › EspB_PE | 0.63 | 44.0 | 4.61e-01 | 97.5% | 78.7% |
| 1489902 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.62 | 40.0 | 3.68e-01 | 86.3% | 50.0% |
| 1068675 | 3714.1.1.0 ↗ | a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain | 0.61 | 51.0 | 3.97e-01 | 91.3% | 60.1% |
| 5024787 | 7064.1.1.0 ↗ | alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 | 0.59 | 52.0 | 4.22e-01 | 98.8% | 69.3% |
| 3783181 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.57 | 39.0 | 3.51e-01 | 86.3% | 50.9% |
| 3886069 | 529.1.1.1 ↗ | few secondary structure elements › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) › ANATO | 0.57 | 46.0 | 4.06e-01 | 87.5% | 65.2% |
| 3607313 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 45.0 | 3.61e-01 | 85.0% | 68.4% |
| 3197548 | 3755.2.1.0 ↗ | alpha bundles › YscO-like › Flagellar FliJ protein › Flagellar FliJ protein | 0.56 | 45.0 | 3.63e-01 | 96.2% | 46.0% |
| 3306718 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.53 | 48.0 | 3.55e-01 | 100.0% | 48.3% |
| 3778661 | 109.23.1.9 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal domain in vacuolar protein sorting-associated protein 54 › C-terminal domain in vacuolar protein sorting-associated protein 54 › ANATO | 0.53 | 43.0 | 3.84e-01 | 88.7% | 65.8% |
| 4105315 | 5000.6.1.1 ↗ | alpha arrays › Toxins' membrane translocation domains › Tethering factor for nuclear proteasome cut8 › Tethering factor for nuclear proteasome cut8 › Cut8 | 0.51 | 44.0 | 3.42e-01 | 96.2% | 61.6% |
D2
high
residues 92-261
Domain cluster:
rep: KY065149.1__APD18158.1__X__00034__D151-326
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3l4gB03 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.65 | 26.0 | 3.87e-01 | 71.2% | 83.8% |
| 4nx9A02 | 2.60.40.4390 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 43.0 | 5.01e-01 | 87.6% | 93.4% |
| 2zbiA02 | 3.30.70.2120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 40.0 | 4.84e-01 | 87.6% | 98.2% |
| 3jcmH04 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.62 | 29.0 | 4.22e-01 | 75.3% | 97.4% |
| 2gk6A02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.62 | 28.0 | 3.79e-01 | 95.3% | 83.1% |
| 4qmfB01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.61 | 27.0 | 3.83e-01 | 72.9% | 85.4% |
| 2xzlA02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.61 | 26.0 | 3.61e-01 | 94.7% | 81.0% |
| 1tuaA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.59 | 27.0 | 3.76e-01 | 73.5% | 86.9% |
| 4e9jA02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.58 | 25.0 | 3.78e-01 | 72.9% | 97.1% |
| 3e3xA01 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.58 | 33.0 | 3.96e-01 | 72.9% | 84.1% |
| 4w8jA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 28.0 | 2.93e-01 | 100.0% | 47.4% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 24.0 | 3.64e-01 | 76.5% | 100.0% |
| 2lu2A00 | 3.30.70.2380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 29.0 | 3.94e-01 | 96.5% | 100.0% |
| 3u1kB04 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.56 | 26.0 | 3.72e-01 | 74.7% | 100.0% |
| 1w9sA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 27.0 | 3.04e-01 | 100.0% | 56.7% |
| 3c0wA02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.54 | 26.0 | 3.33e-01 | 77.6% | 75.7% |
| 3t30C00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.51 | 30.0 | 3.77e-01 | 78.8% | 100.0% |
| 1xe0C00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.51 | 31.0 | 3.84e-01 | 78.8% | 100.0% |
| 4devD01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 36.0 | 4.17e-01 | 78.8% | 99.2% |
| 4xvhA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 30.0 | 3.73e-01 | 74.7% | 95.3% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3946545 | 1.1.8.21 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Baseplate_J | 0.96 | 43.0 | 6.38e-01 | 100.0% | 90.6% |
| 3947742 | 1.1.8.21 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Baseplate_J | 0.95 | 42.0 | 6.26e-01 | 100.0% | 89.4% |
| 4514735 | 1049.2.1.4 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain › Baseplate_J | 0.87 | 41.0 | 3.94e-01 | 100.0% | 41.6% |
| 4580145 | 1.1.8.21 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Baseplate_J | 0.80 | 38.0 | 5.31e-01 | 98.8% | 90.6% |
| 3166067 | 3019.1.1.7 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Phage_sheath_domII | 0.73 | 45.0 | 5.67e-01 | 78.2% | 100.0% |
| 3966404 | 3019.1.1.1 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN | 0.65 | 39.0 | 4.56e-01 | 73.5% | 83.3% |
| 3839595 | 3019.1.1.1 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN | 0.63 | 40.0 | 4.93e-01 | 80.0% | 100.0% |
| 5038997 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.60 | 25.0 | 3.92e-01 | 94.7% | 100.0% |
| 4307366 | 3019.1.1.0 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain | 0.60 | 39.0 | 4.75e-01 | 78.2% | 100.0% |
| 4206669 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.59 | 24.0 | 3.69e-01 | 74.1% | 92.9% |
| 3272707 | 327.11.2.39 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_PARP14_3 | 0.58 | 24.0 | 3.67e-01 | 74.1% | 95.4% |
| 4563845 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.58 | 26.0 | 3.84e-01 | 75.9% | 100.0% |
| 4929087 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.58 | 31.0 | 3.82e-01 | 75.9% | 80.9% |
| 5031484 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.56 | 25.0 | 3.31e-01 | 73.5% | 74.4% |
| 5001328 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.55 | 25.0 | 3.33e-01 | 72.9% | 80.0% |
| 4163010 | 305.2.1.1 ↗ | a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a | 0.53 | 31.0 | 3.89e-01 | 74.7% | 100.0% |
| 5056360 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.52 | 28.0 | 3.71e-01 | 74.1% | 94.7% |
| 4640230 | 306.8.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › TM1457-like › TM1457-like › Peptidase_Prp | 0.50 | 28.0 | 3.60e-01 | 73.5% | 96.8% |