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MF172979.1__ASD51131.1__SER90K_74__00074
Bact-VirMF172979.1__ASD51131.1__SER90K_74__00074
Identity
- Accession:
- MF172979 ↗
- Kingdom:
- phage
Quality
97.4
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-107
Domain cluster:
rep: OK624832.1__UFK09547.1__X__00022__D2-97
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04229.21 best | GrpB | 98.3 | 7.60e-28 | 100.0% | 59.1% |
CATH (66)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nrkA00 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.99 | 97.0 | 7.78e-01 | 100.0% | 59.4% |
| 1knyA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.81 | 61.0 | 5.58e-01 | 100.0% | 61.6% |
| 4ebjA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.78 | 61.0 | 5.47e-01 | 100.0% | 61.7% |
| 3b0xA03 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.74 | 63.0 | 6.23e-01 | 100.0% | 86.7% |
| 7lt2A01 | 3.30.460.90 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.74 | 67.0 | 4.99e-01 | 100.0% | 85.3% |
| 7qprA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.74 | 67.0 | 6.02e-01 | 100.0% | 87.4% |
| 4fh3A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.73 | 65.0 | 6.03e-01 | 100.0% | 87.2% |
| 2rffA00 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.73 | 56.0 | 5.36e-01 | 100.0% | 71.2% |
| 4zrlA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.72 | 65.0 | 6.13e-01 | 100.0% | 95.7% |
| 6iw6A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.72 | 66.0 | 6.39e-01 | 100.0% | 97.2% |
| 6ywnA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.72 | 64.0 | 6.25e-01 | 100.0% | 98.1% |
| 3hj4A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.72 | 64.0 | 5.86e-01 | 100.0% | 87.8% |
| 1vj7B02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.70 | 63.0 | 5.93e-01 | 98.0% | 90.8% |
| 2ihmB03 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.70 | 62.0 | 5.91e-01 | 96.9% | 99.1% |
| 7x4pA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.70 | 62.0 | 5.31e-01 | 98.0% | 89.8% |
| 8an5A01 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.70 | 62.0 | 5.01e-01 | 99.0% | 90.1% |
| 4s3nA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.70 | 62.0 | 5.43e-01 | 100.0% | 83.7% |
| 3c18A01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.69 | 50.0 | 4.78e-01 | 95.9% | 64.3% |
| 4huzA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.69 | 52.0 | 4.46e-01 | 78.6% | 89.4% |
| 3wfoA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.69 | 62.0 | 5.31e-01 | 100.0% | 68.8% |
| 3p8aA02 | 2.60.40.4320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.69 | 42.0 | 4.37e-01 | 100.0% | 65.6% |
| 3jyyA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.68 | 59.0 | 5.35e-01 | 100.0% | 70.1% |
| 5hr9A01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.68 | 61.0 | 5.91e-01 | 98.0% | 94.4% |
| 1r89A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.67 | 60.0 | 5.52e-01 | 100.0% | 84.4% |
| 1zswA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.66 | 49.0 | 4.29e-01 | 78.6% | 90.7% |
| 1no5B00 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.66 | 51.0 | 5.08e-01 | 100.0% | 79.4% |
| 1kw3B02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.64 | 49.0 | 4.25e-01 | 82.7% | 87.7% |
| 2r5vA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.64 | 48.0 | 4.16e-01 | 79.6% | 90.7% |
| 3e0rB01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.63 | 48.0 | 4.54e-01 | 80.6% | 100.0% |
| 1zswA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.63 | 49.0 | 4.06e-01 | 84.7% | 73.0% |
| 3b59A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.62 | 47.0 | 4.42e-01 | 80.6% | 100.0% |
| 1sp8C01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.62 | 49.0 | 4.02e-01 | 84.7% | 87.4% |
| 4o8sA01 | 3.10.450.620 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › JHP933, nucleotidyltransferase-like core domain | 0.61 | 54.0 | 5.04e-01 | 100.0% | 86.4% |
| 1mpyA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.61 | 47.0 | 4.09e-01 | 82.7% | 83.9% |
| 1f1uA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.60 | 47.0 | 4.16e-01 | 84.7% | 83.8% |
| 4alzA01 | 3.30.1340.30 | Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › | 0.60 | 38.0 | 4.43e-01 | 90.8% | 100.0% |
| 4lqbA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.59 | 45.0 | 4.13e-01 | 80.6% | 86.9% |
| 3lm4A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.59 | 44.0 | 4.02e-01 | 79.6% | 86.8% |
| 3rmuA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.59 | 45.0 | 4.05e-01 | 80.6% | 100.0% |
| 2e8eA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.58 | 52.0 | 4.75e-01 | 99.0% | 74.2% |
| 1wotA00 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.58 | 46.0 | 4.69e-01 | 100.0% | 86.7% |
| 1wmiA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.58 | 37.0 | 3.91e-01 | 100.0% | 71.6% |
| 1sqiA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.58 | 45.0 | 3.85e-01 | 84.7% | 86.2% |
| 2dhmA01 | 3.30.300.90 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like | 0.58 | 46.0 | 4.77e-01 | 99.0% | 93.3% |
| 2otrA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.57 | 34.0 | 3.56e-01 | 99.0% | 63.3% |
| 6bu2A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.57 | 45.0 | 3.97e-01 | 85.7% | 93.3% |
| 4r2xD00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.57 | 36.0 | 2.67e-01 | 70.4% | 24.5% |
| 3r4qA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.57 | 50.0 | 4.58e-01 | 100.0% | 94.7% |
| 2kc8A00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.57 | 35.0 | 3.55e-01 | 100.0% | 62.1% |
| 3oa4A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.57 | 42.0 | 3.88e-01 | 80.6% | 100.0% |
| 3ghjA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.56 | 49.0 | 4.71e-01 | 99.0% | 91.4% |
| 2mjlA00 | 3.40.50.1470 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidyl-tRNA hydrolase | 0.56 | 40.0 | 3.20e-01 | 100.0% | 37.1% |
| 2qqzA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.56 | 48.0 | 4.63e-01 | 96.9% | 90.4% |
| 4g6xA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.56 | 48.0 | 4.44e-01 | 98.0% | 92.2% |
| 3p8aA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.55 | 42.0 | 3.60e-01 | 81.6% | 96.2% |
| 6s6yD02 | 3.30.70.520 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 47.0 | 4.20e-01 | 99.0% | 92.1% |
| 6lpnA03 | 3.30.70.2190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 48.0 | 4.56e-01 | 99.0% | 82.5% |
| 1xqaA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.54 | 46.0 | 4.49e-01 | 96.9% | 93.6% |
| 4hc5D00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.54 | 46.0 | 4.24e-01 | 98.0% | 86.3% |
| 2rk0A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.53 | 46.0 | 4.33e-01 | 98.0% | 98.3% |
| 1ss4A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.53 | 46.0 | 4.05e-01 | 98.0% | 92.6% |
| 1r9cA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 44.0 | 4.15e-01 | 98.0% | 89.6% |
| 3kolA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 44.0 | 4.05e-01 | 96.9% | 97.0% |
| 1twuA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 45.0 | 4.08e-01 | 100.0% | 86.9% |
| 3qpbF00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.50 | 36.0 | 2.78e-01 | 76.5% | 98.8% |
| 2p25A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.50 | 43.0 | 4.09e-01 | 94.9% | 99.2% |
ECOD (96)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3274187 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.93 | 90.0 | 7.18e-01 | 100.0% | 57.6% |
| 4982092 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.92 | 88.0 | 7.16e-01 | 100.0% | 61.2% |
| 4173504 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.92 | 87.0 | 7.07e-01 | 100.0% | 60.9% |
| 3969473 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.89 | 84.0 | 6.89e-01 | 100.0% | 61.8% |
| 2419127 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.89 | 84.0 | 6.32e-01 | 100.0% | 58.0% |
| 4583055 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.89 | 80.0 | 6.62e-01 | 100.0% | 58.1% |
| 4032285 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.88 | 84.0 | 6.85e-01 | 100.0% | 61.8% |
| 3732913 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.88 | 83.0 | 6.65e-01 | 100.0% | 59.4% |
| 4426543 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.86 | 81.0 | 6.47e-01 | 100.0% | 56.1% |
| 3689215 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.86 | 81.0 | 6.40e-01 | 100.0% | 57.8% |
| 3520245 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.86 | 81.0 | 6.53e-01 | 100.0% | 59.4% |
| 3733520 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.85 | 80.0 | 6.37e-01 | 100.0% | 55.0% |
| 4481605 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.84 | 76.0 | 6.39e-01 | 100.0% | 61.3% |
| 4972596 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.83 | 78.0 | 6.41e-01 | 100.0% | 61.2% |
| 5021551 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.82 | 77.0 | 6.41e-01 | 100.0% | 62.5% |
| 5038425 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.82 | 65.0 | 6.38e-01 | 100.0% | 77.1% |
| 5057929 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.81 | 61.0 | 5.67e-01 | 100.0% | 64.2% |
| 5071890 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.81 | 61.0 | 5.32e-01 | 100.0% | 55.0% |
| 5030913 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.78 | 63.0 | 5.33e-01 | 100.0% | 54.2% |
| 5000146 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.77 | 60.0 | 5.42e-01 | 100.0% | 61.5% |
| 3244701 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.77 | 69.0 | 5.61e-01 | 98.0% | 58.9% |
| 5030773 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.77 | 60.0 | 5.18e-01 | 100.0% | 54.7% |
| 4992530 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.77 | 61.0 | 6.05e-01 | 99.0% | 79.8% |
| 4028294 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.76 | 67.0 | 6.08e-01 | 95.9% | 79.2% |
| 5076994 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.76 | 63.0 | 6.16e-01 | 100.0% | 81.7% |
| 4972593 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.76 | 57.0 | 5.52e-01 | 99.0% | 70.9% |
| 4937381 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.75 | 59.0 | 5.94e-01 | 96.9% | 81.0% |
| 5082137 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.75 | 61.0 | 5.78e-01 | 100.0% | 73.0% |
| 2138154 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.75 | 65.0 | 5.46e-01 | 100.0% | 57.7% |
| 5028076 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.75 | 64.0 | 5.52e-01 | 100.0% | 61.4% |
| 5078640 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.75 | 57.0 | 5.71e-01 | 98.0% | 79.0% |
| 5008179 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.74 | 57.0 | 5.70e-01 | 99.0% | 79.0% |
| 3245039 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.74 | 67.0 | 5.50e-01 | 100.0% | 78.9% |
| 4937758 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.74 | 57.0 | 5.79e-01 | 100.0% | 83.2% |
| 4993512 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.74 | 59.0 | 5.64e-01 | 99.0% | 73.7% |
| 4937865 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.73 | 58.0 | 5.66e-01 | 100.0% | 78.1% |
| 5032022 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.73 | 60.0 | 5.86e-01 | 100.0% | 81.0% |
| 3744790 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.73 | 66.0 | 6.24e-01 | 100.0% | 87.8% |
| 3945042 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.72 | 60.0 | 5.17e-01 | 96.9% | 58.0% |
| 3212735 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.72 | 65.0 | 5.54e-01 | 100.0% | 80.0% |
| 4944618 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.72 | 65.0 | 6.21e-01 | 100.0% | 88.7% |
| 4482185 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.72 | 62.0 | 5.28e-01 | 100.0% | 58.7% |
| 4013426 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.72 | 63.0 | 6.15e-01 | 95.9% | 96.2% |
| 4091476 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.72 | 62.0 | 5.26e-01 | 100.0% | 58.7% |
| 5072129 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.72 | 65.0 | 5.80e-01 | 99.0% | 78.5% |
| 3184683 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.72 | 65.0 | 5.70e-01 | 100.0% | 82.8% |
| 4944781 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.72 | 59.0 | 5.68e-01 | 100.0% | 78.2% |
| 4022333 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.72 | 59.0 | 5.38e-01 | 100.0% | 68.0% |
| 4415129 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.71 | 60.0 | 5.14e-01 | 100.0% | 57.4% |
| 3264956 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.71 | 64.0 | 5.93e-01 | 100.0% | 78.4% |
| 3504326 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.71 | 64.0 | 5.65e-01 | 100.0% | 80.0% |
| 5052875 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.71 | 57.0 | 5.67e-01 | 99.0% | 81.6% |
| 5074409 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.71 | 57.0 | 5.01e-01 | 100.0% | 59.3% |
| 1952984 | 316.1.1.23 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DNA_pol_B_thumb | 0.71 | 65.0 | 5.31e-01 | 100.0% | 58.8% |
| 4984735 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.71 | 57.0 | 5.10e-01 | 100.0% | 62.2% |
| 3739127 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.71 | 64.0 | 5.66e-01 | 100.0% | 75.7% |
| 4970363 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.71 | 58.0 | 5.66e-01 | 100.0% | 81.0% |
| 4960071 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.71 | 53.0 | 5.16e-01 | 90.8% | 72.4% |
| 5072488 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.71 | 55.0 | 5.47e-01 | 96.9% | 78.8% |
| 4938037 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.71 | 56.0 | 5.50e-01 | 100.0% | 79.0% |
| 5054501 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.70 | 59.0 | 4.94e-01 | 100.0% | 55.0% |
| 5039133 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.69 | 57.0 | 5.64e-01 | 100.0% | 82.9% |
| 5078678 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.69 | 54.0 | 5.33e-01 | 100.0% | 78.1% |
| 5052912 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.69 | 56.0 | 4.99e-01 | 100.0% | 61.4% |
| 5031013 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.69 | 49.0 | 4.65e-01 | 93.9% | 62.6% |
| 5028445 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.69 | 53.0 | 5.13e-01 | 100.0% | 74.1% |
| 5039191 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.69 | 55.0 | 5.39e-01 | 100.0% | 78.7% |
| 5012868 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.68 | 52.0 | 4.87e-01 | 100.0% | 65.8% |
| 4993097 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.68 | 51.0 | 4.91e-01 | 100.0% | 70.0% |
| 4986446 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.68 | 54.0 | 5.27e-01 | 100.0% | 78.1% |
| 4941550 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.68 | 57.0 | 5.36e-01 | 100.0% | 74.2% |
| 5055016 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.68 | 61.0 | 4.78e-01 | 99.0% | 55.1% |
| 4323659 | 211.1.1.54 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › PF27226 | 0.67 | 55.0 | 5.64e-01 | 96.9% | 91.6% |
| 4969949 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.67 | 60.0 | 4.81e-01 | 100.0% | 56.4% |
| 5039586 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.67 | 53.0 | 5.21e-01 | 100.0% | 79.0% |
| 4933311 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.67 | 54.0 | 4.65e-01 | 100.0% | 56.7% |
| 4989993 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.66 | 52.0 | 4.85e-01 | 100.0% | 68.3% |
| 4084096 | 316.1.1.60 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2, DUF294 | 0.66 | 52.0 | 4.57e-01 | 100.0% | 56.7% |
| 5073398 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.66 | 57.0 | 4.90e-01 | 100.0% | 61.3% |
| 4969921 | 327.2.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › BolA-like › BolA-like › NTP_transf_2 | 0.65 | 54.0 | 5.18e-01 | 100.0% | 79.1% |
| 3965150 | 316.1.1.43 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF294 | 0.64 | 52.0 | 4.57e-01 | 100.0% | 58.0% |
| 4642209 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.64 | 52.0 | 4.57e-01 | 100.0% | 58.0% |
| 5073006 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.64 | 58.0 | 4.89e-01 | 100.0% | 60.0% |
| 5051070 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.64 | 58.0 | 4.98e-01 | 100.0% | 63.2% |
| 4934691 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.64 | 49.0 | 4.88e-01 | 99.0% | 80.0% |
| 4938200 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.64 | 56.0 | 4.73e-01 | 100.0% | 58.7% |
| 2430320 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.63 | 44.0 | 4.98e-01 | 99.0% | 97.2% |
| 4968136 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.62 | 56.0 | 4.72e-01 | 100.0% | 60.0% |
| None | — | 0.60 | 46.0 | 4.10e-01 | 81.6% | 96.5% | |
| 5005089 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.59 | 47.0 | 4.76e-01 | 100.0% | 86.0% |
| 3499697 | 211.1.1.7 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase_4 | 0.57 | 44.0 | 3.93e-01 | 84.7% | 98.6% |
| 1179385 | 316.1.1.7 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Pox_polyA_pol | 0.56 | 49.0 | 4.11e-01 | 99.0% | 55.5% |
| 4034132 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.56 | 49.0 | 3.94e-01 | 100.0% | 55.6% |
| 3927360 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.56 | 44.0 | 4.74e-01 | 87.8% | 98.8% |
| 5078270 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.55 | 48.0 | 4.32e-01 | 96.9% | 80.7% |
| 4967551 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.54 | 48.0 | 4.53e-01 | 95.9% | 86.1% |
D2
high
residues 111-171
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04229.21 best | GrpB | 49.2 | 9.60e-13 | 86.9% | 32.1% |
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nrkA00 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.98 | 89.0 | 6.21e-01 | 98.4% | 35.2% |
| 3k17A02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.75 | 61.0 | 4.70e-01 | 91.8% | 45.7% |
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.72 | 54.0 | 4.25e-01 | 85.2% | 37.6% |
| 4e4eA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.71 | 52.0 | 4.99e-01 | 85.2% | 67.6% |
| 3ihmA03 | 6.10.250.650 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.71 | 51.0 | 5.62e-01 | 93.4% | 95.9% |
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.70 | 52.0 | 4.97e-01 | 82.0% | 83.8% |
| 3k66A01 | 1.20.120.770 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Amyloid precursor protein, E2 domain | 0.69 | 51.0 | 3.57e-01 | 80.3% | 24.9% |
| 2wgmA01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.68 | 52.0 | 4.78e-01 | 85.2% | 65.9% |
| 1t72A02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.68 | 48.0 | 4.21e-01 | 85.2% | 48.0% |
| 4h63H01 | 1.20.58.1710 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 50.0 | 4.83e-01 | 82.0% | 72.2% |
| 2x2vA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.67 | 52.0 | 5.12e-01 | 86.9% | 92.6% |
| 2d2sA01 | 1.20.58.1210 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, N-terminal helical domain | 0.67 | 49.0 | 4.00e-01 | 78.7% | 41.4% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.67 | 50.0 | 4.87e-01 | 85.2% | 73.1% |
| 1wa8A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.67 | 50.0 | 4.25e-01 | 80.3% | 52.5% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 50.0 | 4.76e-01 | 85.2% | 69.0% |
| 2e62A01 | 6.10.140.420 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 46.0 | 4.86e-01 | 75.4% | 92.3% |
| 3h36A00 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.66 | 51.0 | 4.68e-01 | 83.6% | 73.1% |
| 1grjA01 | 1.10.287.180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain | 0.65 | 49.0 | 4.70e-01 | 85.2% | 70.3% |
| 3frrA00 | 1.20.1260.60 | Mainly Alpha › Up-down Bundle › Ferritin › Vacuolar protein sorting-associated protein Ist1 | 0.64 | 49.0 | 3.53e-01 | 85.2% | 28.5% |
| 1hr5A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.64 | 42.0 | 4.58e-01 | 80.3% | 87.5% |
| 2fb5A01 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.63 | 50.0 | 4.75e-01 | 85.2% | 76.4% |
| 3ehfD01 | 1.20.5.1930 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.62 | 47.0 | 4.73e-01 | 83.6% | 85.7% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.62 | 47.0 | 4.48e-01 | 86.9% | 85.9% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 46.0 | 4.10e-01 | 85.2% | 90.6% |
| 4gzrC00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.61 | 44.0 | 4.49e-01 | 82.0% | 80.3% |
| 2vkzA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.61 | 54.0 | 3.54e-01 | 100.0% | 50.0% |
| 3bvxA02 | 1.20.1270.50 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Glycoside hydrolase family 38, central domain | 0.61 | 50.0 | 4.21e-01 | 95.1% | 67.6% |
| 1wncB00 | 1.20.5.300 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.61 | 45.0 | 4.16e-01 | 82.0% | 77.8% |
| 2uv8A07 | 6.10.140.1410 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 45.0 | 4.13e-01 | 86.9% | 64.7% |
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 44.0 | 4.17e-01 | 80.3% | 69.9% |
| 5svlA01 | 1.10.287.940 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › atp-gated p2x4 ion channel | 0.59 | 45.0 | 4.39e-01 | 86.9% | 79.4% |
| 2dnaA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.58 | 35.0 | 3.44e-01 | 77.0% | 53.7% |
| 3b4qA00 | 1.10.1200.100 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › conserved protein domain from corynebacterium diphtheriae | 0.57 | 46.0 | 4.12e-01 | 88.5% | 88.5% |
| 4i3vA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.55 | 44.0 | 2.87e-01 | 85.2% | 55.4% |
| 2btqB03 | 1.10.287.600 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.53 | 40.0 | 4.15e-01 | 83.6% | 98.1% |
| 2i5uA00 | 1.10.10.630 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DnaD domain-like | 0.52 | 41.0 | 3.84e-01 | 85.2% | 71.4% |
| 4m70B00 | 1.10.246.200 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain | 0.52 | 42.0 | 3.85e-01 | 98.4% | 80.2% |
| 2mqkA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.52 | 44.0 | 4.36e-01 | 96.7% | 100.0% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3274187 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.99 | 96.0 | 6.59e-01 | 100.0% | 35.9% |
| 5021551 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.93 | 76.0 | 5.43e-01 | 86.9% | 33.1% |
| 3969473 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.91 | 77.0 | 5.45e-01 | 91.8% | 33.3% |
| 3520245 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.90 | 79.0 | 5.52e-01 | 95.1% | 33.7% |
| 2419127 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.88 | 80.0 | 5.37e-01 | 100.0% | 28.8% |
| 3950145 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.86 | 76.0 | 5.17e-01 | 100.0% | 28.4% |
| 4583055 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.82 | 71.0 | 5.15e-01 | 98.4% | 36.3% |
| 136620 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.75 | 61.0 | 4.61e-01 | 91.8% | 42.7% |
| 3570117 | 375.6.1.2 ↗ | few secondary structure elements › Rubredoxin-like › FlhC-like › FlhC-like › PF31275 | 0.72 | 54.0 | 5.43e-01 | 80.3% | 85.0% |
| 3170489 | 7558.1.1.11 ↗ | a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Acyltransferase,Acyltransf_C | 0.72 | 53.0 | 3.35e-01 | 80.3% | 74.6% |
| 3218921 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.71 | 50.0 | 4.12e-01 | 73.8% | 43.1% |
| 3256881 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.70 | 52.0 | 3.98e-01 | 80.3% | 60.7% |
| 3280093 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.70 | 57.0 | 4.29e-01 | 91.8% | 42.6% |
| 1147932 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.70 | 51.0 | 4.69e-01 | 82.0% | 63.5% |
| 3947564 | 605.1.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 | 0.68 | 51.0 | 5.04e-01 | 82.0% | 76.9% |
| 3854287 | 611.12.1.4 ↗ | alpha bundles › N-cbl like › Izumo sperm-egg fusion protein 1 N-terminal domain › Izumo sperm-egg fusion protein 1 N-terminal domain › PF31275 | 0.68 | 59.0 | 4.50e-01 | 98.4% | 87.6% |
| 5006528 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.68 | 48.0 | 4.58e-01 | 77.0% | 82.7% |
| 3614353 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.68 | 49.0 | 4.27e-01 | 80.3% | 51.0% |
| 3798232 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.68 | 51.0 | 4.52e-01 | 80.3% | 59.1% |
| 3491418 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.67 | 50.0 | 4.65e-01 | 85.2% | 64.0% |
| 3617495 | 3860.1.1.0 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm | 0.67 | 51.0 | 4.66e-01 | 80.3% | 64.6% |
| 5041271 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.67 | 51.0 | 4.85e-01 | 85.2% | 88.0% |
| 3556027 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.67 | 49.0 | 4.44e-01 | 85.2% | 56.5% |
| 3855461 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.66 | 49.0 | 4.43e-01 | 85.2% | 56.5% |
| 4026417 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.66 | 50.0 | 4.72e-01 | 85.2% | 68.0% |
| 3902100 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.66 | 49.0 | 4.41e-01 | 85.2% | 56.5% |
| 4267024 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.64 | 49.0 | 4.65e-01 | 85.2% | 73.3% |
| 3545962 | 192.8.1.247 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Erf4 | 0.64 | 55.0 | 4.34e-01 | 98.4% | 91.5% |
| 4963338 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.63 | 46.0 | 4.68e-01 | 83.6% | 83.3% |
| 3290433 | 5058.1.1.16 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st_1 | 0.63 | 43.0 | 3.94e-01 | 75.4% | 51.1% |
| 5041060 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.62 | 45.0 | 4.31e-01 | 82.0% | 82.7% |
| 3964684 | 1075.1.1.2 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › LptF_LptG | 0.61 | 50.0 | 3.36e-01 | 91.8% | 59.2% |
| 3968516 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.61 | 46.0 | 4.37e-01 | 83.6% | 77.3% |
| 3860064 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.61 | 44.0 | 3.59e-01 | 100.0% | 40.0% |
| 2674763 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.61 | 46.0 | 4.38e-01 | 85.2% | 86.7% |
| 3940797 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.60 | 42.0 | 3.81e-01 | 73.8% | 56.0% |
| 3804522 | 1147.1.1.1 ↗ | alpha bundles › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › Occludin_ELL | 0.59 | 43.0 | 3.58e-01 | 80.3% | 41.7% |
| 3935505 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.58 | 41.0 | 3.80e-01 | 78.7% | 55.3% |
| 3344575 | 9.26.1.0 ↗ | beta barrels › Lipocalins/Streptavidin | 0.58 | 43.0 | 3.14e-01 | 85.2% | 26.7% |
| 3781928 | 304.1.1.0 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain | 0.58 | 49.0 | 3.62e-01 | 100.0% | 48.0% |
| 3260787 | 143.1.1.1 ↗ | alpha arrays › PABP domain-like › PABC(PABP) domain › PABC(PABP) domain › PABP | 0.54 | 36.0 | 3.42e-01 | 82.0% | 56.0% |