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MF176161.1__ARW58253.1__DeepPurple_gp002__00003

Bact-Vir

MF176161.1__ARW58253.1__DeepPurple_gp002__00003

Identity

Accession:
MF176161 ↗
Kingdom:
phage

Quality

87.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-181
PDB
D2 high residues 211-323
PDB
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1d0qA00 3.90.580.10 Alpha Beta › Alpha-Beta Complex › DNA Primase; Chain A › Zinc finger, CHC2-type domain 0.76 56.0 5.94e-01 77.9% 91.2%
1jssA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 42.0 3.50e-01 75.2% 75.4%
1zzmA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.50 37.0 2.83e-01 76.1% 100.0%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3587270 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.86 80.0 7.98e-01 99.1% 100.0%
4680318 375.1.1.15 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 0.79 58.0 6.48e-01 76.1% 100.0%
4166935 375.1.1.15 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 0.79 59.0 6.31e-01 77.9% 93.0%
8015 375.1.1.15 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 0.76 56.0 5.94e-01 77.9% 91.2%
4539347 375.1.1.15 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 0.75 58.0 6.20e-01 81.4% 96.0%
3943026 375.1.1.39 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Prim_Zn_Ribbon 0.75 53.0 5.40e-01 72.6% 82.6%
3356611 64.1.1.0 beta meanders › WW domain-like › WW domain › WW domain 0.73 28.0 3.95e-01 93.8% 72.7%
3709555 64.1.1.1 beta meanders › WW domain-like › WW domain › WW domain › WW 0.71 30.0 4.21e-01 84.1% 81.8%
3190898 64.1.1.1 beta meanders › WW domain-like › WW domain › WW domain › WW 0.69 26.0 4.09e-01 89.4% 95.0%
3056107 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.64 45.0 4.64e-01 72.6% 91.4%
3404585 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.61 24.0 3.51e-01 76.1% 80.0%
3519579 295.1.1.20 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › Intu_longin_3 0.56 32.0 3.67e-01 84.1% 77.5%
None 0.55 24.0 3.50e-01 81.4% 90.6%
3888040 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.54 30.0 3.66e-01 84.1% 85.7%
3985807 375.1.1.130 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_Tnp_IS1 0.53 23.0 3.44e-01 85.8% 100.0%
D3 high residues 327-476
PDB
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 35.0 5.37e-01 75.3% 100.0%
2nriB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 46.0 5.83e-01 94.0% 96.7%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 35.0 4.96e-01 76.7% 88.9%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 37.0 5.09e-01 76.7% 88.5%
2jt1A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 38.0 5.43e-01 76.0% 100.0%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 38.0 4.79e-01 80.7% 76.6%
6kf9G01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 43.0 5.65e-01 82.0% 100.0%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 42.0 4.33e-01 81.3% 56.3%
5tjjA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 38.0 5.37e-01 77.3% 98.6%
4yifF00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 37.0 3.98e-01 81.3% 53.8%
1jgsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 41.0 4.30e-01 80.0% 57.2%
1r1uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 38.0 4.84e-01 73.3% 79.6%
2a61B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 39.0 4.11e-01 82.0% 54.7%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 40.0 4.34e-01 78.7% 61.1%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 38.0 4.02e-01 80.7% 53.6%
2fa5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 37.0 3.86e-01 80.0% 51.1%
1ku9B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 40.0 5.16e-01 80.7% 89.7%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 40.0 5.39e-01 84.0% 100.0%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 36.0 4.88e-01 70.7% 86.4%
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 38.0 4.95e-01 80.7% 86.2%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 38.0 4.10e-01 80.0% 57.4%
5jbrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 39.0 5.04e-01 83.3% 89.5%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 38.0 4.19e-01 79.3% 60.5%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 39.0 4.96e-01 82.0% 86.5%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 40.0 4.06e-01 80.7% 53.0%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 37.0 3.74e-01 80.7% 48.3%
7cluA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 35.0 4.56e-01 70.0% 78.7%
4a6dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 39.0 4.92e-01 72.7% 84.0%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 47.0 5.52e-01 84.0% 92.3%
1lj9B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 40.0 4.14e-01 79.3% 56.3%
3pqkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 39.0 4.73e-01 76.7% 78.8%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 39.0 3.98e-01 79.3% 52.7%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 39.0 4.77e-01 84.0% 79.2%
3mczA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 35.0 4.70e-01 72.7% 85.4%
1ulyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 43.0 5.49e-01 90.7% 100.0%
3bpvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 41.0 4.28e-01 80.0% 60.6%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 38.0 4.98e-01 80.0% 91.8%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 38.0 4.71e-01 73.3% 81.7%
2d1hB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 44.0 5.34e-01 89.3% 93.9%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 39.0 4.07e-01 84.0% 56.0%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 39.0 3.96e-01 82.0% 54.1%
4xrfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 39.0 4.05e-01 79.3% 56.3%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 40.0 4.18e-01 80.7% 59.1%
2obpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 37.0 4.88e-01 77.3% 92.6%
2xkoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 37.0 4.65e-01 78.7% 81.9%
2h6bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 36.0 4.47e-01 77.3% 79.2%
2pexA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 36.0 3.80e-01 80.0% 55.1%
3k69A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 39.0 3.90e-01 76.0% 54.7%
2y75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 38.0 4.14e-01 83.3% 66.4%
4d7kA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 36.0 4.49e-01 72.0% 83.3%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 46.0 5.13e-01 86.0% 89.2%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3587271 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.88 83.0 8.19e-01 98.0% 99.4%
4944019 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 40.0 5.83e-01 79.3% 96.0%
5041641 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.83 41.0 5.85e-01 80.0% 97.3%
3590570 101.1.2.368 alpha arrays › HTH › HTH › winged helix domain › HTH_36 0.83 48.0 5.22e-01 88.0% 68.8%
4556736 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.82 40.0 5.75e-01 75.3% 100.0%
4930183 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.82 39.0 5.38e-01 79.3% 87.5%
5040795 101.1.2.673 alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.82 38.0 5.40e-01 73.3% 90.7%
5053694 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.80 38.0 5.47e-01 81.3% 97.1%
4945995 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 39.0 5.10e-01 76.0% 82.4%
4937866 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 37.0 4.97e-01 78.7% 81.2%
5038268 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 39.0 5.23e-01 80.0% 85.9%
4984016 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.79 40.0 5.62e-01 82.7% 100.0%
4947296 101.1.2.905 alpha arrays › HTH › HTH › winged helix domain › DUF4443 0.79 35.0 4.87e-01 80.0% 84.0%
4993297 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.79 39.0 5.03e-01 79.3% 81.1%
4945402 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 34.0 3.95e-01 74.7% 54.8%
5040967 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 40.0 5.20e-01 74.0% 84.4%
5034713 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 41.0 4.98e-01 74.7% 78.0%
3964741 101.1.2.368 alpha arrays › HTH › HTH › winged helix domain › HTH_36 0.77 46.0 5.62e-01 86.7% 90.0%
4972222 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 45.0 5.46e-01 88.0% 88.0%
5042832 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.76 39.0 5.01e-01 82.0% 83.3%
4929718 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 38.0 4.51e-01 74.0% 68.6%
5076263 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 38.0 4.95e-01 71.3% 84.7%
3955994 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.76 41.0 5.37e-01 70.0% 94.1%
5039516 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 36.0 4.75e-01 79.3% 81.2%
5000330 101.1.2.109 alpha arrays › HTH › HTH › winged helix domain › Rio2_N 0.75 37.0 4.97e-01 71.3% 88.7%
5034810 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.75 42.0 5.08e-01 74.7% 83.0%
4993353 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.75 41.0 4.97e-01 82.7% 81.0%
4546696 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.74 41.0 5.22e-01 76.0% 91.1%
3255511 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.74 50.0 4.63e-01 94.0% 54.7%
4029392 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.74 50.0 4.68e-01 94.0% 56.2%
5065605 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.73 45.0 5.14e-01 92.0% 82.7%
4974545 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 39.0 4.47e-01 72.0% 70.0%
4956336 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.73 44.0 5.31e-01 91.3% 90.0%
4185879 101.1.2.210 alpha arrays › HTH › HTH › winged helix domain › CggR_N 0.72 36.0 4.78e-01 77.3% 85.9%
4996260 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.72 46.0 4.54e-01 88.0% 60.6%
4191645 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.72 38.0 4.39e-01 76.7% 69.1%
4971290 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.72 43.0 4.81e-01 88.0% 75.0%
4945667 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 45.0 5.08e-01 92.0% 82.6%
4968065 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 46.0 4.62e-01 93.3% 63.2%
5078368 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 39.0 5.02e-01 76.7% 94.1%
3021971 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 35.0 4.59e-01 71.3% 84.5%
5054801 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.71 35.0 4.44e-01 70.7% 78.9%
4965203 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.71 45.0 5.23e-01 87.3% 88.9%
3741614 101.1.2.236 alpha arrays › HTH › HTH › winged helix domain › POLR3C_WHD 0.71 47.0 4.55e-01 92.0% 60.6%
3941961 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 46.0 5.62e-01 86.0% 100.0%
None 0.70 39.0 4.85e-01 82.7% 88.9%
4033238 101.1.2.804 alpha arrays › HTH › HTH › winged helix domain › PF27113 0.70 46.0 4.43e-01 94.7% 57.1%
4967777 101.1.2.222 alpha arrays › HTH › HTH › winged helix domain › PH0730-like_N 0.70 36.0 4.73e-01 71.3% 88.2%
None 0.70 39.0 4.77e-01 82.7% 85.3%
3278899 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 40.0 4.72e-01 88.0% 81.0%
5062735 101.1.2.32 alpha arrays › HTH › HTH › winged helix domain › Rrf2 0.68 40.0 4.07e-01 81.3% 58.6%
5010519 101.1.2.210 alpha arrays › HTH › HTH › winged helix domain › CggR_N 0.68 39.0 4.88e-01 82.7% 89.5%
4982913 101.1.2.222 alpha arrays › HTH › HTH › winged helix domain › PH0730-like_N 0.68 39.0 4.53e-01 82.7% 77.3%
136969 101.1.2.32 alpha arrays › HTH › HTH › winged helix domain › Rrf2 0.68 39.0 3.91e-01 76.7% 55.0%
4957831 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.68 44.0 4.25e-01 90.0% 58.2%
5036922 101.1.2.652 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.67 34.0 3.70e-01 72.0% 55.4%
5013384 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.67 44.0 4.46e-01 94.0% 66.0%
4362777 101.1.2.5 alpha arrays › HTH › HTH › winged helix domain › Crp 0.66 37.0 4.55e-01 84.0% 85.7%
4977284 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.64 41.0 4.26e-01 76.7% 68.6%
4945513 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.58 43.0 3.81e-01 76.0% 84.9%
4956852 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 35.0 4.33e-01 82.7% 98.9%
5070332 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.52 46.0 4.38e-01 95.3% 79.9%
5079223 183.1.1.1 alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Fe_dep_repr_C 0.52 37.0 3.80e-01 74.7% 75.9%
D4 high residues 510-603
PDB
Domain cluster: representative
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3dplC03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 56.0 5.95e-01 97.9% 83.1%
2do7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 57.0 6.10e-01 98.9% 87.5%
3o2pE00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 58.0 6.07e-01 100.0% 84.9%
7dg2C01 1.10.10.1200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH1 motif 0.76 57.0 6.24e-01 98.9% 97.3%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 49.0 5.08e-01 95.7% 70.8%
3cuqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 59.0 6.32e-01 100.0% 98.8%
1fnnB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 55.0 5.39e-01 95.7% 72.8%
1vtnC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 56.0 5.51e-01 96.8% 75.5%
2qbyA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 56.0 5.70e-01 97.9% 84.4%
2qbyB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 54.0 5.50e-01 93.6% 80.2%
4etsA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 49.0 5.11e-01 100.0% 78.2%
1d3yA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 50.0 5.55e-01 96.8% 98.6%
2k85A00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.69 44.0 5.17e-01 70.2% 93.8%
5hvqC01 3.90.1150.220 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.67 51.0 5.43e-01 100.0% 96.2%
3zcoA00 1.10.10.2450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.66 58.0 5.24e-01 95.7% 78.7%
4f0zB00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.64 41.0 3.44e-01 87.2% 38.7%
2klqA00 1.20.58.870 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.63 56.0 5.26e-01 100.0% 88.6%
1cf7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 48.0 5.08e-01 96.8% 95.1%
2fozA00 1.10.4080.10 Mainly Alpha › Orthogonal Bundle › ADP-ribosylglycohydrolase fold › ADP-ribosylation/Crystallin J1 0.60 47.0 3.20e-01 90.4% 23.0%
2olnA02 3.30.9.10 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 0.59 36.0 3.06e-01 83.0% 34.3%
2go7A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.58 36.0 4.07e-01 70.2% 85.1%
1pj5A02 3.30.9.10 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 0.57 35.0 2.83e-01 78.7% 31.5%
2m3aA00 1.10.10.1900 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Knl-2 Myb-like DNA-binding domain-like 0.57 38.0 4.43e-01 98.9% 97.0%
4paaA02 3.30.9.10 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 0.55 34.0 2.85e-01 78.7% 34.1%
3sqiA01 1.10.150.540 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.53 38.0 3.81e-01 94.7% 72.7%
6cy5A01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.53 36.0 3.74e-01 100.0% 75.3%
4zqeA03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.52 34.0 3.42e-01 73.4% 64.6%
6vudA01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.52 41.0 3.96e-01 86.2% 98.2%
1ywqA00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.52 42.0 3.45e-01 94.7% 67.3%
3d8pB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 42.0 3.60e-01 93.6% 98.1%
5wp3B00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.51 40.0 3.89e-01 85.1% 97.1%
1j5wA02 1.20.58.180 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 0.50 37.0 4.05e-01 85.1% 96.1%
ECOD (84)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5030366 101.1.2.181 alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.83 59.0 6.41e-01 100.0% 86.3%
3590074 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 76.0 6.84e-01 100.0% 73.6%
5025361 101.1.2.181 alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.82 57.0 6.23e-01 100.0% 87.2%
3785070 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.81 59.0 5.74e-01 100.0% 69.2%
4972832 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 57.0 6.55e-01 98.9% 98.6%
3479827 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 59.0 6.10e-01 100.0% 81.8%
3994510 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 63.0 5.45e-01 100.0% 55.7%
4932388 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.80 50.0 5.58e-01 70.2% 80.0%
3701463 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.80 59.0 6.16e-01 100.0% 84.7%
3598997 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.80 59.0 6.15e-01 100.0% 84.7%
4109840 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.80 63.0 6.23e-01 95.7% 79.0%
5061575 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 60.0 5.92e-01 97.9% 75.0%
5031401 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 55.0 5.96e-01 98.9% 85.0%
3713829 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.79 58.0 5.66e-01 100.0% 69.9%
3705220 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.79 58.0 6.10e-01 100.0% 84.7%
3386761 101.1.2.137 alpha arrays › HTH › HTH › winged helix domain › OST-HTH 0.79 60.0 6.70e-01 96.8% 100.0%
3176995 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.79 59.0 6.25e-01 100.0% 88.1%
3576823 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.79 59.0 5.27e-01 100.0% 57.4%
4972208 101.1.2.57 alpha arrays › HTH › HTH › winged helix domain › EAP30 0.78 63.0 6.43e-01 100.0% 88.9%
5045249 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 61.0 6.34e-01 100.0% 90.6%
4321924 101.1.2.178 alpha arrays › HTH › HTH › winged helix domain › HTH_61 0.78 60.0 6.07e-01 97.9% 81.1%
3598367 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 59.0 5.97e-01 100.0% 80.6%
3597985 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 57.0 6.13e-01 100.0% 90.0%
4933807 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 60.0 6.33e-01 97.9% 91.8%
3945466 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 54.0 5.30e-01 93.6% 68.0%
3612970 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.77 58.0 5.79e-01 100.0% 76.5%
3372267 101.1.2.178 alpha arrays › HTH › HTH › winged helix domain › HTH_61 0.77 55.0 6.11e-01 97.9% 94.7%
4976651 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 54.0 6.09e-01 93.6% 98.6%
4403239 101.35.1.4 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 0.76 46.0 5.62e-01 100.0% 96.7%
3216952 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 60.0 6.27e-01 100.0% 92.9%
4990676 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.75 62.0 5.86e-01 95.7% 75.5%
4018469 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 57.0 5.55e-01 97.9% 72.4%
3656555 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 58.0 5.41e-01 98.9% 65.8%
5077087 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 51.0 5.08e-01 100.0% 69.5%
4993593 198.1.1.27 alpha arrays › Saposin-like › Saposin-like › Saposin-like › PF27234 0.74 47.0 5.02e-01 70.2% 75.0%
4946714 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.74 57.0 5.88e-01 100.0% 86.7%
4933997 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.74 58.0 5.36e-01 95.7% 65.8%
3948523 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 52.0 5.81e-01 92.6% 98.6%
3758241 198.1.1.1 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2 0.74 46.0 4.71e-01 70.2% 65.6%
3546454 101.1.2.24 alpha arrays › HTH › HTH › winged helix domain › MAGE 0.73 55.0 5.57e-01 100.0% 78.9%
3227729 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.73 57.0 5.54e-01 95.7% 74.3%
3566131 101.1.2.24 alpha arrays › HTH › HTH › winged helix domain › MAGE 0.73 55.0 4.05e-01 100.0% 31.2%
3518589 101.1.2.591 alpha arrays › HTH › HTH › winged helix domain › ssDNA_TraI_N 0.73 55.0 3.88e-01 100.0% 26.2%
3542119 101.1.2.24 alpha arrays › HTH › HTH › winged helix domain › MAGE 0.72 56.0 5.32e-01 100.0% 70.0%
3554511 101.1.2.206 alpha arrays › HTH › HTH › winged helix domain › SAMD1_WH 0.72 53.0 5.73e-01 95.7% 91.3%
4392375 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.72 57.0 5.47e-01 95.7% 73.6%
4996559 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 54.0 5.88e-01 95.7% 100.0%
4945942 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 57.0 5.39e-01 95.7% 72.7%
3716703 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.71 52.0 5.66e-01 98.9% 97.3%
3163573 101.1.2.52 alpha arrays › HTH › HTH › winged helix domain › KicB 0.71 57.0 5.33e-01 97.9% 70.4%
3701996 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 53.0 5.83e-01 97.9% 100.0%
None 0.71 55.0 5.45e-01 95.7% 78.0%
3539518 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 54.0 5.34e-01 100.0% 76.0%
3980670 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 55.0 3.30e-01 100.0% 12.0%
3848260 101.1.2.24 alpha arrays › HTH › HTH › winged helix domain › MAGE 0.70 54.0 4.03e-01 94.7% 32.5%
4971999 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 61.0 5.53e-01 100.0% 71.2%
3726085 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.70 48.0 5.04e-01 94.7% 78.8%
3875839 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.70 56.0 5.21e-01 97.9% 69.6%
3744213 101.1.2.57 alpha arrays › HTH › HTH › winged helix domain › EAP30 0.70 56.0 4.89e-01 100.0% 57.9%
5077356 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 60.0 5.43e-01 100.0% 70.4%
4928210 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 50.0 5.04e-01 100.0% 74.7%
5050129 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.70 59.0 5.58e-01 97.9% 78.2%
3625612 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.70 55.0 5.41e-01 95.7% 79.0%
3648804 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 60.0 5.61e-01 95.7% 75.7%
5065308 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 57.0 5.28e-01 95.7% 70.0%
3497764 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.69 51.0 5.29e-01 98.9% 84.3%
5048461 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 54.0 5.67e-01 100.0% 91.8%
3413597 101.1.2.394 alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.69 60.0 4.02e-01 100.0% 25.8%
4543264 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 54.0 4.55e-01 95.7% 49.1%
3396990 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 54.0 5.76e-01 95.7% 98.8%
4966069 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 52.0 5.38e-01 100.0% 85.6%
3332888 101.1.2.86 alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 0.68 51.0 5.57e-01 93.6% 100.0%
4025377 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 56.0 5.87e-01 97.9% 97.6%
3927517 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.67 54.0 5.30e-01 95.7% 80.0%
3805546 101.1.2.24 alpha arrays › HTH › HTH › winged helix domain › MAGE 0.67 53.0 4.99e-01 97.9% 70.4%
3935995 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.66 45.0 4.84e-01 73.4% 88.0%
3597308 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 59.0 5.09e-01 100.0% 66.2%
3168706 101.1.2.24 alpha arrays › HTH › HTH › winged helix domain › MAGE 0.63 56.0 5.28e-01 100.0% 93.9%
3664080 101.1.2.86 alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 0.63 49.0 4.67e-01 100.0% 72.7%
3262459 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 56.0 5.40e-01 97.9% 90.5%
4959918 284.1.2.0 a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases 0.59 36.0 3.53e-01 100.0% 55.0%
3596230 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 46.0 4.63e-01 95.7% 83.2%
3550061 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.57 49.0 4.81e-01 100.0% 89.5%
4950187 304.103.1.10 a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like › DUF2148 0.52 36.0 2.97e-01 72.3% 88.0%