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MF176161.1__ARW58258.1__DeepPurple_gp007__00008

Bact-Vir

MF176161.1__ARW58258.1__DeepPurple_gp007__00008

Identity

Accession:
MF176161 ↗
Kingdom:
phage

Quality

86.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Deurplevirus› Bacillus_phage_Deep-Purple

TaxID: 1873341

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-37
PDB
Domain cluster: representative
D2 medium residues 41-87
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2lnzA00 1.10.286.70 Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › Get5 dimerization domain 0.74 50.0 5.30e-01 76.6% 85.0%
2yviA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.65 51.0 4.31e-01 93.6% 60.7%
7vkkB01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 41.0 2.73e-01 83.0% 49.4%
2hkeA02 3.30.70.890 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain 0.56 48.0 3.22e-01 100.0% 39.3%
2c42A01 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.53 42.0 2.78e-01 100.0% 72.8%
1s5jA05 1.10.287.1390 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.53 36.0 3.39e-01 74.5% 54.8%
2m3aA00 1.10.10.1900 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Knl-2 Myb-like DNA-binding domain-like 0.52 35.0 3.29e-01 72.3% 59.7%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4946062 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.76 61.0 6.05e-01 91.5% 88.0%
5011906 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.71 59.0 5.68e-01 97.9% 80.0%
5079348 7577.1.1.10 ↗ a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › GDC-P 0.67 45.0 2.91e-01 78.7% 13.9%
4019354 2006.1.6.5 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Tfb4 0.66 53.0 3.38e-01 93.6% 22.0%
3969386 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.65 50.0 4.50e-01 87.2% 81.2%
5033202 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.63 54.0 4.46e-01 100.0% 52.2%
184733 3640.1.1.1 ↗ alpha duplicates or obligate multimers › Minor ampullate fibroin 1 C-terminal domain › Minor ampullate fibroin 1 C-terminal domain › Minor ampullate fibroin 1 C-terminal domain › Spidroin_MaSp 0.63 47.0 3.41e-01 83.0% 27.9%
3220585 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.61 38.0 3.68e-01 72.3% 54.5%
4545598 2484.1.1.48 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.61 48.0 3.37e-01 89.4% 68.8%
3781229 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.61 44.0 3.27e-01 80.9% 34.3%
1906415 3106.1.1.0 ↗ 0.60 41.0 3.96e-01 72.3% 61.1%
3437535 206.1.1.20 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.60 50.0 3.01e-01 95.7% 40.6%
3652169 304.112.1.0 ↗ a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain 0.60 45.0 3.47e-01 80.9% 79.0%
3837059 206.1.1.74 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr 0.58 48.0 2.97e-01 97.9% 25.8%
2774320 189.1.1.1 ↗ alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › RasGAP 0.54 42.0 2.69e-01 100.0% 48.0%
3310138 109.4.1.1409 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_LIN_C, ARM_LIN_2nd 0.51 45.0 2.51e-01 97.9% 8.4%