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MF327009.1__AUV63460.1__Sf25_gp180__00180
Bact-VirMF327009.1__AUV63460.1__Sf25_gp180__00180
Identity
- Accession:
- MF327009 ↗
- Kingdom:
- phage
Quality
81.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Tequatrovirus›
Shigella_phage_Sf25
TaxID: 2024310
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 39-101
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16790.11 best | Phage_clamp_A | 106.2 | 2.80e-30 | 100.0% | 48.6% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3u60A02 | 1.20.272.50 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › Bacteriophage clamp loader A subunit, A' domain | 0.97 | 93.0 | 8.49e-01 | 100.0% | 80.8% |
| 4chdA00 | 3.30.70.3510 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 46.0 | 3.68e-01 | 84.1% | 79.3% |
| 1xx7A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.59 | 41.0 | 3.05e-01 | 74.6% | 68.0% |
| 1j8yF01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.58 | 45.0 | 4.15e-01 | 88.9% | 88.4% |
| 1vk0A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 40.0 | 3.01e-01 | 95.2% | 68.5% |
| 3iuoA00 | 1.10.10.1390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ | 0.51 | 41.0 | 3.58e-01 | 96.8% | 78.9% |
| 3lsjA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 42.0 | 3.32e-01 | 100.0% | 83.0% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4872354 | 101.1.18.1 ↗ | alpha arrays › HTH › HTH › HTH domain in DNA polymerase accessory protein 62 › Phage_clamp_A | 0.97 | 93.0 | 7.40e-01 | 100.0% | 56.8% |
| 1019404 | 138.1.1.7 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › Phage_clamp_A | 0.97 | 92.0 | 7.35e-01 | 100.0% | 56.8% |
| 3598778 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.55 | 40.0 | 3.89e-01 | 79.4% | 75.7% |
| 3705215 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.54 | 38.0 | 3.83e-01 | 77.8% | 80.0% |