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MF356679.1__ASR76328.1__D6_21__00021
Bact-VirMF356679.1__ASR76328.1__D6_21__00021
Identity
- Accession:
- MF356679 ↗
- Kingdom:
- phage
Quality
83.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-166
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1nrkA03 | 2.40.30.160 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.66 | 31.0 | 3.57e-01 | 98.8% | 58.2% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 26.0 | 4.00e-01 | 99.4% | 95.5% |
| 2jheA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.61 | 28.0 | 3.84e-01 | 98.8% | 85.2% |
| 1o6eA00 | 3.20.16.10 | Alpha Beta › Alpha-Beta Barrel › Serine Protease, Human Cytomegalovirus Protease; Chain A › Herpesvirus/Caudovirus protease domain | 0.59 | 55.0 | 4.88e-01 | 100.0% | 97.3% |
| 3p96A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.59 | 29.0 | 3.94e-01 | 99.4% | 90.5% |
| 6lxgA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.59 | 28.0 | 3.94e-01 | 99.4% | 97.3% |
| 2l48A00 | 3.30.70.2030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 26.0 | 3.39e-01 | 99.4% | 74.1% |
| 2ewhA01 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.58 | 27.0 | 3.64e-01 | 99.4% | 82.4% |
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.58 | 27.0 | 3.63e-01 | 90.7% | 86.1% |
| 1vq8S00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 25.0 | 3.33e-01 | 77.6% | 75.3% |
| 5mmiU01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.56 | 25.0 | 3.35e-01 | 100.0% | 78.0% |
| 2v9kA04 | 3.30.70.3190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 36.0 | 4.24e-01 | 99.4% | 94.5% |
| 3dpuB03 | 3.30.310.200 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.55 | 34.0 | 4.09e-01 | 99.4% | 92.6% |
| 1ywuA00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.54 | 30.0 | 3.41e-01 | 100.0% | 68.8% |
| 2anrA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.54 | 27.0 | 3.64e-01 | 86.3% | 98.7% |
| 3nlcA01 | 3.30.70.2700 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 27.0 | 3.56e-01 | 97.5% | 94.7% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.53 | 28.0 | 3.20e-01 | 77.0% | 65.6% |
| 2yvsA02 | 3.30.70.2560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 22.0 | 3.14e-01 | 99.4% | 91.5% |
| 2xxlA03 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 33.0 | 3.61e-01 | 99.4% | 76.2% |
| 5bmnA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.52 | 28.0 | 3.69e-01 | 96.9% | 97.6% |
| 2ednA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 29.0 | 3.25e-01 | 93.8% | 69.5% |
| 2e7vA01 | 3.30.70.960 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SEA domain | 0.52 | 32.0 | 3.78e-01 | 98.1% | 91.4% |
| 1xauA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 28.0 | 3.35e-01 | 97.5% | 77.9% |
| 2ehbD00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.51 | 30.0 | 3.37e-01 | 98.8% | 73.8% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3585229 | 50.1.1.2 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S77 | 0.81 | 68.0 | 7.27e-01 | 100.0% | 99.3% |
| 4995675 | 50.1.1.0 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin | 0.81 | 67.0 | 6.71e-01 | 95.7% | 83.6% |
| 3964948 | 1.1.16.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › Peptidase_S78 | 0.79 | 58.0 | 6.57e-01 | 99.4% | 96.8% |
| 5083161 | 50.1.1.3 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S78 | 0.77 | 58.0 | 6.16e-01 | 93.8% | 86.2% |
| 3964748 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.77 | 44.0 | 5.41e-01 | 90.1% | 86.7% |
| 5003309 | 50.1.1.0 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin | 0.76 | 59.0 | 6.48e-01 | 99.4% | 99.2% |
| 3954964 | 50.1.1.3 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S78 | 0.74 | 60.0 | 6.36e-01 | 99.4% | 94.5% |
| 4215822 | 1.1.8.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › YgfZ_barrel | 0.70 | 32.0 | 4.62e-01 | 97.5% | 97.1% |
| 4331397 | 1.1.8.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › YgfZ_barrel | 0.69 | 34.0 | 4.65e-01 | 91.3% | 92.5% |
| 3602442 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.68 | 45.0 | 5.37e-01 | 93.8% | 98.2% |
| 4072484 | 1.1.8.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › YgfZ_barrel | 0.67 | 32.0 | 4.19e-01 | 99.4% | 81.1% |
| 4032431 | 50.1.1.3 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S78 | 0.67 | 53.0 | 5.44e-01 | 95.7% | 86.5% |
| 5038126 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.66 | 29.0 | 4.01e-01 | 99.4% | 84.0% |
| 1150480 | 50.1.1.1 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S21 | 0.59 | 37.0 | 4.54e-01 | 80.7% | 97.1% |
| 3256764 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.59 | 34.0 | 3.76e-01 | 90.7% | 69.2% |
| 4006107 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.58 | 27.0 | 3.77e-01 | 99.4% | 92.0% |
| 3942221 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.58 | 27.0 | 3.77e-01 | 99.4% | 92.0% |
| 3501754 | 1.1.13.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Caud_tail_N | 0.58 | 24.0 | 2.90e-01 | 71.4% | 57.1% |
| 2568840 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.58 | 36.0 | 4.25e-01 | 96.9% | 90.1% |
| 4937870 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.57 | 29.0 | 3.67e-01 | 100.0% | 81.1% |
| 3388732 | 331.1.1.5 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N | 0.57 | 30.0 | 3.94e-01 | 81.4% | 94.1% |
| 3526482 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.56 | 32.0 | 3.76e-01 | 96.9% | 81.9% |
| 4343880 | 304.28.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Sec_GG | 0.55 | 28.0 | 3.75e-01 | 99.4% | 91.8% |
| 3266782 | 11.1.1.912 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28397 | 0.55 | 34.0 | 3.39e-01 | 94.4% | 56.6% |
| 4935680 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.53 | 28.0 | 3.31e-01 | 100.0% | 72.7% |
| 4952886 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.51 | 30.0 | 3.45e-01 | 100.0% | 80.0% |
| 5064269 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.50 | 28.0 | 3.60e-01 | 86.3% | 100.0% |
D2
medium
residues 167-232
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6r1nA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.80 | 63.0 | 5.41e-01 | 84.8% | 58.3% |
| 1a52A00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.79 | 71.0 | 4.79e-01 | 100.0% | 91.6% |
| 2ddmB00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.75 | 52.0 | 3.38e-01 | 71.2% | 86.7% |
| 2oauA01 | 1.10.287.1260 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.72 | 50.0 | 4.34e-01 | 72.7% | 48.0% |
| 3vpxB02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.68 | 46.0 | 3.30e-01 | 71.2% | 34.7% |
| 2x9qB00 | 3.40.50.11710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase | 0.66 | 49.0 | 3.34e-01 | 78.8% | 33.8% |
| 3cjlA00 | 3.10.20.850 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Protein of unknown function DUF3861 | 0.63 | 43.0 | 3.92e-01 | 71.2% | 78.4% |
| 5ywwA01 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.62 | 36.0 | 2.99e-01 | 77.3% | 33.0% |
| 5k3hB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.58 | 47.0 | 3.66e-01 | 84.8% | 43.6% |
| 5d8cA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.58 | 48.0 | 4.03e-01 | 98.5% | 85.7% |
| 4yzgA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.53 | 41.0 | 2.81e-01 | 89.4% | 52.7% |
| 1dofA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.52 | 38.0 | 4.13e-01 | 86.4% | 94.6% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5060609 | 632.8.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 | 0.81 | 56.0 | 5.39e-01 | 72.7% | 65.3% |
| 4068539 | 602.1.1.1 ↗ | alpha arrays › L-aspartase middle domain-like › L-aspartase middle domain-like › L-aspartase middle domain-like › Lyase_1 | 0.70 | 57.0 | 3.62e-01 | 89.4% | 72.8% |
| 4081378 | 5067.1.1.2 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › SecD_SecF | 0.66 | 58.0 | 4.04e-01 | 98.5% | 97.3% |
| 4864573 | 11.1.1.45 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Sec63 | 0.61 | 39.0 | 3.27e-01 | 81.8% | 37.1% |
| 5067264 | 101.1.2.21 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress | 0.60 | 47.0 | 3.83e-01 | 83.3% | 70.0% |
D3
medium
residues 233-298
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1w99A01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.80 | 58.0 | 4.19e-01 | 75.8% | 30.1% |
| 2qywA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.78 | 56.0 | 4.87e-01 | 74.2% | 53.7% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.76 | 52.0 | 4.69e-01 | 71.2% | 77.8% |
| 2ficB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.74 | 63.0 | 4.51e-01 | 98.5% | 91.5% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 52.0 | 4.54e-01 | 74.2% | 76.0% |
| 1ij5A01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 48.0 | 4.60e-01 | 72.7% | 59.2% |
| 3nyjA00 | 1.20.120.770 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Amyloid precursor protein, E2 domain | 0.72 | 55.0 | 3.95e-01 | 80.3% | 52.5% |
| 2fgyA01 | 1.20.120.1310 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Carboxysome Shell Carbonic Anhydrase, N-terminal helical domain | 0.71 | 51.0 | 4.32e-01 | 75.8% | 77.6% |
| 4e6nA02 | 6.10.140.1010 | Special › Helix non-globular › Helix Hairpins › | 0.70 | 48.0 | 4.86e-01 | 71.2% | 78.8% |
| 2rbdA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.68 | 59.0 | 4.58e-01 | 98.5% | 96.7% |
| 2qgsB01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.67 | 49.0 | 4.43e-01 | 77.3% | 73.9% |
| 2qksA01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.67 | 56.0 | 4.75e-01 | 90.9% | 60.4% |
| 3b0bB00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.66 | 48.0 | 4.29e-01 | 78.8% | 57.7% |
| 1jfiB00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.66 | 50.0 | 3.93e-01 | 80.3% | 41.5% |
| 1r4sA00 | 3.10.270.10 | Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; | 0.65 | 45.0 | 2.97e-01 | 74.2% | 34.7% |
| 1vsgA02 | 1.10.470.10 | Mainly Alpha › Orthogonal Bundle › Variant Surface Glycoprotein, subunit A; domain 2 › Variant Surface Glycoprotein, subunit A, domain 2 | 0.64 | 48.0 | 3.63e-01 | 80.3% | 62.9% |
| 3tp3A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.62 | 52.0 | 4.07e-01 | 93.9% | 99.3% |
| 1vluA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.62 | 44.0 | 3.00e-01 | 75.8% | 68.5% |
| 4f7nB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.62 | 43.0 | 3.48e-01 | 74.2% | 48.5% |
| 4pdyA02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.58 | 49.0 | 3.29e-01 | 90.9% | 75.5% |
| 2vycA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 40.0 | 3.16e-01 | 80.3% | 52.5% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4547274 | 3714.1.1.0 ↗ | a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain | 0.86 | 62.0 | 5.30e-01 | 75.8% | 52.0% |
| 3628013 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.82 | 61.0 | 4.11e-01 | 77.3% | 25.5% |
| 3756047 | 192.29.1.243 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Fy-3 | 0.82 | 59.0 | 5.26e-01 | 75.8% | 58.9% |
| 1106555 | 3812.1.1.1 ↗ | alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE › T3SS_needle_E | 0.79 | 57.0 | 5.71e-01 | 74.2% | 90.9% |
| 3906696 | 101.1.2.725 ↗ | alpha arrays › HTH › HTH › winged helix domain › TAPR1-like | 0.78 | 56.0 | 4.55e-01 | 81.8% | 41.7% |
| 3719896 | 3755.2.1.0 ↗ | alpha bundles › YscO-like › Flagellar FliJ protein › Flagellar FliJ protein | 0.78 | 56.0 | 4.92e-01 | 75.8% | 53.7% |
| 3967556 | 601.3.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain | 0.77 | 55.0 | 4.70e-01 | 75.8% | 49.0% |
| 4962781 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.77 | 53.0 | 5.04e-01 | 71.2% | 65.3% |
| 3884649 | 192.5.1.1 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 | 0.77 | 55.0 | 4.86e-01 | 75.8% | 54.7% |
| 3580170 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.76 | 69.0 | 5.27e-01 | 100.0% | 73.8% |
| 4025776 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.75 | 55.0 | 4.84e-01 | 77.3% | 56.8% |
| 3926706 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.75 | 54.0 | 4.68e-01 | 75.8% | 51.0% |
| 5021415 | 3579.1.1.33 ↗ | extended segments › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › PsiE | 0.75 | 61.0 | 4.91e-01 | 87.9% | 74.4% |
| 3553833 | 5086.1.1.102 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › PTHB1_hp | 0.75 | 67.0 | 4.79e-01 | 100.0% | 62.1% |
| 5046057 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.75 | 53.0 | 5.33e-01 | 74.2% | 80.0% |
| 3883768 | 5086.1.1.101 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › SH3BP5 | 0.74 | 53.0 | 4.30e-01 | 75.8% | 40.8% |
| 3396986 | 3860.1.1.0 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm | 0.73 | 54.0 | 4.72e-01 | 78.8% | 53.7% |
| 4375453 | 622.4.1.26 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › HisKA | 0.72 | 52.0 | 5.02e-01 | 75.8% | 86.7% |
| 3215342 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.72 | 52.0 | 4.56e-01 | 75.8% | 54.7% |
| 4010395 | 622.4.1.26 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › HisKA | 0.72 | 50.0 | 4.98e-01 | 74.2% | 80.0% |
| 5000270 | 3646.1.1.0 ↗ | alpha complex topology › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters | 0.71 | 50.0 | 3.47e-01 | 74.2% | 25.0% |
| 5030936 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.70 | 56.0 | 3.95e-01 | 100.0% | 28.7% |
| 3759444 | 611.8.1.0 ↗ | alpha bundles › N-cbl like › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 | 0.69 | 61.0 | 4.55e-01 | 97.0% | 70.6% |
| 3758573 | 10.32.1.214 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BRINP | 0.69 | 49.0 | 3.69e-01 | 74.2% | 44.0% |
| 4949876 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.68 | 47.0 | 4.82e-01 | 72.7% | 75.4% |
| 3559290 | 389.1.1.119 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › BRINP | 0.66 | 47.0 | 3.74e-01 | 74.2% | 50.8% |
| 3990854 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.66 | 48.0 | 4.30e-01 | 75.8% | 57.8% |
| 3417343 | 109.4.1.1718 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF26716 | 0.66 | 56.0 | 4.42e-01 | 89.4% | 96.8% |
| 3724512 | 148.1.1.21 ↗ | alpha arrays › Histone-like › Histone-related › Histone › SAGA-Tad1 | 0.63 | 49.0 | 4.09e-01 | 81.8% | 57.9% |
| 3570364 | 509.1.1.1 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH | 0.61 | 47.0 | 4.30e-01 | 84.8% | 68.9% |
| 2770258 | 109.4.1.95 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 | 0.58 | 40.0 | 2.97e-01 | 72.7% | 43.9% |
| 3440579 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.55 | 38.0 | 3.59e-01 | 72.7% | 77.5% |