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MF356679.1__ASR76384.1__D6_23__00023

Bact-Vir

MF356679.1__ASR76384.1__D6_23__00023

Identity

Accession:
MF356679 ↗
Kingdom:
phage

Quality

92.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-109
PDB
Domain cluster: representative
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hx8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 46.0 4.05e-01 70.8% 90.6%
7bwcA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.65 48.0 3.28e-01 77.5% 50.2%
3qc2B00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.65 48.0 3.20e-01 77.5% 46.8%
4ge1C00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.64 56.0 4.39e-01 97.8% 61.7%
3fyfA00 2.40.128.410 Mainly Beta › Beta Barrel › Lipocalin › 0.64 52.0 4.42e-01 89.9% 79.2%
3jv1A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.64 56.0 4.50e-01 100.0% 62.6%
8aa0E01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.63 48.0 3.32e-01 80.9% 48.7%
2wjqA00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.62 51.0 3.84e-01 87.6% 70.7%
1mdcA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 43.0 3.84e-01 84.3% 49.6%
3omlA03 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.61 47.0 3.31e-01 80.9% 84.6%
4ao8A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.61 47.0 3.50e-01 83.1% 51.7%
2l33A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.61 36.0 3.57e-01 86.5% 56.0%
2jjdF02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.61 49.0 3.48e-01 86.5% 31.7%
2bzlA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.60 49.0 3.37e-01 86.5% 32.7%
4ge6A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.60 48.0 3.32e-01 86.5% 30.7%
1a5yA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.60 48.0 3.36e-01 86.5% 31.0%
2shpB03 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.59 48.0 3.32e-01 85.4% 30.9%
1zc0A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.59 48.0 3.33e-01 86.5% 29.0%
1lkeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 52.0 4.33e-01 97.8% 65.0%
1x7dB01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.59 49.0 4.04e-01 92.1% 61.5%
3bgaA05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.59 47.0 3.34e-01 85.4% 95.6%
4qunA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.59 47.0 3.28e-01 85.4% 29.3%
4fwwA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 49.0 3.19e-01 95.5% 45.2%
1yq2A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.59 45.0 3.13e-01 80.9% 87.7%
1wchA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.58 47.0 3.22e-01 86.5% 26.6%
4pn0C00 3.20.100.10 Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › mRNA triphosphatase Cet1-like 0.58 42.0 2.98e-01 74.2% 56.6%
3qcmA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.58 47.0 3.26e-01 86.5% 29.0%
3hdjA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.58 47.0 4.08e-01 89.9% 71.4%
4ikcA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.57 46.0 3.23e-01 85.4% 29.6%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.57 43.0 2.91e-01 80.9% 35.2%
5gv0A00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.57 50.0 4.15e-01 98.9% 87.7%
1yguA02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.57 46.0 3.20e-01 86.5% 30.1%
1y0gA00 2.40.128.110 Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like 0.56 49.0 4.07e-01 100.0% 97.0%
1vkdA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.56 45.0 3.15e-01 91.0% 79.8%
2hboA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 44.0 3.88e-01 86.5% 94.0%
1omoA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.56 46.0 3.97e-01 94.4% 72.5%
2pcsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 47.0 3.92e-01 92.1% 63.8%
4bboA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.54 46.0 4.30e-01 97.8% 97.3%
4n4bA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.53 45.0 3.13e-01 95.5% 93.1%
3auxA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 42.0 2.81e-01 85.4% 37.6%
1lf7A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 47.0 3.81e-01 97.8% 57.9%
4c47A01 2.60.40.1620 Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like 0.52 44.0 3.94e-01 91.0% 86.9%
7pjjA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 41.0 3.76e-01 94.4% 85.4%
2vckA00 3.40.1500.20 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › 0.50 43.0 3.41e-01 100.0% 75.5%
3tqmA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.50 40.0 4.05e-01 93.3% 86.7%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3974774 897.2.1.0 a+b two layers › Acidic mitochondrial matrix protein p32-like › Protein E › Protein E 0.77 71.0 6.18e-01 100.0% 76.9%
3736971 5.1.3.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase 0.71 51.0 3.30e-01 74.2% 44.9%
3850814 5.1.4.12 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.71 60.0 3.77e-01 91.0% 49.5%
3698170 5.1.3.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase 0.71 50.0 3.26e-01 74.2% 48.9%
3603190 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.71 53.0 3.13e-01 78.7% 20.8%
3735233 5.1.3.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase 0.69 49.0 3.24e-01 74.2% 46.1%
3938904 3794.1.1.0 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.69 50.0 4.30e-01 85.4% 49.6%
3991735 9.1.1.49 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7043 0.69 55.0 5.08e-01 87.6% 99.1%
3961612 881.1.1.8 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PknH_C 0.68 52.0 3.96e-01 80.9% 38.2%
3976580 243.1.1.21 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF3828 0.68 50.0 4.16e-01 77.5% 80.4%
3237402 5084.4.1.2 beta barrels › Outer membrane meander beta-barrels › Outer membrane phospholipase A (OMPLA) › Outer membrane phospholipase A (OMPLA) › DUF7042 0.67 54.0 4.62e-01 87.6% 84.1%
3511507 9.1.1.49 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7043 0.67 56.0 5.11e-01 92.1% 73.7%
3703043 5.1.4.597 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BNR_3 0.66 49.0 3.43e-01 78.7% 83.7%
3575937 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 55.0 3.80e-01 91.0% 62.0%
3520852 3794.1.1.0 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.66 49.0 4.09e-01 85.4% 46.7%
3526118 11.1.1.810 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › FGF-BP1 0.65 46.0 4.37e-01 74.2% 99.0%
4952360 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.65 46.0 2.92e-01 74.2% 26.2%
3876703 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.65 48.0 3.13e-01 78.7% 32.1%
4003669 5.1.4.37 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 0.65 47.0 2.98e-01 77.5% 36.9%
3393241 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.64 47.0 3.33e-01 78.7% 40.0%
2644388 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.62 44.0 3.90e-01 74.2% 83.8%
3212053 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.62 49.0 3.37e-01 85.4% 27.2%
4001579 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.62 52.0 4.81e-01 93.3% 98.3%
4959452 7579.1.1.27 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › AXE1 0.62 51.0 3.51e-01 89.9% 42.1%
3904005 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.62 49.0 3.34e-01 84.3% 29.3%
3249471 71.1.1.16 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Ependymin_amoebozoa 0.61 53.0 4.05e-01 96.6% 42.0%
3251181 883.1.1.18 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › PF26545 0.61 53.0 4.18e-01 92.1% 100.0%
3798358 2007.2.3.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II 0.61 49.0 3.31e-01 85.4% 28.7%
4963006 4.1.1.490 beta barrels › SH3 › SH3 › SH3 › PF26269 0.61 47.0 4.80e-01 97.8% 87.1%
3699353 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.60 48.0 3.25e-01 85.4% 25.5%
None 0.60 48.0 3.28e-01 85.4% 27.2%
4965849 3435.1.1.9 a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › DUF4747 0.60 46.0 3.36e-01 96.6% 29.0%
3231376 11.10.1.6 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.60 47.0 4.10e-01 83.1% 63.1%
3238942 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.60 49.0 3.28e-01 86.5% 24.8%
3213551 11.10.1.6 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.59 51.0 4.51e-01 92.1% 69.6%
3540675 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.59 48.0 3.19e-01 85.4% 24.5%
3801135 2007.2.3.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II 0.59 48.0 3.33e-01 86.5% 31.1%
3625276 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.59 48.0 3.32e-01 86.5% 31.0%
3214412 11.10.1.6 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.59 49.0 4.35e-01 91.0% 66.2%
3272884 71.1.1.16 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Ependymin_amoebozoa 0.59 52.0 4.10e-01 100.0% 47.0%
3216472 11.10.1.6 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.59 50.0 4.43e-01 91.0% 68.0%
3225961 11.10.1.6 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.59 49.0 4.35e-01 92.1% 65.4%
3234784 11.10.1.6 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.59 45.0 3.91e-01 83.1% 90.0%
4991720 3692.1.1.0 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain 0.59 46.0 4.16e-01 86.5% 68.8%
3855356 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.58 47.0 3.22e-01 86.5% 26.2%
3217795 11.10.1.6 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.58 49.0 4.45e-01 94.4% 67.2%
3243158 11.10.1.6 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.58 49.0 4.24e-01 91.0% 61.5%
3212038 11.10.1.6 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.58 48.0 4.16e-01 91.0% 63.6%
3655368 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.58 36.0 3.86e-01 87.6% 73.3%
3221414 11.10.1.6 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.58 48.0 3.21e-01 91.0% 23.4%
5036205 2004.1.1.348 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SbcC_Walker_B 0.58 41.0 2.40e-01 74.2% 15.3%
3399941 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.57 51.0 4.62e-01 96.6% 97.5%
3255413 71.1.1.16 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Ependymin_amoebozoa 0.57 52.0 3.97e-01 98.9% 79.0%
3223598 11.10.1.6 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.57 48.0 4.11e-01 91.0% 63.6%
3240153 11.10.1.6 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.57 49.0 4.38e-01 94.4% 68.8%
3386065 9.5.1.0 beta barrels › Lipocalins/Streptavidin › Hypothetical protein TT1927B › Hypothetical protein TT1927B 0.57 48.0 3.98e-01 96.6% 97.1%
4883232 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.57 44.0 3.09e-01 83.1% 98.0%
3214409 11.10.1.6 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.57 49.0 4.33e-01 95.5% 66.2%
3967111 3338.2.1.2 a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB › BamI_lipocalin 0.56 44.0 3.99e-01 91.0% 61.6%
4929398 3604.1.1.0 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain 0.55 45.0 4.70e-01 89.9% 97.5%
3840132 9.5.1.1 beta barrels › Lipocalins/Streptavidin › Hypothetical protein TT1927B › Hypothetical protein TT1927B › YceI 0.55 47.0 3.98e-01 98.9% 99.4%
5025792 3692.1.1.1 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.54 43.0 4.04e-01 89.9% 73.9%
3247634 11.10.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.53 44.0 3.83e-01 91.0% 62.2%
None 0.51 40.0 2.80e-01 85.4% 27.5%
3169357 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.51 40.0 3.75e-01 86.5% 75.5%
5053021 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.50 34.0 3.47e-01 70.8% 80.0%