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MF356679.1__ASR76395.1__D6_75__00075
Bact-VirMF356679.1__ASR76395.1__D6_75__00075
Identity
- Accession:
- MF356679 ↗
- Kingdom:
- phage
Quality
88.6
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 34-101
Domain cluster:
rep: KF147891.1__AGS81953.1__PaBG_00069__00069__D24-99
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4b8vA02 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.66 | 48.0 | 4.72e-01 | 85.3% | 72.6% |
| 4b8vA03 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.65 | 44.0 | 4.88e-01 | 82.4% | 100.0% |
| 2gu1A01 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 53.0 | 4.87e-01 | 98.5% | 89.8% |
| 4r6gA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.60 | 45.0 | 2.74e-01 | 80.9% | 15.5% |
| 5hzlB01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.60 | 44.0 | 3.26e-01 | 79.4% | 40.0% |
| 6spbZ00 | 3.30.1390.20 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L30/L7 | 0.59 | 36.0 | 3.89e-01 | 88.2% | 73.7% |
| 1tkeA03 | 3.30.54.20 | Alpha Beta › 2-Layer Sandwich › Replication Terminator Protein; Chain A, domain 2 › | 0.58 | 37.0 | 4.00e-01 | 88.2% | 77.6% |
| 4iiwA01 | 3.30.1490.480 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Endolytic murein transglycosylase | 0.57 | 43.0 | 4.24e-01 | 92.6% | 75.0% |
| 4fdyA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.54 | 41.0 | 3.21e-01 | 85.3% | 64.0% |
| 1j5yA02 | 3.30.1340.20 | Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › 3H domain | 0.53 | 40.0 | 3.55e-01 | 85.3% | 77.6% |
| 6g62A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 35.0 | 2.95e-01 | 70.6% | 69.6% |
| 2kgjA00 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.51 | 35.0 | 3.15e-01 | 73.5% | 74.5% |
| 4lviA01 | 3.30.930.30 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › | 0.51 | 39.0 | 3.02e-01 | 89.7% | 88.4% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995817 | 101.15.1.4 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_gp53 | 0.84 | 76.0 | 7.60e-01 | 100.0% | 95.7% |
| 5004560 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.78 | 59.0 | 6.46e-01 | 85.3% | 100.0% |
| 3166029 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.75 | 54.0 | 5.87e-01 | 80.9% | 94.5% |
| 3587382 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.75 | 57.0 | 6.14e-01 | 82.4% | 100.0% |
| 2809236 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.74 | 61.0 | 6.38e-01 | 91.2% | 96.8% |
| 3305689 | 101.15.1.9 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_CERK1_LYK3_4_5 | 0.74 | 54.0 | 4.30e-01 | 85.3% | 38.6% |
| 3353525 | 101.15.1.6 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_CERK1_LYK3_4_5 | 0.74 | 53.0 | 4.32e-01 | 85.3% | 41.6% |
| 4177991 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.73 | 55.0 | 5.97e-01 | 83.8% | 100.0% |
| 2968802 | 101.15.1.11 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_NFP | 0.70 | 52.0 | 4.14e-01 | 83.8% | 39.1% |
| 3979943 | 101.15.1.3 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_tail_X | 0.70 | 49.0 | 5.63e-01 | 73.5% | 100.0% |
| None | — | 0.66 | 51.0 | 4.25e-01 | 85.3% | 52.8% | |
| 2895417 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.66 | 49.0 | 4.75e-01 | 80.9% | 72.7% |
| 3970261 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.65 | 46.0 | 5.00e-01 | 80.9% | 98.1% |
| 3964567 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.64 | 52.0 | 5.11e-01 | 94.1% | 94.7% |
| 3422876 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.63 | 48.0 | 5.05e-01 | 91.2% | 95.0% |
| 3611431 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.62 | 46.0 | 4.87e-01 | 82.4% | 93.3% |
| 3716764 | 101.15.1.12 ↗ | alpha arrays › HTH › LysM domain › LysM domain › PF30403 | 0.59 | 44.0 | 4.60e-01 | 82.4% | 93.3% |
| 3386481 | 3953.1.1.0 ↗ | a+b two layers › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3 N-terminal domain | 0.59 | 49.0 | 4.42e-01 | 97.1% | 85.0% |