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MF356679.1__ASR76421.1__D6_59__00059

Bact-Vir

MF356679.1__ASR76421.1__D6_59__00059

Identity

Accession:
MF356679 ↗
Kingdom:
phage

Quality

76.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Escherichia_phage_D6

TaxID: 2014434

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-76
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF10784.16 best Plasmid_stab_B 35.4 1.10e-08 93.2% 56.9%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jd3A01 6.10.290.20 Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.83 74.0 6.76e-01 100.0% 82.1%
1r71A02 6.10.250.140 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.69 41.0 4.18e-01 81.4% 60.3%
2cruA01 1.10.8.140 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PDCD5, DNA-binding domain 0.55 43.0 4.08e-01 93.2% 80.5%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3947907 101.1.11.16 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › Plasmid_stab_B 0.95 89.0 8.06e-01 98.3% 84.0%
4659702 101.1.11.16 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › Plasmid_stab_B 0.91 83.0 7.28e-01 100.0% 75.3%
3943903 101.1.11.16 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › Plasmid_stab_B 0.85 77.0 7.06e-01 100.0% 85.3%
184643 101.1.11.16 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › Plasmid_stab_B 0.83 74.0 6.43e-01 100.0% 71.1%
3731591 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.58 49.0 4.49e-01 98.3% 85.0%