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MF360958.1__ASV44178.1__PBI_SCTP2_163__00163

Bact-Vir

MF360958.1__ASV44178.1__PBI_SCTP2_163__00163

Identity

Accession:
MF360958 ↗
Kingdom:
phage

Quality

72.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Salicola_phage_SCTP-2

TaxID: 2015814

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 98-186
PDB
Domain cluster: rep: OV032902.1__CAH0447963.1__SM033_00139__00139__D168-264
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qexA02 2.60.120.640 Mainly Beta › Sandwich › Jelly Rolls › gp9 0.79 74.0 7.03e-01 100.0% 92.2%
6o38A04 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.76 66.0 6.62e-01 100.0% 92.1%
6o38A01 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.72 66.0 6.52e-01 100.0% 96.7%
4dnyA00 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.71 65.0 6.08e-01 100.0% 84.4%
6o38A03 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.71 60.0 6.16e-01 95.5% 97.6%
5tk2B00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.65 44.0 4.50e-01 84.3% 71.6%
1sppB00 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.64 53.0 4.95e-01 91.0% 92.0%
1hf2A02 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.64 50.0 4.78e-01 100.0% 72.6%
4lorA03 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.63 50.0 4.57e-01 86.5% 91.6%
3dtnA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 46.0 3.66e-01 78.7% 76.5%
2qqkA02 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.62 49.0 4.57e-01 86.5% 86.1%
5lwxA03 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.62 46.0 3.56e-01 79.8% 73.8%
1a3zA00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.62 52.0 4.50e-01 95.5% 88.0%
1sddB02 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.62 48.0 4.35e-01 84.3% 76.8%
4v02C00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.62 51.0 4.59e-01 100.0% 65.6%
2uxtA02 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.62 48.0 3.99e-01 84.3% 85.1%
5lwxA01 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.61 46.0 3.92e-01 79.8% 77.9%
6voxA02 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.61 48.0 4.45e-01 84.3% 85.7%
1kbvA02 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.61 47.0 3.99e-01 84.3% 74.7%
4f7kA03 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.60 47.0 4.36e-01 85.4% 67.5%
2ux6A00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.59 44.0 4.00e-01 79.8% 70.5%
1id2A00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.59 43.0 4.11e-01 85.4% 65.1%
3ihtA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 44.0 3.60e-01 78.7% 81.6%
5fc9A00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.59 43.0 4.27e-01 78.7% 94.7%
2i6gB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 45.0 3.54e-01 83.1% 83.4%
7wguB01 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.58 41.0 4.10e-01 83.1% 71.4%
3v9eA03 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.58 46.0 3.60e-01 85.4% 64.8%
6hbeA01 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.58 47.0 4.17e-01 89.9% 91.7%
3ou2A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 44.0 3.47e-01 83.1% 77.5%
3bgvD00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 43.0 3.15e-01 82.0% 89.6%
4dxzA00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.57 44.0 4.14e-01 85.4% 90.1%
2vdwG00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 43.0 3.10e-01 82.0% 84.8%
3bkwB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 43.0 3.29e-01 82.0% 90.3%
1bxvA00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.56 42.0 4.18e-01 79.8% 94.5%
2y0oA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 45.0 3.75e-01 91.0% 70.8%
3zx1A01 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.55 48.0 4.06e-01 100.0% 78.8%
4bxsV03 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.55 47.0 3.21e-01 96.6% 67.8%
3h2bB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 41.0 3.30e-01 83.1% 78.1%
1sddA02 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.55 40.0 3.86e-01 77.5% 79.2%
3ztdF01 2.60.40.780 Mainly Beta › Sandwich › Immunoglobulin-like › von Hippel-Lindau disease tumour suppressor, beta domain 0.54 38.0 3.83e-01 96.6% 72.2%
2vveA01 2.60.120.770 Mainly Beta › Sandwich › Jelly Rolls › 0.54 41.0 4.14e-01 92.1% 79.6%
7wqxA01 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.53 46.0 4.38e-01 97.8% 92.5%
2wpgA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 40.0 4.31e-01 93.3% 96.0%
4f2eA00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.53 46.0 4.52e-01 100.0% 95.9%
3e38A02 2.60.40.3090 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 39.0 4.08e-01 95.5% 89.9%
2rbcA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.50 38.0 2.73e-01 83.1% 34.6%
3zo9B03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.50 41.0 4.08e-01 94.4% 93.7%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2581340 520.2.1.1 ↗ beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich 0.76 66.0 6.71e-01 100.0% 95.4%
2581337 520.2.1.1 ↗ beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich 0.72 66.0 6.49e-01 100.0% 95.7%
2581339 520.2.1.1 ↗ beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich 0.72 64.0 6.32e-01 100.0% 92.6%
4475590 207.5.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C 0.64 52.0 4.96e-01 100.0% 75.2%
1243672 3156.1.1.13 ↗ beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cupredoxin_1 0.64 44.0 4.33e-01 84.3% 65.6%
2721653 3156.1.1.9 ↗ beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase_3 0.63 50.0 4.40e-01 87.6% 88.6%
7233 207.5.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C 0.63 50.0 4.76e-01 100.0% 72.0%
4663567 207.6.1.12 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › Ice_nucleation 0.63 50.0 3.02e-01 100.0% 12.9%
1489336 207.5.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C 0.62 51.0 4.64e-01 100.0% 67.8%
3749560 3156.1.1.0 ↗ beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related 0.62 49.0 3.15e-01 85.4% 50.4%
4459287 207.5.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C 0.61 50.0 4.78e-01 100.0% 76.2%
4651440 207.5.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C 0.61 50.0 4.72e-01 100.0% 73.6%
3233834 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.61 48.0 4.44e-01 87.6% 86.7%
3874165 3156.1.1.4 ↗ beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase 0.61 48.0 4.02e-01 85.4% 74.2%
3764403 3156.1.1.0 ↗ beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related 0.60 47.0 4.12e-01 84.3% 74.8%
5059872 207.2.1.22 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.59 51.0 3.43e-01 100.0% 39.2%
4602942 3156.1.1.13 ↗ beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cupredoxin_1 0.59 44.0 4.40e-01 79.8% 94.4%
4419821 207.5.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C 0.59 50.0 4.65e-01 100.0% 73.9%
4926867 3156.1.1.3 ↗ beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Copper-bind 0.58 43.0 3.93e-01 80.9% 73.6%
1889974 4081.1.1.6 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › LppM 0.58 42.0 3.51e-01 77.5% 90.1%
4131560 207.5.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C 0.57 50.0 4.60e-01 100.0% 75.0%
1878251 12.1.1.51 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › pulA_all-beta 0.56 43.0 4.43e-01 83.1% 92.7%
4941739 3156.1.1.13 ↗ beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cupredoxin_1 0.55 41.0 4.05e-01 79.8% 82.1%
362190 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.55 41.0 3.27e-01 80.9% 77.9%
4637253 207.2.1.58 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Chlam_PMP+ChlamPMP_M 0.54 46.0 2.81e-01 94.4% 34.8%
3232061 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.53 40.0 2.93e-01 84.3% 40.0%
5009533 314.1.1.12 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › LplA-B_cat 0.53 38.0 2.77e-01 75.3% 97.3%
222368 3156.1.1.13 ↗ beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cupredoxin_1 0.53 46.0 4.52e-01 100.0% 95.9%
4984486 11.1.1.138 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NPCBM_assoc 0.52 40.0 3.82e-01 93.3% 70.5%
5007008 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 39.0 3.70e-01 93.3% 69.1%