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MF360958.1__ASV44240.1__PBI_SCTP2_225__00225

Bact-Vir

MF360958.1__ASV44240.1__PBI_SCTP2_225__00225

Identity

Accession:
MF360958 ↗
Kingdom:
phage

Quality

89.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-82
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3m66A00 1.25.70.10 Mainly Alpha › Alpha Horseshoe › Transcription termination factor 3, mitochondrial › Transcription termination factor 3, mitochondrial 0.56 39.0 2.72e-01 72.5% 27.8%
4q5eA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.55 32.0 3.14e-01 78.8% 49.5%
3aqfB00 4.10.1240.10 Few Secondary Structures › Irregular › Hormone receptor fold › GPCR, family 2, extracellular hormone receptor domain 0.54 41.0 3.91e-01 82.5% 93.8%
2ghfA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.53 39.0 3.84e-01 80.0% 87.6%
3nrtA00 6.20.350.10 Special › Other non-globular › Actin; Chain A, domain 4 › 0.53 35.0 3.39e-01 70.0% 59.1%
4f9cA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.52 39.0 3.06e-01 92.5% 34.2%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3784432 4336.2.1.1 alpha duplicates or obligate multimers › YheA/YmcA-like › Protein SUS1 › Protein SUS1 › EnY2 0.63 50.0 4.54e-01 86.3% 100.0%
3390617 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.62 47.0 3.99e-01 80.0% 55.4%
4943757 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.50 33.0 3.58e-01 98.8% 83.1%
D2 high residues 190-340
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4v1gA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.67 25.0 3.24e-01 78.1% 57.6%
2cdqA02 1.20.120.1320 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartokinase, catalytic domain 0.62 31.0 3.80e-01 90.7% 73.2%
1u00A02 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.55 31.0 3.65e-01 98.0% 82.3%
2uuiA00 1.20.120.550 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain 0.54 29.0 2.97e-01 93.4% 49.7%
1dkxA02 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.53 27.0 3.47e-01 92.7% 88.7%
2yfaB01 1.20.1440.210 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.51 31.0 3.41e-01 94.0% 73.1%
1sziA02 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.51 28.0 2.93e-01 91.4% 55.5%
3m8jA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.51 26.0 3.21e-01 76.2% 77.8%
2yw6B00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.50 30.0 3.05e-01 100.0% 56.7%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4971986 3651.1.1.1 alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B 0.63 30.0 3.46e-01 89.4% 60.0%
4964086 2004.1.1.1218 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PilB3_C 0.54 45.0 3.14e-01 89.4% 54.4%