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MF360958.1__ASV44253.1__PBI_SCTP2_238__00238

Bact-Vir

MF360958.1__ASV44253.1__PBI_SCTP2_238__00238

Identity

Accession:
MF360958 ↗
Kingdom:
phage

Quality

88.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Salicola_phage_SCTP-2

TaxID: 2015814

Cluster

View cluster (33 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-121
PDB
Domain cluster: rep: LC168164.1__BAX25562.1__BPT24_244__00240__D16-115
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04965.20 best GPW_gp25 33.6 3.80e-08 77.9% 74.0%
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hrzB00 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.86 72.0 6.98e-01 86.7% 81.3%
2ia7A00 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.83 71.0 7.25e-01 90.3% 93.7%
1z9fA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.76 30.0 3.44e-01 93.8% 47.2%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 33.0 4.19e-01 99.1% 84.6%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 34.0 4.24e-01 78.8% 84.1%
4o8sA01 3.10.450.620 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › JHP933, nucleotidyltransferase-like core domain 0.64 53.0 5.12e-01 87.6% 82.4%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.64 29.0 3.85e-01 86.7% 82.1%
1ufvA02 3.30.1300.10 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain 0.62 51.0 5.41e-01 97.3% 100.0%
1ni9A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.62 49.0 4.47e-01 85.0% 70.9%
1qwdB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 39.0 3.43e-01 72.6% 43.4%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 33.0 3.98e-01 100.0% 78.7%
3l4gC04 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.59 45.0 3.39e-01 80.5% 91.6%
4mb4A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 37.0 4.30e-01 100.0% 92.4%
1pfsA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 25.0 2.97e-01 100.0% 57.7%
2k50A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 28.0 2.98e-01 100.0% 54.8%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 31.0 3.80e-01 74.3% 90.3%
3d9wA02 2.40.128.150 Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases 0.52 34.0 3.59e-01 79.6% 74.5%
4dy0B02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.52 28.0 2.77e-01 100.0% 44.5%
5jtwA03 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 41.0 3.98e-01 86.7% 95.3%
2r78C00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.50 33.0 3.35e-01 73.5% 65.5%
ECOD (28)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3981113 283.2.1.1 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 0.87 77.0 7.88e-01 100.0% 97.2%
5004672 283.2.1.1 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 0.86 82.0 8.00e-01 100.0% 97.5%
3965272 283.2.1.1 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 0.85 75.0 7.79e-01 96.5% 100.0%
3948020 283.2.1.1 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 0.85 76.0 7.73e-01 100.0% 98.2%
2907089 283.2.1.1 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 0.84 65.0 6.54e-01 79.6% 85.7%
4957572 283.2.1.9 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Sheath_initiator 0.84 78.0 7.34e-01 100.0% 98.5%
3966072 283.2.1.1 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 0.83 74.0 7.62e-01 100.0% 99.1%
4888824 283.2.1.1 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 0.82 72.0 6.96e-01 92.9% 86.4%
3966797 283.2.1.1 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 0.82 68.0 6.82e-01 86.7% 89.6%
4083689 283.2.1.1 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 0.81 68.0 6.98e-01 98.2% 90.8%
4988107 283.2.1.9 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Sheath_initiator 0.81 65.0 6.59e-01 86.7% 86.4%
5062717 283.2.1.1 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 0.80 69.0 6.91e-01 91.2% 91.3%
3941521 283.2.1.0 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like 0.77 70.0 7.03e-01 97.3% 100.0%
4140244 283.2.1.9 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Sheath_initiator 0.77 71.0 7.08e-01 99.1% 98.3%
3979092 283.2.1.1 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 0.76 69.0 6.87e-01 99.1% 93.9%
3466584 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 27.0 3.58e-01 81.4% 58.5%
5067760 283.1.1.0 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase 0.69 48.0 5.23e-01 86.7% 88.9%
4968521 283.1.1.0 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase 0.68 49.0 5.40e-01 85.0% 94.4%
4984581 283.1.1.0 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase 0.63 54.0 4.77e-01 100.0% 64.2%
4804225 9.1.1.11 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2 0.61 38.0 4.26e-01 71.7% 80.5%
842 9.1.1.11 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2 0.61 39.0 3.39e-01 72.6% 43.1%
3407007 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.59 39.0 3.38e-01 75.2% 44.1%
5004108 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 30.0 3.24e-01 100.0% 57.0%
3891618 316.1.1.10 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Nrap 0.58 48.0 3.72e-01 91.2% 60.4%
5044712 4272.1.1.1 ↗ a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.54 37.0 3.43e-01 100.0% 55.0%
3473974 218.1.1.0 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like 0.51 37.0 3.44e-01 75.2% 80.0%
3501948 2007.1.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like 0.51 44.0 3.76e-01 97.3% 80.0%
3324335 881.1.1.1 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.50 44.0 3.86e-01 97.3% 96.5%