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MF360958.1__ASV44265.1__PBI_SCTP2_250__00250
Bact-VirMF360958.1__ASV44265.1__PBI_SCTP2_250__00250
Identity
- Accession:
- MF360958 ↗
- Kingdom:
- phage
Quality
82.9
mean pLDDT
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-166
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jiuA00 | 3.30.2010.10 | Alpha Beta › 2-Layer Sandwich › Zincin-like › "Metalloproteases (""zincins""), catalytic domain" | 0.68 | 30.0 | 3.71e-01 | 86.0% | 63.8% |
| 3dteA01 | 1.10.10.2910 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.67 | 38.0 | 4.47e-01 | 99.4% | 77.8% |
| 1e1dA02 | 1.20.1270.20 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.59 | 31.0 | 4.22e-01 | 76.2% | 98.8% |
| 2ejqB00 | 3.30.2010.20 | Alpha Beta › 2-Layer Sandwich › Zincin-like › | 0.59 | 35.0 | 4.08e-01 | 85.4% | 82.6% |
| 3lmcA00 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.57 | 46.0 | 4.37e-01 | 84.1% | 81.7% |
| 1f3mA00 | 3.90.810.10 | Alpha Beta › Alpha-Beta Complex › SerineThreonine-protein kinase PAK-alpha; Chain A › CRIB domain | 0.54 | 24.0 | 3.43e-01 | 98.2% | 91.4% |
| 1iq0A03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.54 | 27.0 | 3.21e-01 | 87.8% | 67.2% |
| 4hy1A02 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.52 | 31.0 | 3.23e-01 | 77.4% | 60.8% |
| 1eb6A00 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.52 | 35.0 | 3.48e-01 | 99.4% | 63.8% |
| 3pm6A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 41.0 | 3.45e-01 | 84.1% | 96.2% |
| 3lnuA02 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.51 | 32.0 | 3.24e-01 | 76.2% | 62.1% |
| 4yshA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 39.0 | 3.59e-01 | 82.9% | 92.0% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3219554 | 103.12.1.0 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain | 0.73 | 22.0 | 4.09e-01 | 76.8% | 90.0% |
| 3519421 | 2498.1.1.62 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M76 | 0.63 | 37.0 | 3.67e-01 | 87.2% | 55.3% |
| 5039274 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.62 | 39.0 | 3.95e-01 | 90.9% | 63.7% |
| 4929397 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.60 | 35.0 | 3.92e-01 | 87.2% | 71.5% |
| 5065597 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.60 | 38.0 | 3.92e-01 | 90.2% | 64.4% |
| 4458442 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.59 | 34.0 | 4.12e-01 | 83.5% | 83.6% |
| 3984022 | 2498.1.1.63 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Zn_peptidase | 0.58 | 40.0 | 3.97e-01 | 87.2% | 66.5% |
| 138155 | 2498.1.1.35 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M54 | 0.57 | 46.0 | 4.37e-01 | 84.1% | 81.7% |
| 4033886 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.53 | 29.0 | 3.67e-01 | 79.3% | 88.0% |
| 3696312 | 604.39.1.12 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › VTT_dom | 0.52 | 34.0 | 3.72e-01 | 91.5% | 77.9% |
| 5057884 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.51 | 34.0 | 3.77e-01 | 89.6% | 82.2% |
| 3390114 | 1075.1.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane | 0.51 | 45.0 | 3.72e-01 | 95.1% | 70.2% |
D2
high
residues 173-279
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 44.0 | 4.97e-01 | 85.0% | 79.3% |
| 1v4aA01 | 1.10.4050.10 | Mainly Alpha › Orthogonal Bundle › Nucleotidyltransferase substrate binding subunit/domain fold › Glutamine synthase adenylyltransferase GlnE | 0.62 | 38.0 | 3.80e-01 | 86.0% | 60.6% |
| 2icwG02 | 1.10.10.530 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › mam-mhc complex, Chain D, Domain 2 | 0.59 | 37.0 | 4.03e-01 | 85.0% | 75.3% |
| 6d2qA02 | 1.20.80.10 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.59 | 35.0 | 3.63e-01 | 94.4% | 60.6% |
| 4dnjA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.58 | 51.0 | 3.50e-01 | 100.0% | 76.2% |
| 3oftA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.57 | 50.0 | 3.44e-01 | 99.1% | 81.1% |
| 4fypB00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.56 | 42.0 | 3.36e-01 | 79.4% | 96.8% |
| 5xdcB01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.55 | 37.0 | 3.70e-01 | 83.2% | 65.8% |
| 4nooB00 | 1.10.8.1160 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.55 | 35.0 | 3.73e-01 | 76.6% | 72.6% |
| 1qv9A02 | 6.10.140.120 | Special › Helix non-globular › Helix Hairpins › | 0.55 | 29.0 | 3.04e-01 | 76.6% | 52.4% |
| 2cazE00 | 1.20.1440.200 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Vps28 N-terminal domain | 0.54 | 34.0 | 3.56e-01 | 85.0% | 66.3% |
| 2jbrA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.54 | 40.0 | 3.93e-01 | 93.5% | 70.6% |
| 6wfqC01 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.54 | 47.0 | 4.34e-01 | 97.2% | 95.1% |
| 1ezvC00 | 1.20.810.10 | Mainly Alpha › Up-down Bundle › Cytochrome Bc1 Complex; Chain C › Cytochrome Bc1 Complex; Chain C | 0.53 | 41.0 | 2.81e-01 | 81.3% | 89.1% |
| 2fd5A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 40.0 | 3.79e-01 | 89.7% | 65.2% |
| 5c5sB00 | 1.10.555.10 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein | 0.52 | 43.0 | 3.64e-01 | 97.2% | 70.3% |
| 1w9rA00 | 1.20.58.440 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › choline binding protein A | 0.51 | 32.0 | 3.13e-01 | 71.0% | 56.3% |
| 4fqgB03 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.51 | 32.0 | 3.80e-01 | 84.1% | 100.0% |
| 3ck6C02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.51 | 37.0 | 3.64e-01 | 76.6% | 71.4% |
| 7jgsG02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 36.0 | 3.78e-01 | 80.4% | 80.6% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 40.0 | 3.87e-01 | 83.2% | 82.5% |
| 1ikpA02 | 3.90.1350.10 | Alpha Beta › Alpha-Beta Complex › Exotoxin A, middle domain › Exotoxin A, middle domain | 0.51 | 35.0 | 3.17e-01 | 71.0% | 75.9% |
| 5dqqA01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.50 | 43.0 | 4.10e-01 | 95.3% | 96.1% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3251129 | 5054.1.1.9 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › PKD_channel | 0.69 | 47.0 | 3.37e-01 | 70.1% | 30.0% |
| 4026470 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.66 | 37.0 | 3.27e-01 | 71.0% | 37.3% |
| 3483556 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.64 | 44.0 | 3.32e-01 | 70.1% | 35.1% |
| 3395749 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.63 | 49.0 | 4.53e-01 | 82.2% | 87.4% |
| 3929377 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.62 | 38.0 | 4.22e-01 | 78.5% | 76.5% |
| 3596019 | 109.46.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) | 0.61 | 40.0 | 3.83e-01 | 98.1% | 56.8% |
| 3644899 | 3755.3.1.121 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Sin3_corepress | 0.60 | 37.0 | 3.45e-01 | 87.9% | 50.8% |
| 5081307 | 159.1.2.1 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PRA-PH | 0.59 | 35.0 | 3.75e-01 | 84.1% | 66.7% |
| 3426723 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.57 | 45.0 | 3.99e-01 | 85.0% | 97.5% |
| 3518706 | 197.1.1.0 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like | 0.57 | 39.0 | 3.74e-01 | 91.6% | 60.0% |
| 3287294 | 109.4.1.2330 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF31120 | 0.56 | 31.0 | 3.34e-01 | 88.8% | 61.1% |
| 5010018 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.56 | 40.0 | 3.32e-01 | 90.7% | 41.6% |
| 3684672 | 621.1.1.3 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Sey1_3HB | 0.56 | 43.0 | 4.46e-01 | 94.4% | 88.0% |
| 5066847 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.56 | 37.0 | 3.98e-01 | 81.3% | 80.0% |
| 3337686 | 5086.1.1.64 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › Sin3_corepress | 0.55 | 38.0 | 3.70e-01 | 87.9% | 63.3% |
| 5049049 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.55 | 50.0 | 3.99e-01 | 100.0% | 81.7% |
| 3286008 | 5050.1.1.52 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › CNNM | 0.55 | 41.0 | 3.55e-01 | 77.6% | 57.0% |
| 3242284 | 1075.1.2.13 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › CNNM | 0.54 | 38.0 | 3.36e-01 | 74.8% | 50.7% |
| 3697545 | 101.1.17.21 ↗ | alpha arrays › HTH › HTH › FF domain › Tri-helical | 0.54 | 40.0 | 4.21e-01 | 84.1% | 89.5% |
| 3981317 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.53 | 45.0 | 3.61e-01 | 90.7% | 76.4% |
| 3945652 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.52 | 38.0 | 3.11e-01 | 90.7% | 39.2% |
| 3989254 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.52 | 35.0 | 3.76e-01 | 75.7% | 78.9% |
| 4143568 | 192.7.1.3 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Phe_tRNA-synt_N | 0.52 | 35.0 | 3.70e-01 | 87.9% | 81.1% |
| 5078867 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.51 | 39.0 | 4.21e-01 | 100.0% | 100.0% |
| 4559285 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.50 | 32.0 | 3.49e-01 | 80.4% | 76.7% |