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MF360958.1ASV44460.1PBI_SCTP2_445__00445

Bact-Vir

MF360958.1__ASV44460.1__PBI_SCTP2_445__00445

Identity

Accession:: MF360958 ↗
Kingdom:: phage

Quality

92.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Salicola_phage_SCTP-2

TaxID: 2015814

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-56_75-113_174-211

PDB

Domain cluster: rep: MF360958.1__ASV44233.1__PBI_SCTP2_218__00218__D7-96_112-152_267-297

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2hw2A00	3.20.170.40	Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › Rifampin ADP-ribosyltransferase domain	0.68	49.0	4.80e-01	74.0%	73.9%
2auaA01	3.20.170.10	Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › ADP-ribosylation domain	0.64	47.0	5.13e-01	85.0%	90.7%
2rf5A00	3.90.228.10	Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 ›	0.57	48.0	4.11e-01	92.1%	72.0%
3of1A02	2.60.120.10	Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls	0.50	43.0	4.31e-01	100.0%	89.5%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3601121	10.12.1.0 ↗	beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix	0.53	37.0	3.23e-01	71.7%	82.1%
3186361	237.1.1.37 ↗	a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PF27671	0.50	39.0	3.31e-01	82.7%	61.5%

D2 medium residues 57-74_114-173

PDB

Domain cluster: representative

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3d6jA02	1.10.150.240	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2	0.62	35.0	3.73e-01	93.6%	62.7%
2lrmA00	1.10.890.30	Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › YmgD protein	0.57	42.0	4.11e-01	97.4%	73.8%
3gcgB00	1.10.4120.20	Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold ›	0.57	49.0	3.95e-01	96.2%	77.6%
2iw3A02	1.20.1390.20	Mainly Alpha › Up-down Bundle › PWI domain ›	0.56	40.0	3.88e-01	76.9%	96.7%
2hsbA00	1.20.120.330	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2	0.55	39.0	3.40e-01	75.6%	99.2%
1wh4A01	1.10.533.10	Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas	0.55	36.0	3.45e-01	97.4%	55.3%
1fc6A01	3.30.750.44	Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA ›	0.53	38.0	3.60e-01	97.4%	61.2%
3t38A01	1.10.8.1060	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Corynebacterium glutamicum thioredoxin-dependent arsenate reductase, N-terminal domain	0.51	39.0	4.05e-01	97.4%	93.0%
2l1nA00	1.10.418.90	Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Protein of unknown function DUF1823	0.51	38.0	3.35e-01	80.8%	80.0%
4bgdA03	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.50	34.0	3.27e-01	70.5%	73.3%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4011005	130.1.1.0 ↗	alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif	0.61	44.0	4.82e-01	93.6%	95.3%
1736237	171.1.1.4 ↗	alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3	0.60	49.0	4.21e-01	92.3%	76.9%
311021	101.22.1.1 ↗	alpha arrays › HTH › IscX-like (DEPRECATED) › IscX-like (DEPRECATED) › Fe-S_assembly (DEPRECATED)	0.52	31.0	3.31e-01	75.6%	68.2%
4929256	192.29.1.154 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › CopD	0.52	44.0	2.91e-01	97.4%	46.7%
119253	3154.1.1.1 ↗	alpha bundles › YP_399305.1 › YP_399305.1 › YP_399305.1 › DUF1823	0.51	38.0	3.35e-01	80.8%	80.0%