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MF360958.1__ASV44473.1__PBI_SCTP2_458__00458
Bact-VirMF360958.1__ASV44473.1__PBI_SCTP2_458__00458
Identity
- Accession:
- MF360958 ↗
- Kingdom:
- phage
Quality
58.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 37-128
Domain cluster:
rep: FFSP_09252017_12_scaffold_64_prodigal-single.1__X__X__00333__D185-261
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1nxiA00 | 3.30.70.970 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RraB-like | 0.60 | 41.0 | 3.66e-01 | 100.0% | 48.5% |
| 1b7yB06 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.59 | 44.0 | 4.58e-01 | 100.0% | 86.0% |
| 3onrJ00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.58 | 41.0 | 4.63e-01 | 92.4% | 100.0% |
| 6urtA02 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 43.0 | 4.44e-01 | 100.0% | 84.1% |
| 6vh5C03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.56 | 38.0 | 3.92e-01 | 100.0% | 73.0% |
| 6wubf01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.55 | 41.0 | 4.12e-01 | 98.9% | 78.7% |
| 5aj3F00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.54 | 42.0 | 3.84e-01 | 98.9% | 62.6% |
| 2jdjA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 39.0 | 3.77e-01 | 98.9% | 67.3% |
| 1yreC00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 36.0 | 2.96e-01 | 100.0% | 35.2% |
| 3bdeB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 40.0 | 3.91e-01 | 100.0% | 74.7% |
| 3k5iA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.53 | 36.0 | 2.81e-01 | 100.0% | 32.3% |
| 1rtzA00 | 3.30.70.560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK | 0.52 | 39.0 | 3.35e-01 | 100.0% | 48.7% |
| 2qpvA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 46.0 | 4.12e-01 | 100.0% | 87.1% |
| 1nslA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 33.0 | 2.68e-01 | 85.9% | 33.0% |
| 2il5A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 46.0 | 3.83e-01 | 100.0% | 85.2% |
| 4l0fA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.51 | 43.0 | 2.86e-01 | 96.7% | 65.9% |
| 1b64A00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.50 | 34.0 | 3.46e-01 | 100.0% | 70.3% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4871888 | 226.1.1.4 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB_2 | 0.65 | 45.0 | 4.73e-01 | 94.6% | 80.2% |
| 3823137 | 304.126.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.63 | 45.0 | 3.88e-01 | 100.0% | 49.3% |
| 3718256 | 304.6.1.2 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › ALO | 0.63 | 44.0 | 3.05e-01 | 97.8% | 23.1% |
| 3569962 | 4323.1.1.1 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.61 | 45.0 | 4.48e-01 | 100.0% | 73.7% |
| 4451470 | 304.126.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.61 | 45.0 | 3.95e-01 | 100.0% | 53.8% |
| 3579336 | 304.5.1.23 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › V_ATPase_I | 0.60 | 43.0 | 4.04e-01 | 100.0% | 62.7% |
| 4515208 | 304.24.1.7 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › V_ATPase_I | 0.60 | 43.0 | 3.97e-01 | 100.0% | 60.0% |
| 5010925 | 304.45.1.1 ↗ | a+b two layers › Alpha-beta plaits › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › HPPK | 0.59 | 41.0 | 3.45e-01 | 100.0% | 40.6% |
| 3350776 | 304.5.1.23 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › V_ATPase_I | 0.59 | 41.0 | 4.41e-01 | 96.7% | 82.5% |
| 3555669 | 304.126.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.59 | 43.0 | 3.88e-01 | 100.0% | 57.5% |
| 3184391 | 304.126.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.59 | 42.0 | 3.94e-01 | 98.9% | 61.8% |
| 3675598 | 304.126.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.58 | 42.0 | 4.17e-01 | 100.0% | 72.6% |
| 3522520 | 304.126.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.57 | 41.0 | 4.39e-01 | 98.9% | 85.0% |
| 3929632 | 304.126.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.57 | 41.0 | 3.93e-01 | 100.0% | 64.8% |
| 3706885 | 304.126.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.57 | 41.0 | 4.05e-01 | 100.0% | 69.0% |
| 3820425 | 3758.1.1.105 ↗ | alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins › Msl2-3_C | 0.57 | 45.0 | 4.29e-01 | 100.0% | 73.3% |
| 3324106 | 304.45.1.1 ↗ | a+b two layers › Alpha-beta plaits › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › HPPK | 0.55 | 40.0 | 3.23e-01 | 100.0% | 38.9% |
| 2093009 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.55 | 42.0 | 4.17e-01 | 100.0% | 79.2% |
| 2798195 | 304.45.1.1 ↗ | a+b two layers › Alpha-beta plaits › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › HPPK | 0.55 | 39.0 | 3.27e-01 | 100.0% | 41.2% |
| 4167213 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.54 | 39.0 | 3.88e-01 | 100.0% | 71.0% |
| 4809499 | 304.109.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e | 0.53 | 38.0 | 3.99e-01 | 95.7% | 82.4% |
| 2733816 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.53 | 39.0 | 3.97e-01 | 98.9% | 79.6% |
| 4378200 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.53 | 40.0 | 3.73e-01 | 100.0% | 63.3% |
| 3340180 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.52 | 40.0 | 3.93e-01 | 100.0% | 76.0% |
| 5023942 | 304.48.1.32 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › TiaS-FLD | 0.52 | 41.0 | 3.43e-01 | 100.0% | 48.8% |
| 3236767 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.52 | 44.0 | 4.39e-01 | 98.9% | 90.5% |
| 5028399 | 872.1.1.1 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N | 0.51 | 38.0 | 4.18e-01 | 83.7% | 98.7% |
| 4994786 | 872.1.1.1 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N | 0.51 | 38.0 | 4.13e-01 | 82.6% | 98.7% |
D2
high
residues 136-214