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MF360958.1__ASV44500.1__PBI_SCTP2_485__00485
Bact-VirMF360958.1__ASV44500.1__PBI_SCTP2_485__00485
Identity
- Accession:
- MF360958 ↗
- Kingdom:
- phage
Quality
67.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-65
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ekhA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.82 | 49.0 | 4.26e-01 | 85.5% | 41.2% |
| 1ov3A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.76 | 46.0 | 4.62e-01 | 96.4% | 60.0% |
| 3npfB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.75 | 46.0 | 4.37e-01 | 92.7% | 51.5% |
| 4ytlA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 46.0 | 4.85e-01 | 96.4% | 70.0% |
| 6uzjA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.73 | 46.0 | 4.40e-01 | 94.5% | 55.6% |
| 2pqhB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 44.0 | 4.22e-01 | 87.3% | 52.3% |
| 1oxxK02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 53.0 | 5.67e-01 | 100.0% | 97.8% |
| 1gcqB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 45.0 | 4.52e-01 | 87.3% | 59.6% |
| 1ybyA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 53.0 | 5.05e-01 | 100.0% | 71.9% |
| 1ex4B02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.68 | 42.0 | 4.18e-01 | 87.3% | 57.6% |
| 1x43A01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 44.0 | 4.29e-01 | 87.3% | 58.1% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 46.0 | 4.28e-01 | 85.5% | 59.7% |
| 2l0cA00 | 2.40.50.660 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 54.0 | 4.52e-01 | 100.0% | 67.0% |
| 2bzyA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 39.0 | 3.81e-01 | 87.3% | 54.8% |
| 6gbuD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 42.0 | 4.10e-01 | 87.3% | 62.5% |
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 41.0 | 4.10e-01 | 92.7% | 68.4% |
| 2rqrA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 39.0 | 3.17e-01 | 87.3% | 31.1% |
| 1cv8A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.58 | 47.0 | 3.37e-01 | 92.7% | 39.3% |
| 1wi5A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 47.0 | 4.28e-01 | 100.0% | 69.3% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 34.0 | 3.35e-01 | 96.4% | 53.1% |
| 3bfmA02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 31.0 | 3.40e-01 | 80.0% | 72.1% |
| 1vu2300 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 36.0 | 2.80e-01 | 74.5% | 55.1% |
| 4g54A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.51 | 35.0 | 2.83e-01 | 92.7% | 32.8% |
| 1v9nA02 | 3.30.1370.60 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, NADPH binding domain | 0.50 | 41.0 | 2.83e-01 | 100.0% | 54.1% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 44.0 | 3.70e-01 | 100.0% | 81.2% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3637508 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.76 | 52.0 | 4.91e-01 | 98.2% | 60.0% |
| 2834765 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.76 | 45.0 | 4.21e-01 | 96.4% | 47.8% |
| 3938908 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 49.0 | 4.49e-01 | 94.5% | 52.9% |
| 3347851 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.73 | 46.0 | 4.29e-01 | 85.5% | 50.0% |
| 3656401 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 48.0 | 4.41e-01 | 85.5% | 50.7% |
| 1673571 | 4.1.1.120 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_16 | 0.71 | 46.0 | 4.16e-01 | 98.2% | 48.7% |
| 2893010 | 4.1.1.8 ↗ | beta barrels › SH3 › SH3 › SH3 › IN_DBD_C | 0.70 | 45.0 | 4.54e-01 | 92.7% | 66.7% |
| 3789233 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.67 | 46.0 | 4.38e-01 | 92.7% | 58.5% |
| 4286961 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.59 | 47.0 | 4.46e-01 | 100.0% | 72.9% |
| 3539840 | 2.1.1.188 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSDE1 | 0.58 | 49.0 | 4.32e-01 | 100.0% | 91.8% |
| None | — | 0.57 | 45.0 | 2.78e-01 | 89.1% | 25.1% | |
| 4587235 | 220.1.1.197 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF28623 | 0.53 | 40.0 | 3.31e-01 | 87.3% | 56.5% |
| 4064637 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 44.0 | 3.38e-01 | 100.0% | 40.0% |
| 5057085 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 40.0 | 3.14e-01 | 89.1% | 79.2% |