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MF360958.1__ASV44534.1__PBI_SCTP2_519__00519

Bact-Vir

MF360958.1__ASV44534.1__PBI_SCTP2_519__00519

Identity

Accession:
MF360958 ↗
Kingdom:
phage

Quality

82.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Salicola_phage_SCTP-2

TaxID: 2015814

Cluster

View cluster (14 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 34-152
PDB
Domain cluster: rep: JSantini_GMIN_scaffold_8_prodigal-single.1__X__X__00271__D25-165
CATH (61)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1bxwA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.82 77.0 6.70e-01 100.0% 95.3%
1p4tA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.79 74.0 6.70e-01 100.0% 97.4%
3gp6A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.78 73.0 6.65e-01 100.0% 84.5%
2ervA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.76 69.0 6.35e-01 97.5% 100.0%
6x1kA01 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.75 68.0 6.95e-01 100.0% 100.0%
3g7gH00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.73 60.0 5.51e-01 87.4% 90.1%
4puxA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.71 59.0 5.33e-01 87.4% 89.2%
3dzmB00 2.40.160.70 Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. 0.70 64.0 5.32e-01 100.0% 97.5%
4fuvA00 2.40.160.170 Mainly Beta › Beta Barrel › Porin › 0.69 63.0 5.19e-01 100.0% 100.0%
1aqbA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 57.0 5.00e-01 99.2% 70.3%
4qrlA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.63 54.0 5.62e-01 99.2% 100.0%
2o4vA00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.62 55.0 3.81e-01 97.5% 91.7%
2qomB00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.62 55.0 4.28e-01 100.0% 98.1%
3qq2B00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.62 56.0 4.39e-01 100.0% 96.8%
2c4iA01 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.61 56.0 5.63e-01 99.2% 99.2%
6wilA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.61 53.0 3.82e-01 95.8% 94.6%
4c4vB02 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.60 51.0 3.61e-01 92.4% 97.0%
3soyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 52.0 4.88e-01 92.4% 88.7%
1idpA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 51.0 4.75e-01 92.4% 91.8%
3f7xA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 51.0 4.97e-01 93.3% 91.0%
4l8oA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 50.0 4.47e-01 91.6% 73.8%
3kvnA02 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.59 52.0 3.91e-01 100.0% 91.9%
2rckA01 3.15.10.30 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › TULIP domain 0.58 53.0 4.33e-01 100.0% 84.9%
2rcqA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 53.0 5.01e-01 100.0% 95.7%
4e1sA00 2.40.160.160 Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain 0.58 52.0 4.14e-01 99.2% 93.0%
3nv0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 50.0 4.19e-01 92.4% 86.2%
1bh3A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.57 41.0 3.09e-01 73.9% 42.2%
3dwoX00 2.40.160.60 Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.57 52.0 3.48e-01 99.2% 60.6%
1ealA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 51.0 5.06e-01 100.0% 100.0%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 51.0 5.02e-01 99.2% 100.0%
2f1cX00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.57 52.0 4.03e-01 100.0% 98.8%
1p6pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 51.0 5.01e-01 97.5% 100.0%
4afkA00 2.40.160.100 Mainly Beta › Beta Barrel › Porin › 0.56 47.0 3.28e-01 92.4% 96.5%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 51.0 4.77e-01 100.0% 93.3%
3ub1A01 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 48.0 4.58e-01 91.6% 86.8%
4gf4A00 2.40.160.180 Mainly Beta › Beta Barrel › Porin › Carbohydrate-selective porin OprB 0.56 49.0 3.64e-01 95.0% 89.3%
4fqeA00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.56 50.0 4.44e-01 97.5% 98.2%
2byoA00 2.50.20.20 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.56 50.0 4.32e-01 97.5% 93.4%
1uynX00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.56 49.0 3.82e-01 99.2% 74.2%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 50.0 4.82e-01 99.2% 97.8%
2ckfB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 49.0 4.35e-01 95.8% 94.1%
3ebyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 48.0 4.46e-01 95.0% 95.4%
1vyfA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 50.0 4.79e-01 99.2% 100.0%
1o8vA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 50.0 4.81e-01 100.0% 99.2%
4c00A04 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.54 48.0 3.55e-01 96.6% 56.7%
7snsB01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 48.0 4.39e-01 99.2% 99.4%
3njtA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.54 49.0 3.61e-01 98.3% 92.1%
5dl7A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.54 44.0 3.14e-01 90.8% 95.8%
6c1zA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 49.0 4.67e-01 100.0% 95.7%
2a0aA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 47.0 4.64e-01 99.2% 100.0%
4r7kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 46.0 4.15e-01 95.8% 74.4%
6wimA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.53 47.0 3.31e-01 95.8% 58.7%
3eniC00 2.50.10.10 Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A 0.53 48.0 3.41e-01 99.2% 59.8%
4k02A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 38.0 3.81e-01 76.5% 99.2%
4epaA00 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.52 44.0 2.83e-01 94.1% 82.3%
3sy9C01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.52 44.0 3.22e-01 94.1% 95.8%
6fokB01 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.52 45.0 2.85e-01 95.0% 82.8%
1tlyA00 2.40.230.20 Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Nucleoside-specific channel-forming protein, Tsx-like 0.52 46.0 3.64e-01 98.3% 57.4%
2porA00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.52 45.0 3.39e-01 96.6% 61.1%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.51 43.0 4.03e-01 94.1% 85.2%
5nz7A01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.51 38.0 2.82e-01 79.0% 79.6%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3967771 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.88 84.0 8.09e-01 99.2% 97.7%
2716251 5084.1.1.10 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.83 75.0 7.50e-01 100.0% 94.2%
4279299 5084.1.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpA_membrane 0.81 76.0 6.48e-01 100.0% 98.3%
4512746 5084.1.1.9 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PagL 0.81 76.0 6.84e-01 100.0% 94.9%
4197411 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.80 76.0 6.25e-01 100.0% 95.5%
4042627 5084.1.1.10 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.80 76.0 6.64e-01 100.0% 98.8%
3385673 5084.1.1.10 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.80 76.0 6.75e-01 100.0% 91.9%
3839690 5084.1.1.15 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.80 75.0 6.22e-01 99.2% 99.5%
4537321 5084.1.1.4 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity 0.80 75.0 6.42e-01 100.0% 90.6%
4251489 5084.1.1.10 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.79 74.0 5.74e-01 100.0% 98.8%
3838164 5084.1.1.15 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.79 74.0 6.30e-01 100.0% 97.8%
3840054 5084.1.1.15 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.79 64.0 6.06e-01 84.9% 99.3%
3838829 5084.1.1.15 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.79 74.0 6.27e-01 100.0% 97.3%
3970312 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.78 73.0 6.26e-01 100.0% 98.3%
3839285 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.78 74.0 6.23e-01 100.0% 99.5%
4417262 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.78 73.0 6.44e-01 100.0% 98.8%
4063158 5084.1.1.7 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PagP 0.78 72.0 6.41e-01 100.0% 87.3%
191268 5084.1.1.9 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PagL 0.76 69.0 6.35e-01 97.5% 100.0%
169832 5084.1.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpA_membrane 0.74 69.0 5.67e-01 100.0% 84.1%
4222629 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.74 68.0 6.17e-01 100.0% 99.4%
3632198 9.13.1.4 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3237 0.70 60.0 5.43e-01 92.4% 81.2%
4863129 5084.1.1.4 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity 0.66 57.0 5.87e-01 99.2% 100.0%
3974058 5084.5.1.28 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › CopB 0.65 59.0 4.89e-01 99.2% 97.1%
1112109 883.1.1.2 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C 0.65 47.0 3.81e-01 75.6% 67.8%
3971437 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.65 59.0 4.79e-01 98.3% 66.1%
4191031 5084.3.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter 0.63 58.0 4.26e-01 100.0% 84.2%
4450761 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.63 57.0 4.11e-01 100.0% 79.3%
4677412 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.62 57.0 4.13e-01 100.0% 84.9%
4677413 5084.3.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter 0.62 56.0 4.14e-01 100.0% 84.3%
3964572 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.61 56.0 4.18e-01 100.0% 83.6%
4356082 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.61 54.0 4.00e-01 100.0% 91.8%
3334482 9.23.1.4 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 › PAP_fibrillin 0.61 54.0 4.79e-01 99.2% 92.6%
3724449 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.61 42.0 4.76e-01 79.0% 94.4%
3967388 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.61 56.0 4.08e-01 100.0% 83.8%
4038477 5084.3.1.3 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › PF29188 0.59 54.0 3.97e-01 100.0% 82.2%
3405242 5084.5.1.37 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Attacin_N, Attacin_C 0.59 43.0 3.73e-01 75.6% 63.4%
4379627 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.59 54.0 3.96e-01 100.0% 83.5%
1094951 243.1.1.26 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.59 50.0 4.47e-01 91.6% 73.8%
3451281 71.1.1.12 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › DUF620 0.59 53.0 3.95e-01 100.0% 87.3%
3968316 5084.5.1.4 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD 0.58 51.0 3.50e-01 97.5% 98.9%
4006163 5084.5.4.13 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › DUF481, Porin_OmpG 0.58 52.0 3.90e-01 98.3% 97.3%
3829251 9.1.1.34 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › PAP_fibrillin 0.58 51.0 4.53e-01 97.5% 90.9%
4329332 5084.5.1.18 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › BCSC_C 0.58 52.0 3.63e-01 100.0% 89.5%
3944680 5084.5.3.7 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › BCSC_C 0.58 52.0 3.67e-01 100.0% 94.9%
3944999 5084.8.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore 0.57 41.0 2.79e-01 75.6% 21.4%
1298172 5084.5.1.8 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM 0.56 51.0 4.50e-01 99.2% 98.8%
3945018 5084.5.1.4 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD 0.56 46.0 3.30e-01 91.6% 95.4%
885 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.56 49.0 3.82e-01 99.2% 74.2%
3840092 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.56 49.0 3.50e-01 95.8% 96.9%
3971813 5084.8.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore 0.56 36.0 2.50e-01 74.8% 18.8%
3989353 9.9.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein YwiB › Hypothetical protein YwiB › DUF1934 0.55 48.0 4.79e-01 96.6% 100.0%
3879968 883.1.1.2 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C 0.55 49.0 4.00e-01 100.0% 82.2%
3969139 5084.5.1.4 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD 0.54 48.0 3.27e-01 98.3% 98.2%
5083090 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 41.0 3.04e-01 80.7% 44.1%
4458963 5084.5.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 0.54 47.0 3.38e-01 96.6% 76.5%
3839826 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.53 47.0 3.32e-01 100.0% 98.2%
4025861 4051.1.1.1 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.52 44.0 3.94e-01 93.3% 78.8%
3944979 5084.5.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 0.50 41.0 3.39e-01 89.1% 60.9%
4338986 5084.5.3.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel 0.50 44.0 2.99e-01 96.6% 99.3%