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MF370964.1__ASU03337.1__X__00050

Bact-Vir

MF370964.1__ASU03337.1__X__00050

Identity

Accession:
MF370964 ↗
Kingdom:
phage

Quality

89.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-75
PDB
Domain cluster: representative
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gfgA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.67 58.0 4.32e-01 97.3% 44.0%
2bs6A01 2.40.128.190 Mainly Beta › Beta Barrel › Lipocalin › 0.67 52.0 5.01e-01 84.9% 94.0%
4csdB00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.67 54.0 3.71e-01 90.4% 40.4%
7bwcA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.67 59.0 3.86e-01 100.0% 41.2%
1c5kA02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.66 58.0 3.99e-01 100.0% 71.1%
4eqaC00 2.40.128.650 Mainly Beta › Beta Barrel › Lipocalin › 0.66 54.0 4.35e-01 93.2% 71.3%
3o4hA01 2.130.10.150 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Peptidase/esterase 'gauge' domain 0.66 59.0 3.89e-01 100.0% 40.3%
3sreA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.65 58.0 3.75e-01 100.0% 67.2%
3hfqA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 56.0 3.65e-01 98.6% 39.4%
2r0hA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.65 56.0 4.39e-01 98.6% 57.5%
2aq5A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 56.0 3.64e-01 98.6% 31.6%
3s8zA02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.65 56.0 3.70e-01 98.6% 45.3%
2jkbA02 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.64 56.0 3.60e-01 100.0% 54.7%
4ftxB01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.64 52.0 4.43e-01 93.2% 57.0%
2acaA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.64 53.0 4.03e-01 95.9% 38.5%
7obmA01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.63 55.0 3.59e-01 97.3% 33.3%
2fblB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.63 43.0 3.44e-01 72.6% 35.1%
8hpoK01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 54.0 3.42e-01 98.6% 30.0%
3mepA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.62 54.0 4.10e-01 98.6% 83.8%
1yemB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.62 52.0 4.03e-01 97.3% 41.0%
2wdtC02 3.30.1490.420 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 0.62 50.0 4.61e-01 91.8% 71.3%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.62 53.0 4.26e-01 98.6% 79.2%
1yrzA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.61 52.0 3.90e-01 100.0% 67.8%
5hy7B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 52.0 3.31e-01 100.0% 28.9%
2giaB00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.60 51.0 4.11e-01 95.9% 84.2%
4h5iB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 51.0 3.35e-01 98.6% 55.4%
2xqyA01 3.30.500.50 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.60 51.0 3.94e-01 98.6% 93.3%
5upiA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.60 50.0 3.69e-01 91.8% 39.4%
3p0lD00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 44.0 3.27e-01 78.1% 34.1%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.58 45.0 3.52e-01 87.7% 41.8%
6mv2A01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 39.0 3.56e-01 71.2% 87.3%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.57 48.0 3.98e-01 97.3% 90.7%
1wquA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.57 45.0 3.92e-01 98.6% 56.1%
3ei3A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 48.0 3.20e-01 98.6% 38.4%
3asiA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 48.0 3.65e-01 95.9% 47.8%
1n7vA02 2.60.330.10 Mainly Beta › Sandwich › receptor-binding protein prd1-p2, domain 2 › receptor-binding protein prd1-p2, domain 2 0.56 48.0 4.14e-01 100.0% 91.1%
2ci9B00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.56 49.0 4.50e-01 100.0% 91.0%
1pz7A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 47.0 3.57e-01 95.9% 46.8%
2durB01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 46.0 3.33e-01 94.5% 69.0%
2r1bA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 46.0 3.44e-01 94.5% 64.1%
4nkbA01 3.30.1120.120 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.55 42.0 3.68e-01 83.6% 54.4%
5mc9A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 45.0 3.47e-01 95.9% 52.2%
2vt8A00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.54 43.0 3.61e-01 93.2% 70.6%
4akmB00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.54 44.0 3.61e-01 97.3% 54.1%
3rf9B02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.54 45.0 3.03e-01 93.2% 95.1%
3doaA01 2.30.310.10 Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain 0.53 39.0 3.17e-01 80.8% 56.2%
6fopA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.53 45.0 3.17e-01 94.5% 73.9%
1qw2A00 3.30.1980.10 Alpha Beta › 2-Layer Sandwich › Hypothetical protein Ta1206 fold › Hypothetical protein YunC 0.53 41.0 3.79e-01 89.0% 92.2%
1lf7A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 45.0 3.50e-01 97.3% 75.6%
1ospO02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.52 46.0 3.68e-01 100.0% 71.2%
5e1qA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.51 41.0 3.79e-01 89.0% 89.6%
2j7qA00 3.90.70.120 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.51 44.0 3.16e-01 100.0% 71.0%
2qm4A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.51 42.0 3.48e-01 95.9% 60.1%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.51 36.0 3.13e-01 90.4% 46.7%
2aaaA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.50 41.0 3.70e-01 89.0% 74.5%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3409624 5.1.4.32 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N 0.72 62.0 3.76e-01 95.9% 29.7%
3677365 312.1.1.19 a+b three layers › HIT-like › HIT-related › HIT-related › PF26216 0.70 60.0 4.71e-01 95.9% 97.4%
5011728 4210.1.1.0 a+b two layers › WGR domain › WGR domain › WGR domain 0.69 59.0 5.43e-01 95.9% 72.6%
3588533 868.1.1.1 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.68 59.0 4.40e-01 97.3% 44.7%
3387958 868.1.1.0 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related 0.68 48.0 3.77e-01 74.0% 35.5%
3257390 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.68 56.0 3.70e-01 91.8% 39.0%
3987480 868.1.1.1 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.68 58.0 4.39e-01 97.3% 45.4%
2336349 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.68 53.0 4.96e-01 84.9% 88.8%
4883226 5.1.3.21 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Fungal_lectin 0.68 53.0 4.89e-01 84.9% 84.9%
3258975 214.1.1.6 a+b two layers › SH2 › SH2 › SH2 › SH2_2 0.67 48.0 4.39e-01 91.8% 56.0%
3811762 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.67 59.0 3.85e-01 100.0% 52.0%
3931222 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.67 54.0 3.53e-01 89.0% 35.9%
5019887 243.3.1.3 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.66 45.0 4.57e-01 71.2% 86.3%
3431244 5.1.4.122 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF295 0.66 55.0 3.58e-01 93.2% 30.6%
1736408 5.1.3.134 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR, BNR_2 0.66 58.0 3.55e-01 100.0% 63.9%
3955040 3844.2.1.1 a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › ESX-1_EspG 0.66 57.0 3.89e-01 100.0% 63.3%
4019954 5.1.4.169 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.65 57.0 3.64e-01 98.6% 32.1%
3451989 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.65 58.0 3.78e-01 100.0% 94.1%
3814287 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.65 53.0 3.41e-01 93.2% 18.9%
4229035 2484.1.1.12 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase 0.64 53.0 3.96e-01 94.5% 38.5%
2723714 5.1.3.21 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Fungal_lectin 0.64 56.0 3.78e-01 98.6% 48.9%
3457141 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.64 56.0 3.69e-01 100.0% 67.2%
3514491 5.1.4.242 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N 0.64 55.0 3.51e-01 100.0% 47.4%
3612239 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.64 56.0 3.66e-01 98.6% 69.6%
3419526 5.1.5.146 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_AT5G49610-like 0.63 57.0 3.66e-01 100.0% 72.4%
3990350 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.63 55.0 3.62e-01 98.6% 40.6%
1687688 5.1.3.134 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR, BNR_2 0.63 55.0 3.40e-01 100.0% 63.9%
4226087 5.1.1.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › Hemopexin 0.63 47.0 3.33e-01 80.8% 56.1%
4966488 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.63 43.0 4.29e-01 71.2% 100.0%
3659226 5.1.3.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.63 55.0 3.90e-01 100.0% 54.8%
3546218 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 53.0 3.42e-01 97.3% 40.0%
5013176 4100.1.1.0 a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.62 49.0 4.94e-01 94.5% 89.3%
None 0.62 53.0 3.31e-01 95.9% 40.2%
5040136 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 54.0 3.37e-01 100.0% 34.7%
3198165 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.62 54.0 3.54e-01 100.0% 80.9%
4998507 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.62 41.0 4.63e-01 72.6% 94.4%
3465186 5.1.8.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 0.61 54.0 4.44e-01 97.3% 74.6%
3707278 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 53.0 3.79e-01 98.6% 65.3%
3706360 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 53.0 3.49e-01 100.0% 55.1%
3618512 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.61 52.0 3.62e-01 98.6% 44.4%
3233005 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.60 47.0 3.28e-01 93.2% 24.7%
3912292 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.60 50.0 3.20e-01 91.8% 22.0%
3244934 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.60 47.0 3.13e-01 95.9% 19.8%
3229953 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.59 52.0 3.43e-01 100.0% 38.4%
4001937 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.59 49.0 3.54e-01 97.3% 63.7%
3479960 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.59 51.0 3.33e-01 100.0% 88.7%
3411618 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.58 49.0 3.56e-01 95.9% 40.0%
3412515 5.1.4.37 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 0.58 49.0 2.98e-01 97.3% 35.6%
3327098 5.1.3.144 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like 0.58 50.0 3.34e-01 100.0% 65.9%
5014493 331.3.1.12 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › STK_08120-like 0.58 43.0 3.14e-01 94.5% 26.1%
5036897 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.58 47.0 3.85e-01 93.2% 56.6%
3484104 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.58 49.0 3.64e-01 98.6% 61.0%
None 0.58 50.0 3.28e-01 100.0% 36.5%
3332798 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.58 45.0 3.53e-01 89.0% 60.0%
3812869 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.58 49.0 4.50e-01 100.0% 82.0%
3433209 214.1.1.6 a+b two layers › SH2 › SH2 › SH2 › SH2_2 0.58 47.0 4.24e-01 91.8% 78.1%
5047088 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.58 50.0 3.59e-01 98.6% 63.2%
3399727 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.57 48.0 3.13e-01 97.3% 49.2%
4332836 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 48.0 3.04e-01 97.3% 29.0%
5081796 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.57 39.0 3.04e-01 72.6% 30.6%
3821429 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.57 50.0 3.88e-01 97.3% 75.6%
4113728 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.57 48.0 3.46e-01 95.9% 52.9%
3571692 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.57 49.0 3.15e-01 100.0% 43.1%
3596085 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.56 43.0 4.25e-01 86.3% 90.0%
4256926 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.56 48.0 3.60e-01 95.9% 50.8%
5081724 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.55 46.0 3.49e-01 98.6% 77.0%
3265841 216.1.1.20 a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.55 43.0 3.94e-01 87.7% 78.0%
4950432 210.1.1.5 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › DUF2121 0.55 47.0 3.52e-01 97.3% 50.0%
5057645 9.2.1.0 beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin 0.54 44.0 3.86e-01 93.2% 86.1%
3733356 298.1.1.25 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › ox_reductase_C 0.53 38.0 2.94e-01 75.3% 34.5%
1223841 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.53 44.0 3.90e-01 100.0% 68.3%
4025950 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.53 46.0 3.31e-01 97.3% 73.3%
3249052 10.1.1.19 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_leg-like 0.51 44.0 3.17e-01 98.6% 94.3%
D2 medium residues 90-123
PDB
Domain cluster: representative
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4a17U01 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.93 82.0 6.21e-01 100.0% 49.4%
1hr5A00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.90 77.0 6.92e-01 100.0% 79.2%
2e5vA03 1.20.58.100 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain 0.87 70.0 5.07e-01 94.1% 33.0%
2kw6A00 6.10.140.1300 Special › Helix non-globular › Helix Hairpins › 0.87 73.0 6.01e-01 100.0% 56.9%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.86 73.0 5.13e-01 100.0% 31.2%
1orjD00 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.86 72.0 4.92e-01 100.0% 28.0%
3fxdB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.86 73.0 6.18e-01 100.0% 67.2%
4gczA03 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.83 67.0 5.62e-01 100.0% 52.3%
1xjaB00 2.60.120.280 Mainly Beta › Sandwich › Jelly Rolls › Regulatory protein AraC 0.82 67.0 4.41e-01 100.0% 22.1%
4v19W00 3.90.470.10 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 0.82 62.0 3.97e-01 88.2% 18.1%
4od8D00 6.10.140.1880 Special › Helix non-globular › Helix Hairpins › 0.81 67.0 6.00e-01 100.0% 72.5%
7xrxB01 1.20.1420.20 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › M75 peptidase, HXXE motif 0.81 65.0 3.71e-01 100.0% 35.0%
8carA01 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.80 65.0 3.72e-01 100.0% 9.7%
3nynA03 1.10.167.10 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 0.79 65.0 5.05e-01 100.0% 100.0%
2dulA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.79 64.0 3.74e-01 97.1% 10.7%
2nr4A02 1.20.58.290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. 0.79 65.0 5.63e-01 100.0% 65.5%
3b2eF00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.77 66.0 5.48e-01 100.0% 91.9%
2ch7A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.77 63.0 3.69e-01 100.0% 83.2%
1m5iA00 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.76 60.0 4.35e-01 100.0% 29.5%
2a2cA03 1.20.1440.340 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.75 60.0 4.12e-01 100.0% 24.6%
3fxdC00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.74 62.0 5.57e-01 100.0% 68.0%
2wwwC01 1.20.5.170 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.73 60.0 5.35e-01 97.1% 71.2%
2ic6A00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.73 60.0 4.87e-01 100.0% 49.3%
1k3kA00 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.73 56.0 3.82e-01 100.0% 22.6%
4hkaA02 1.10.287.3810 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.72 57.0 5.21e-01 97.1% 68.6%
4xt1A00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.72 55.0 3.33e-01 100.0% 11.7%
1aepA00 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.70 54.0 3.66e-01 100.0% 73.2%
2lpeA01 6.10.140.1120 Special › Helix non-globular › Helix Hairpins › 0.69 53.0 4.34e-01 100.0% 51.3%
1pjrA04 1.10.486.10 Mainly Alpha › Orthogonal Bundle › PCRA; domain 4 › PCRA; domain 4 0.69 53.0 3.67e-01 97.1% 77.1%
3kztA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 55.0 3.86e-01 100.0% 27.3%
3favD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.68 55.0 4.38e-01 100.0% 53.8%
1nt2B02 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.68 51.0 4.44e-01 100.0% 56.7%
4dciA00 6.10.140.1110 Special › Helix non-globular › Helix Hairpins › 0.68 56.0 3.73e-01 100.0% 27.2%
2gomA00 1.10.10.1270 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Sbi, C3 binding domain IV 0.67 54.0 4.70e-01 100.0% 60.7%
1iurA01 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.63 50.0 4.27e-01 97.1% 82.5%
8jx6A02 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.61 46.0 3.63e-01 100.0% 33.0%
2kxpA01 3.30.1140.60 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit 0.60 46.0 3.43e-01 97.1% 34.6%
4didB01 1.20.58.450 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cell division control protein 42 homolog 0.60 50.0 3.47e-01 94.1% 28.1%
1dliA03 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.57 48.0 3.61e-01 100.0% 60.0%
4muoA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.55 46.0 3.67e-01 97.1% 54.2%
4hudA01 3.30.2000.40 Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser 0.54 45.0 2.83e-01 97.1% 80.0%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3927675 2004.1.1.600 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, ABC_tran_Xtn, AAA_21 0.98 91.0 4.85e-01 100.0% 6.0%
3233891 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.98 90.0 6.05e-01 100.0% 30.9%
3648207 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.98 89.0 4.76e-01 100.0% 5.5%
4129922 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.96 86.0 5.96e-01 100.0% 34.0%
3183420 604.6.1.4 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GGA_N-GAT 0.95 85.0 7.16e-01 100.0% 61.8%
3201365 604.6.1.4 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GGA_N-GAT 0.94 83.0 8.22e-01 97.1% 94.3%
3576527 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.94 84.0 5.31e-01 100.0% 22.7%
3182122 267.1.1.0 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.94 82.0 5.13e-01 100.0% 20.6%
4949599 601.4.1.0 alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains 0.93 82.0 5.28e-01 100.0% 23.4%
4115604 2003.1.5.82 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.93 81.0 4.63e-01 100.0% 11.0%
None 0.91 79.0 4.63e-01 100.0% 13.9%
3259417 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.90 78.0 4.77e-01 100.0% 17.0%
3422458 138.1.1.0 alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain 0.90 77.0 6.09e-01 100.0% 48.6%
3481310 604.6.1.0 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.90 78.0 5.68e-01 100.0% 38.9%
3170639 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.88 75.0 5.64e-01 100.0% 44.7%
3209611 601.33.1.0 alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain 0.88 74.0 6.09e-01 100.0% 52.3%
5057549 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.88 74.0 5.11e-01 100.0% 28.8%
5005588 5082.1.1.1 alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux 0.88 74.0 4.57e-01 100.0% 17.4%
3231728 5001.1.1.84 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srz 0.88 75.0 4.31e-01 100.0% 10.8%
3318812 192.8.1.248 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › KIF21A_4th 0.88 74.0 4.82e-01 100.0% 22.7%
None 0.87 76.0 4.63e-01 100.0% 17.0%
3594174 267.1.1.0 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.86 72.0 4.60e-01 100.0% 20.6%
3944950 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.86 71.0 5.88e-01 100.0% 52.3%
3634106 267.1.1.0 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.86 72.0 4.68e-01 100.0% 22.7%
3163896 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.86 73.0 4.44e-01 100.0% 16.2%
5013384 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.85 73.0 4.72e-01 100.0% 22.7%
4474737 3711.1.1.44 alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › Med11 0.85 71.0 5.31e-01 100.0% 37.8%
4949233 632.8.1.34 alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › HisKA 0.85 69.0 5.29e-01 100.0% 40.0%
1139567 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.85 69.0 5.09e-01 100.0% 35.1%
3337008 192.2.1.60 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › KIF21A_4th 0.84 70.0 4.65e-01 100.0% 24.3%
5061880 208.1.1.6 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep_2 0.84 68.0 4.20e-01 100.0% 16.5%
4025698 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.84 69.0 4.33e-01 100.0% 17.9%
4652719 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.84 68.0 5.07e-01 100.0% 35.8%
3635975 3681.1.1.0 a+b complex topology › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit 0.84 71.0 5.28e-01 100.0% 38.8%
4051951 605.2.1.0 alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 0.83 68.0 5.14e-01 100.0% 37.8%
3723379 267.1.1.0 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.83 68.0 4.37e-01 100.0% 20.0%
4949773 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.82 69.0 4.54e-01 100.0% 23.4%
5014336 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.82 68.0 4.50e-01 100.0% 23.4%
3954540 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.82 66.0 4.69e-01 100.0% 30.0%
3414542 614.1.1.1 alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain › L27 0.81 66.0 5.67e-01 100.0% 60.0%
3958913 150.8.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE 0.81 65.0 4.15e-01 100.0% 18.3%
3274663 180.1.1.5 alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › PAP2_3 0.80 65.0 3.93e-01 100.0% 13.3%
3595217 129.1.1.0 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like 0.78 64.0 4.40e-01 100.0% 26.2%
4216245 4082.1.1.1 alpha duplicates or obligate multimers › Hairy Orange domain › Hairy Orange domain › Hairy Orange domain › Hairy_orange 0.76 60.0 5.74e-01 100.0% 82.2%
3512377 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.70 56.0 3.72e-01 100.0% 22.6%
3684111 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.70 53.0 3.21e-01 100.0% 16.2%
3476821 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.68 51.0 3.11e-01 100.0% 11.7%