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MF377440.1__ASR77972.1__SEA_BELLA96_40__00039

Bact-Vir

MF377440.1__ASR77972.1__SEA_BELLA96_40__00039

Identity

Accession:
MF377440 ↗
Kingdom:
phage

Quality

74.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Anayavirus› Mycobacterium_phage_Bella96

TaxID: 2024005

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-270
PDB
Domain cluster: rep: IMGVR_UViG_3300000154_000022-3300000154-SI47jul10_150mDRAFT_100054520__D5-242
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF23859.1 best DpdA 558.2 4.50e-168 100.0% 95.2%
CATH (63)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4aajA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.75 54.0 6.24e-01 96.6% 98.5%
2bdqA00 3.20.20.380 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Copper homeostasis (CutC) domain 0.73 55.0 6.13e-01 89.8% 96.7%
1twdA00 3.20.20.380 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Copper homeostasis (CutC) domain 0.71 60.0 6.37e-01 97.7% 99.1%
2jbmA02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.70 39.0 5.12e-01 87.2% 97.3%
1f6kC00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.70 56.0 5.52e-01 100.0% 77.2%
3qfeB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.69 57.0 5.44e-01 100.0% 74.5%
2b7nA02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.68 38.0 4.94e-01 87.2% 97.3%
2yr1A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.68 57.0 5.86e-01 97.7% 91.1%
4ov4A01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.68 62.0 6.10e-01 95.9% 91.7%
6ktqA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.67 60.0 5.93e-01 95.9% 88.3%
6arhA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.67 57.0 5.51e-01 100.0% 79.3%
3nntA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.67 57.0 5.79e-01 97.7% 91.1%
2y2wC02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.67 60.0 5.32e-01 94.7% 98.9%
1y0eA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.67 51.0 5.59e-01 82.7% 94.1%
3qz6A00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.66 54.0 5.50e-01 84.2% 91.1%
1wx0A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.66 51.0 5.63e-01 99.6% 98.6%
1ctnA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.66 60.0 5.39e-01 95.9% 91.5%
1izjA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.66 57.0 4.82e-01 90.2% 86.8%
2vp8B00 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.65 52.0 5.53e-01 98.1% 92.4%
3wnkA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.65 60.0 5.46e-01 96.6% 98.0%
3l9wA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.65 38.0 4.75e-01 81.2% 93.3%
5ay7B00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.64 59.0 5.52e-01 97.7% 96.0%
1a5aA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.64 55.0 5.62e-01 95.1% 92.9%
3bleA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.64 61.0 5.76e-01 100.0% 97.7%
3bofA02 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.64 56.0 5.73e-01 98.5% 93.8%
7pd2B01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.64 58.0 5.19e-01 95.9% 79.8%
5dmmA00 3.20.20.330 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Homocysteine-binding-like domain 0.63 55.0 5.37e-01 90.6% 89.2%
3edeA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.63 56.0 4.83e-01 94.7% 99.0%
1gteB05 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.63 59.0 5.61e-01 98.1% 95.4%
1pyfA00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.63 56.0 5.33e-01 94.7% 94.2%
4e2oA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.63 57.0 5.11e-01 95.9% 86.6%
3bg3A02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.62 53.0 4.97e-01 100.0% 73.2%
3iacC01 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.62 57.0 5.01e-01 95.9% 89.6%
5z1aA03 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.62 53.0 5.07e-01 90.2% 77.3%
3fwzA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.62 31.0 4.17e-01 72.9% 88.6%
3fn9A03 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.62 52.0 5.01e-01 90.2% 77.5%
3lgdA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.62 54.0 4.39e-01 92.1% 77.6%
4o1eB00 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.61 57.0 5.76e-01 100.0% 97.8%
5t99A03 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.61 58.0 5.60e-01 100.0% 94.2%
2y8vA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.61 54.0 5.46e-01 96.2% 94.7%
1ur3M00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.61 57.0 5.49e-01 99.6% 95.6%
1aa1B02 3.20.20.110 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain 0.61 57.0 5.42e-01 100.0% 89.3%
4xk2B00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.60 56.0 5.38e-01 100.0% 99.0%
1gveB00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.60 57.0 5.43e-01 100.0% 95.0%
6ovqA00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.60 56.0 5.39e-01 100.0% 96.7%
2vccA03 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.60 55.0 5.16e-01 100.0% 100.0%
1gjwA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.59 52.0 4.05e-01 92.9% 83.6%
2wc7A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.59 50.0 4.41e-01 89.8% 77.9%
1pz1A00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.59 55.0 5.11e-01 100.0% 91.3%
1bqgA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.59 53.0 5.42e-01 99.2% 96.5%
3tr9B00 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.59 53.0 5.29e-01 97.4% 93.0%
1id1A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 32.0 4.07e-01 79.3% 89.5%
3c85A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 30.0 3.87e-01 93.2% 84.0%
3kzsA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.58 46.0 4.92e-01 83.8% 92.3%
1ea9C02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.58 53.0 4.94e-01 97.0% 96.6%
5visB00 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.56 52.0 5.23e-01 97.7% 97.8%
1e8cB03 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.56 31.0 4.13e-01 77.4% 100.0%
2ddmB00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.54 39.0 3.93e-01 81.6% 71.6%
2h6eA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 30.0 3.86e-01 78.9% 98.6%
1lw7A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.52 29.0 3.51e-01 72.9% 81.1%
6y1xB01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 44.0 4.64e-01 93.2% 97.6%
3m9wA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 32.0 3.90e-01 98.1% 98.8%
2vptA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.50 34.0 3.87e-01 94.7% 89.6%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4995886 2002.1.1.73 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.79 77.0 6.86e-01 100.0% 88.0%
4997013 2002.1.1.73 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.78 73.0 7.03e-01 97.7% 96.9%
3470343 2002.1.1.75 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › QRPTase_C 0.73 40.0 5.09e-01 84.2% 87.5%
4980563 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.73 66.0 6.43e-01 93.2% 95.8%
4385959 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.72 52.0 5.45e-01 94.4% 80.0%
3943155 2002.1.1.151 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_53 0.71 62.0 5.49e-01 92.9% 94.7%
None — 0.68 45.0 4.98e-01 95.5% 80.0%
1346827 2002.1.1.25 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like 0.68 62.0 6.08e-01 95.9% 91.1%
4991064 2002.1.1.25 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like 0.65 61.0 5.31e-01 100.0% 77.2%
4013719 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.64 59.0 5.31e-01 96.2% 73.2%
3967165 2002.1.1.25 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like 0.64 61.0 5.72e-01 100.0% 94.3%
5070285 2003.1.1.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.64 30.0 4.32e-01 72.9% 93.6%
4033655 2002.1.1.25 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like 0.64 60.0 5.97e-01 100.0% 97.5%
3587742 2002.1.1.4 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Alpha-amylase 0.64 56.0 4.86e-01 92.1% 96.7%
3388047 2002.1.1.122 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,BATS 0.63 57.0 5.13e-01 95.9% 78.6%
5007602 2003.1.1.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.63 30.0 4.30e-01 72.2% 94.4%
4938376 2003.1.1.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.63 32.0 4.28e-01 72.6% 91.1%
4174632 2003.1.1.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.63 40.0 4.42e-01 83.8% 77.6%
4009904 2003.1.1.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.63 31.0 4.01e-01 72.6% 79.4%
4930416 2003.1.1.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.63 31.0 4.35e-01 74.4% 95.4%
3593278 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.62 55.0 4.96e-01 92.1% 93.7%
3655847 2003.1.1.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.62 38.0 4.29e-01 79.3% 76.6%
5022468 2003.1.1.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.62 31.0 3.97e-01 72.6% 79.4%
3958564 2003.1.1.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.62 31.0 4.00e-01 71.8% 80.6%
3449125 2003.1.1.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.62 39.0 4.64e-01 83.1% 91.7%
1240675 2002.1.1.42 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase,A_deaminase_N 0.62 54.0 4.39e-01 92.1% 77.6%
None — 0.62 54.0 4.86e-01 91.7% 88.2%
3968532 2003.1.1.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.62 39.0 4.33e-01 83.8% 77.2%
4414950 2002.1.1.36 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pterin_bind 0.61 54.0 5.10e-01 97.4% 78.7%
4958916 2003.1.1.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.61 31.0 4.25e-01 72.9% 96.2%
3510441 2002.5.1.1 ↗ a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.61 47.0 4.81e-01 93.6% 81.2%
1489882 2002.1.1.36 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pterin_bind 0.61 57.0 5.74e-01 100.0% 98.5%
4935187 2003.1.1.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.61 30.0 4.09e-01 73.7% 88.6%
3281009 2004.1.1.73 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.61 34.0 4.04e-01 86.1% 77.3%
4190679 2003.1.1.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.61 38.0 4.24e-01 84.6% 76.3%
5058563 2003.1.1.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.61 32.0 4.03e-01 82.3% 83.9%
1200597 2003.1.1.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.60 31.0 4.20e-01 72.6% 93.4%
3165239 2003.1.1.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.60 39.0 4.31e-01 83.8% 80.8%
3950762 2002.1.1.96 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › S-methyl_trans 0.60 55.0 5.36e-01 97.0% 97.9%
3710563 2003.1.1.82 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Slo-like_RCK 0.59 36.0 4.39e-01 74.1% 91.8%
3599874 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.59 36.0 4.22e-01 74.1% 84.3%
3837738 2003.1.1.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.59 39.0 4.30e-01 83.8% 80.0%
1241364 2002.1.1.4 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Alpha-amylase 0.59 50.0 4.37e-01 89.8% 75.7%
4657887 2007.1.3.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding 0.57 32.0 3.84e-01 80.5% 78.9%
4141558 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.56 34.0 3.94e-01 91.7% 81.1%
5072313 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.55 43.0 4.34e-01 82.0% 89.6%
5024003 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.54 42.0 4.43e-01 92.5% 89.5%
5049899 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.54 42.0 4.58e-01 92.5% 100.0%
5068571 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.53 42.0 4.43e-01 88.3% 94.0%
4985579 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.51 46.0 4.23e-01 94.7% 88.2%
4029396 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 31.0 3.89e-01 86.5% 97.0%
5074464 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.51 44.0 4.50e-01 94.0% 100.0%
5051867 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.50 43.0 4.34e-01 91.4% 92.2%