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MF403007.1__AUZ94810.1__X__00038
Bact-VirMF403007.1__AUZ94810.1__X__00038
Identity
- Accession:
- MF403007 ↗
- Kingdom:
- phage
Quality
89.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pootjesviridae›
Rollinsvirus›
Agrobacterium_phage_Atu_ph04
TaxID: 2024263
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-70_83-188
Domain cluster:
rep: IMGVR_UViG_3300025156_000428-3300025156-Ga0209834_1000016635__D1-193
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4p5aC00 | 3.30.1360.170 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.78 | 74.0 | 6.71e-01 | 98.9% | 91.5% |
| 1kq4A00 | 3.30.1360.170 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.75 | 72.0 | 6.76e-01 | 98.9% | 89.2% |
| 3ah5B00 | 3.30.1360.170 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.74 | 68.0 | 6.39e-01 | 96.6% | 95.7% |
| 6vvoC03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.63 | 32.0 | 4.36e-01 | 72.2% | 94.5% |
| 2a8xA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.62 | 28.0 | 3.30e-01 | 97.2% | 57.4% |
| 2cfaA01 | 3.30.1360.170 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.62 | 46.0 | 5.12e-01 | 97.2% | 93.1% |
| 3kg8A01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.60 | 22.0 | 2.56e-01 | 96.0% | 43.8% |
| 2kfpA00 | 3.90.1150.30 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.53 | 26.0 | 3.06e-01 | 91.5% | 63.2% |
| 4acvA00 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.51 | 26.0 | 3.05e-01 | 80.1% | 68.9% |
| 3ulpD00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 22.0 | 2.65e-01 | 89.8% | 55.8% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4955043 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.89 | 70.0 | 7.63e-01 | 96.6% | 95.3% |
| 4102574 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.81 | 75.0 | 6.66e-01 | 97.2% | 95.0% |
| 4152367 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.79 | 75.0 | 6.05e-01 | 98.9% | 81.0% |
| 4992830 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.78 | 73.0 | 6.61e-01 | 96.6% | 82.2% |
| 5066566 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.78 | 74.0 | 6.77e-01 | 98.3% | 90.0% |
| 5077404 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.78 | 74.0 | 6.45e-01 | 97.7% | 84.5% |
| 4060791 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.78 | 74.0 | 6.37e-01 | 98.3% | 81.2% |
| 5001652 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.78 | 74.0 | 6.29e-01 | 97.7% | 95.4% |
| 4930760 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.78 | 73.0 | 6.27e-01 | 97.7% | 94.2% |
| 4943595 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.78 | 74.0 | 6.71e-01 | 98.9% | 86.7% |
| 4133204 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.78 | 73.0 | 6.48e-01 | 98.3% | 82.9% |
| 4933143 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.78 | 72.0 | 6.85e-01 | 97.2% | 86.7% |
| 1716752 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.78 | 74.0 | 6.68e-01 | 98.9% | 91.6% |
| 4628182 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.77 | 73.0 | 6.34e-01 | 98.9% | 82.0% |
| 134624 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.77 | 74.0 | 6.43e-01 | 98.9% | 89.8% |
| 4246528 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.77 | 73.0 | 6.40e-01 | 98.3% | 86.5% |
| 5046119 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.77 | 73.0 | 6.87e-01 | 98.9% | 94.7% |
| 4941740 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.77 | 72.0 | 5.05e-01 | 97.2% | 41.2% |
| 4988219 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.77 | 71.0 | 6.15e-01 | 95.5% | 91.2% |
| 1007250 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.77 | 71.0 | 6.75e-01 | 96.6% | 95.5% |
| 4982008 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.76 | 72.0 | 6.89e-01 | 98.9% | 91.5% |
| 4933142 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.74 | 70.0 | 6.27e-01 | 98.3% | 95.2% |
| 4300356 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.74 | 69.0 | 6.54e-01 | 96.6% | 97.0% |
| 5054516 | 842.1.1.0 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 | 0.74 | 67.0 | 6.64e-01 | 94.9% | 96.8% |
| 143031 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.74 | 68.0 | 6.41e-01 | 96.6% | 95.2% |
| 4134497 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.74 | 70.0 | 6.24e-01 | 97.7% | 80.4% |
| 5024487 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.72 | 67.0 | 6.25e-01 | 97.7% | 93.8% |
| 5029299 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.72 | 66.0 | 6.15e-01 | 96.0% | 91.4% |
| 5069296 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.71 | 67.0 | 5.77e-01 | 97.7% | 74.5% |
| 4345249 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.71 | 66.0 | 6.02e-01 | 97.7% | 86.7% |
| 4292511 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.71 | 66.0 | 4.67e-01 | 98.3% | 36.3% |
| 4926808 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.70 | 66.0 | 6.05e-01 | 98.3% | 90.5% |
| 5054515 | 842.1.1.0 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 | 0.70 | 65.0 | 6.09e-01 | 98.3% | 93.3% |
| 4127225 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.58 | 34.0 | 4.15e-01 | 88.6% | 88.7% |
| 3300663 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.58 | 24.0 | 3.60e-01 | 78.4% | 92.9% |
| 4019197 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.56 | 29.0 | 3.16e-01 | 98.9% | 60.0% |
| 3251895 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 28.0 | 3.64e-01 | 95.5% | 92.6% |
| 3251738 | 11.1.5.62 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM49 | 0.53 | 30.0 | 3.80e-01 | 88.6% | 96.0% |
| 4938590 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 28.0 | 3.69e-01 | 98.9% | 100.0% |
D2
medium
residues 189-296
Domain cluster:
rep: MG018928.1__ATW58097.1__CNR35_00001__00001__D3-77_89-109