←Back to structures
MF403008.1__ASV44765.1__X__00696
Bact-VirMF403008.1__ASV44765.1__X__00696
Identity
- Accession:
- MF403008 ↗
- Kingdom:
- phage
Quality
75.7
mean pLDDT
Taxonomy
TaxID: 2024264
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-47
Domain cluster:
representative
CATH (68)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.71 | 57.0 | 5.25e-01 | 100.0% | 82.5% |
| 1v5uA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.71 | 58.0 | 4.32e-01 | 100.0% | 41.0% |
| 6ui4A01 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.70 | 59.0 | 4.67e-01 | 100.0% | 81.8% |
| 3k6qA02 | 3.30.160.620 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.69 | 58.0 | 4.62e-01 | 100.0% | 44.9% |
| 1qviA01 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.69 | 58.0 | 4.26e-01 | 100.0% | 62.6% |
| 3gvpA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.68 | 45.0 | 3.03e-01 | 72.5% | 17.0% |
| 2codA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.67 | 54.0 | 4.16e-01 | 100.0% | 38.5% |
| 5towB02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.66 | 43.0 | 2.93e-01 | 72.5% | 16.9% |
| 4hhvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.66 | 57.0 | 4.24e-01 | 100.0% | 38.8% |
| 3cxbB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.66 | 55.0 | 4.20e-01 | 100.0% | 40.8% |
| 1faoA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.65 | 55.0 | 4.22e-01 | 100.0% | 41.0% |
| 1onfA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.64 | 47.0 | 3.44e-01 | 87.5% | 27.1% |
| 2dhkA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 53.0 | 4.11e-01 | 100.0% | 41.0% |
| 3mpxA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 54.0 | 4.17e-01 | 100.0% | 42.3% |
| 6ofsA03 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.63 | 52.0 | 3.35e-01 | 100.0% | 46.5% |
| 2jveA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.63 | 48.0 | 4.11e-01 | 87.5% | 74.6% |
| 4gzuB03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 51.0 | 4.08e-01 | 100.0% | 44.0% |
| 4k17B01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 50.0 | 3.79e-01 | 100.0% | 34.2% |
| 2d9xA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 51.0 | 3.87e-01 | 100.0% | 36.4% |
| 4nswA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 53.0 | 3.98e-01 | 100.0% | 37.6% |
| 3au4A04 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 45.0 | 3.51e-01 | 80.0% | 37.6% |
| 3d6wB02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.63 | 46.0 | 4.69e-01 | 82.5% | 89.7% |
| 3fm8D03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 51.0 | 3.91e-01 | 100.0% | 43.5% |
| 1zc3B00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 54.0 | 4.01e-01 | 100.0% | 38.5% |
| 3hr8A02 | 3.30.250.10 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › RecA protein, C-terminal domain | 0.62 | 48.0 | 4.17e-01 | 97.5% | 61.3% |
| 4tyzA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 49.0 | 3.80e-01 | 100.0% | 41.3% |
| 1w1hD00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 49.0 | 3.45e-01 | 100.0% | 27.0% |
| 1s3aA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.61 | 49.0 | 4.07e-01 | 100.0% | 92.9% |
| 1mkeA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 50.0 | 3.43e-01 | 100.0% | 25.7% |
| 1upqA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 49.0 | 3.81e-01 | 100.0% | 42.1% |
| 1dbhA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 50.0 | 3.66e-01 | 100.0% | 34.4% |
| 1nr4C00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 45.0 | 3.98e-01 | 87.5% | 60.6% |
| 2da0A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 46.0 | 3.50e-01 | 100.0% | 33.3% |
| 1eqtA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 44.0 | 3.87e-01 | 87.5% | 61.2% |
| 1x31C02 | 3.30.70.1520 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Heterotetrameric sarcosine oxidase | 0.59 | 41.0 | 3.49e-01 | 80.0% | 90.0% |
| 1vw4F02 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.58 | 46.0 | 3.73e-01 | 100.0% | 67.4% |
| 3dtdD00 | 2.60.40.1880 | Mainly Beta › Sandwich › Immunoglobulin-like › Invasion associated locus B (IalB) protein | 0.58 | 43.0 | 2.95e-01 | 80.0% | 95.9% |
| 1icwB00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 43.0 | 3.81e-01 | 87.5% | 65.2% |
| 7kfuC02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.58 | 45.0 | 2.87e-01 | 92.5% | 26.6% |
| 4cbvA02 | 2.40.50.1020 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain | 0.58 | 43.0 | 3.24e-01 | 87.5% | 33.1% |
| 1f44A01 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.58 | 47.0 | 3.12e-01 | 100.0% | 36.6% |
| 4geqB00 | 3.30.160.430 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 45.0 | 4.15e-01 | 97.5% | 77.6% |
| 2vszB02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 44.0 | 3.36e-01 | 97.5% | 50.4% |
| 3wisA00 | 3.40.50.1950 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like | 0.57 | 48.0 | 3.22e-01 | 100.0% | 95.0% |
| 6az1E02 | 2.40.50.740 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain | 0.57 | 47.0 | 4.42e-01 | 100.0% | 90.2% |
| 3udcA02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 40.0 | 3.86e-01 | 87.5% | 64.0% |
| 2uuvB01 | 3.40.462.40 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidase, cap domain/gating helix | 0.56 | 46.0 | 2.90e-01 | 97.5% | 66.3% |
| 4hcsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 41.0 | 3.66e-01 | 87.5% | 61.2% |
| 1f9qD00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 41.0 | 3.67e-01 | 87.5% | 63.6% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.55 | 38.0 | 3.72e-01 | 87.5% | 64.6% |
| 1wmhA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.55 | 48.0 | 3.79e-01 | 100.0% | 65.1% |
| 3pnnA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.54 | 46.0 | 2.80e-01 | 100.0% | 45.8% |
| 5ajiB02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 39.0 | 3.77e-01 | 87.5% | 68.0% |
| 1v57A03 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 39.0 | 2.83e-01 | 87.5% | 91.7% |
| 3kz5E00 | 6.10.140.1550 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 39.0 | 3.67e-01 | 77.5% | 72.9% |
| 1yr1A00 | 3.40.50.10960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 44.0 | 3.32e-01 | 100.0% | 46.2% |
| 4gj1A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 39.0 | 2.57e-01 | 87.5% | 92.6% |
| 1oqkA00 | 2.30.30.210 | Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 | 0.53 | 37.0 | 3.19e-01 | 80.0% | 65.4% |
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.53 | 37.0 | 3.32e-01 | 80.0% | 71.2% |
| 3havA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 43.0 | 3.32e-01 | 92.5% | 58.4% |
| 2lqoA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 39.0 | 3.31e-01 | 100.0% | 93.2% |
| 5xbfA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 41.0 | 3.40e-01 | 97.5% | 46.6% |
| 7w09A01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.51 | 42.0 | 2.68e-01 | 100.0% | 51.8% |
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.51 | 44.0 | 3.66e-01 | 100.0% | 94.4% |
| 2rghA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 43.0 | 2.71e-01 | 100.0% | 24.1% |
| 2ct4A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 35.0 | 3.14e-01 | 80.0% | 45.7% |
| 4k7zA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 42.0 | 2.74e-01 | 100.0% | 91.5% |
| 3o83A00 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.50 | 41.0 | 2.39e-01 | 95.0% | 44.6% |
ECOD (73)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3572708 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.70 | 57.0 | 4.12e-01 | 100.0% | 32.2% |
| 3247329 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.70 | 58.0 | 4.22e-01 | 100.0% | 34.5% |
| 3621726 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.69 | 58.0 | 4.14e-01 | 100.0% | 31.2% |
| 3261009 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.69 | 58.0 | 4.43e-01 | 100.0% | 43.0% |
| 3887127 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.68 | 56.0 | 4.00e-01 | 100.0% | 30.8% |
| 3264236 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.68 | 54.0 | 4.12e-01 | 100.0% | 37.0% |
| 4615793 | 101.1.2.92 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_11 | 0.68 | 45.0 | 3.50e-01 | 100.0% | 31.1% |
| 3634755 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.68 | 58.0 | 4.13e-01 | 100.0% | 34.4% |
| 3890749 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.67 | 55.0 | 4.26e-01 | 100.0% | 41.1% |
| 3264278 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.67 | 57.0 | 4.05e-01 | 100.0% | 31.5% |
| 3906768 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.67 | 56.0 | 4.02e-01 | 100.0% | 33.6% |
| 3260650 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.67 | 57.0 | 4.20e-01 | 100.0% | 37.3% |
| 3515993 | 220.1.1.13 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 | 0.67 | 53.0 | 3.81e-01 | 100.0% | 30.0% |
| 3270411 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.67 | 56.0 | 4.13e-01 | 100.0% | 35.7% |
| 3870917 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.66 | 55.0 | 3.74e-01 | 100.0% | 25.5% |
| 3861121 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.66 | 57.0 | 4.15e-01 | 100.0% | 36.5% |
| 3476418 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.66 | 54.0 | 3.83e-01 | 100.0% | 28.9% |
| 3934850 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.66 | 45.0 | 3.27e-01 | 70.0% | 26.7% |
| 3388895 | 220.1.1.170 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_alsin | 0.66 | 51.0 | 3.83e-01 | 100.0% | 32.7% |
| 3262550 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.66 | 55.0 | 3.97e-01 | 100.0% | 32.5% |
| 4100107 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.66 | 54.0 | 4.08e-01 | 100.0% | 38.2% |
| 3680657 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.65 | 55.0 | 3.16e-01 | 100.0% | 10.4% |
| 3992625 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 54.0 | 4.05e-01 | 100.0% | 37.1% |
| 3503857 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.65 | 55.0 | 4.08e-01 | 100.0% | 36.4% |
| 3912099 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.65 | 53.0 | 4.00e-01 | 100.0% | 36.2% |
| 3966925 | 304.107.1.2 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › SoxG | 0.65 | 50.0 | 3.39e-01 | 100.0% | 84.1% |
| 3859895 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.65 | 53.0 | 3.16e-01 | 100.0% | 11.2% |
| 3807010 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.65 | 54.0 | 3.80e-01 | 100.0% | 30.0% |
| 3797608 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 49.0 | 3.71e-01 | 90.0% | 38.2% |
| 3545477 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.65 | 56.0 | 3.90e-01 | 100.0% | 29.3% |
| 3991560 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.65 | 54.0 | 4.18e-01 | 100.0% | 41.1% |
| 3562938 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.65 | 55.0 | 3.95e-01 | 100.0% | 32.8% |
| 3533574 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.65 | 54.0 | 3.75e-01 | 100.0% | 29.0% |
| 3939128 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.64 | 53.0 | 3.91e-01 | 100.0% | 34.5% |
| 4940177 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 53.0 | 4.55e-01 | 100.0% | 77.1% |
| 3537696 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.64 | 55.0 | 3.78e-01 | 100.0% | 27.3% |
| 3778852 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.64 | 56.0 | 3.86e-01 | 100.0% | 29.3% |
| 3896415 | 220.1.1.7 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS | 0.64 | 45.0 | 3.50e-01 | 77.5% | 36.8% |
| 3475007 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.64 | 55.0 | 4.05e-01 | 100.0% | 36.4% |
| 3884716 | 220.1.1.2 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 | 0.63 | 52.0 | 3.64e-01 | 100.0% | 27.4% |
| 3899275 | 220.1.1.2 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 | 0.63 | 51.0 | 3.61e-01 | 100.0% | 27.4% |
| 169110 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.63 | 48.0 | 4.13e-01 | 87.5% | 75.7% |
| 4650117 | 502.1.1.1 ↗ | a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › RecA_C | 0.63 | 49.0 | 4.14e-01 | 97.5% | 56.2% |
| 4001872 | 220.1.1.123 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st | 0.63 | 49.0 | 3.28e-01 | 100.0% | 20.0% |
| 3633728 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.63 | 53.0 | 3.94e-01 | 100.0% | 36.5% |
| 3510664 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.63 | 54.0 | 3.78e-01 | 100.0% | 29.3% |
| 3401989 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.63 | 51.0 | 3.55e-01 | 100.0% | 27.1% |
| 3624498 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 51.0 | 3.72e-01 | 100.0% | 32.0% |
| 4236508 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.63 | 51.0 | 3.60e-01 | 100.0% | 31.4% |
| 4032952 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.63 | 48.0 | 3.14e-01 | 100.0% | 18.7% |
| 3923930 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.62 | 51.0 | 3.82e-01 | 100.0% | 34.5% |
| 4325664 | 330.7.1.0 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain | 0.62 | 47.0 | 4.40e-01 | 100.0% | 70.0% |
| 3258360 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 46.0 | 3.54e-01 | 87.5% | 39.0% |
| 5001380 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 49.0 | 4.13e-01 | 100.0% | 85.0% |
| 3406688 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.61 | 51.0 | 3.86e-01 | 100.0% | 38.2% |
| 3479095 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 44.0 | 3.34e-01 | 85.0% | 40.9% |
| 4202176 | 220.1.1.123 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st | 0.61 | 47.0 | 3.15e-01 | 100.0% | 19.5% |
| 3474420 | 220.1.1.123 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st | 0.61 | 51.0 | 3.51e-01 | 100.0% | 39.3% |
| 3874654 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.61 | 52.0 | 3.60e-01 | 100.0% | 27.3% |
| 3291448 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 46.0 | 3.79e-01 | 100.0% | 44.4% |
| 4385448 | 220.1.1.154 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_EXO84 | 0.58 | 48.0 | 3.13e-01 | 97.5% | 26.7% |
| 3068467 | 5077.1.1.1 ↗ | extended segments › Chlorophyll a-b binding protein › Chlorophyll a-b binding protein › Chlorophyll a-b binding protein › Chloroa_b-bind | 0.58 | 48.0 | 2.95e-01 | 97.5% | 21.4% |
| 3792816 | 220.1.1.33 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_8 | 0.57 | 45.0 | 3.42e-01 | 100.0% | 35.8% |
| 3493556 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 45.0 | 3.43e-01 | 97.5% | 47.3% |
| 3797728 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 41.0 | 3.59e-01 | 100.0% | 58.8% |
| 3418933 | 2004.1.1.414 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU, MMR_HSR1 | 0.55 | 45.0 | 2.96e-01 | 100.0% | 32.2% |
| 3576021 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.55 | 39.0 | 3.00e-01 | 87.5% | 30.8% |
| 3640935 | 3543.1.1.4 ↗ | alpha complex topology › Acid-activated urea channel › Acid-activated urea channel › Acid-activated urea channel › DUF716 | 0.55 | 47.0 | 2.91e-01 | 97.5% | 41.3% |
| 5027663 | 244.2.1.11 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › DUF2283 | 0.54 | 41.0 | 3.64e-01 | 87.5% | 96.9% |
| 3276546 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.54 | 47.0 | 2.76e-01 | 100.0% | 99.1% |
| 3256547 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 42.0 | 3.40e-01 | 100.0% | 49.0% |
| 3995389 | 220.1.1.2 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 | 0.54 | 42.0 | 3.05e-01 | 97.5% | 29.0% |
| 3640588 | 6043.2.1.0 ↗ | a+b two layers › yfeY-like › Teichoic acid transporter subunit TagH C-terminal domain › Teichoic acid transporter subunit TagH C-terminal domain | 0.51 | 41.0 | 3.17e-01 | 100.0% | 38.7% |
D2
high
residues 278-464
Domain cluster:
rep: JSantini_GMIN_scaffold_8_prodigal-single.1__X__X__00039__D10-217
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4divV01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.72 | 48.0 | 5.54e-01 | 100.0% | 92.0% |
| 2v8hA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 28.0 | 3.50e-01 | 82.9% | 70.7% |
| 1gyvA00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.59 | 29.0 | 3.55e-01 | 100.0% | 70.8% |
| 3l81A02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.57 | 30.0 | 3.82e-01 | 85.6% | 85.5% |
| 3b34A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.57 | 33.0 | 3.44e-01 | 89.3% | 59.4% |
| 3k8aB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 22.0 | 2.87e-01 | 93.0% | 61.2% |
| 2l25A00 | 3.30.2000.20 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.56 | 38.0 | 4.37e-01 | 92.0% | 92.9% |
| 6tmfM00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.55 | 28.0 | 3.62e-01 | 72.2% | 85.3% |
| 2xzmJ00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.55 | 27.0 | 3.54e-01 | 73.8% | 83.8% |
| 2ftrA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 23.0 | 3.06e-01 | 70.6% | 69.9% |
| 5v7qT00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.54 | 28.0 | 3.65e-01 | 95.2% | 91.8% |
| 3u6yA00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.53 | 26.0 | 3.43e-01 | 77.5% | 84.8% |
| 5xyiU00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.53 | 26.0 | 3.40e-01 | 72.2% | 84.5% |
| 3fcsA03 | 2.60.40.1510 | Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 | 0.53 | 31.0 | 3.61e-01 | 85.6% | 77.7% |
| 6phxA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.50 | 25.0 | 3.42e-01 | 74.9% | 92.6% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3980535 | 1.1.13.51 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_P2_GpU | 0.81 | 57.0 | 6.69e-01 | 100.0% | 98.5% |
| 5004559 | 1.1.13.75 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › CIS_tube | 0.79 | 56.0 | 6.56e-01 | 87.7% | 100.0% |
| 3580020 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.78 | 63.0 | 6.26e-01 | 98.9% | 80.5% |
| 3164699 | 1.1.13.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DNA_circ_N | 0.78 | 47.0 | 5.89e-01 | 88.8% | 97.4% |
| 3965192 | 1.1.13.67 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2460 | 0.76 | 47.0 | 5.91e-01 | 88.8% | 100.0% |
| 5062396 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.76 | 56.0 | 6.42e-01 | 84.0% | 100.0% |
| 4873215 | 1.1.13.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2001 | 0.75 | 49.0 | 5.66e-01 | 100.0% | 87.9% |
| 4957560 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.74 | 48.0 | 5.72e-01 | 99.5% | 94.6% |
| 4032562 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.73 | 49.0 | 5.80e-01 | 88.8% | 96.9% |
| 2674670 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.73 | 50.0 | 5.23e-01 | 100.0% | 75.0% |
| 3581358 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.72 | 52.0 | 5.67e-01 | 99.5% | 88.4% |
| 4033579 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.72 | 48.0 | 5.73e-01 | 91.4% | 100.0% |
| 1444177 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 47.0 | 5.48e-01 | 98.9% | 91.2% |
| 2832217 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.71 | 49.0 | 5.58e-01 | 99.5% | 91.5% |
| 4034209 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.70 | 49.0 | 5.72e-01 | 88.8% | 98.5% |
| 4954561 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.70 | 49.0 | 5.66e-01 | 100.0% | 98.5% |
| 184986 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.70 | 45.0 | 5.39e-01 | 98.9% | 96.8% |
| 2101663 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.70 | 51.0 | 5.45e-01 | 98.9% | 85.9% |
| 4888732 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.69 | 47.0 | 5.10e-01 | 100.0% | 81.4% |
| 4988100 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.68 | 44.0 | 5.26e-01 | 99.5% | 98.4% |
| 2101633 | 1.1.13.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube | 0.66 | 50.0 | 5.32e-01 | 96.3% | 87.4% |
| 3976188 | 1.1.13.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube | 0.66 | 51.0 | 5.39e-01 | 96.3% | 90.3% |
| 5071965 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.63 | 22.0 | 3.18e-01 | 88.8% | 65.3% |
| 4938164 | 11.1.1.138 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NPCBM_assoc | 0.61 | 30.0 | 3.80e-01 | 86.6% | 76.4% |
| 3245466 | 11.1.1.44 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha_adaptinC2 | 0.59 | 29.0 | 3.44e-01 | 87.2% | 66.9% |
| 4937629 | 11.1.1.138 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NPCBM_assoc | 0.58 | 28.0 | 3.29e-01 | 86.1% | 62.3% |
| 3633830 | 11.1.1.44 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha_adaptinC2 | 0.58 | 28.0 | 3.45e-01 | 87.2% | 70.0% |
| 3952678 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.56 | 28.0 | 3.99e-01 | 80.7% | 100.0% |
| 3821846 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 27.0 | 3.39e-01 | 81.8% | 75.5% |
| 4970221 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 26.0 | 3.32e-01 | 86.1% | 75.2% |
| 4943323 | 304.44.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 | 0.54 | 28.0 | 3.52e-01 | 73.8% | 83.7% |
| 5041672 | 304.44.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 | 0.53 | 27.0 | 3.43e-01 | 71.7% | 82.5% |
| 4584621 | 304.44.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 | 0.52 | 26.0 | 3.35e-01 | 70.6% | 83.0% |
| 3981520 | 872.3.1.4 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › DUF4156 | 0.52 | 27.0 | 3.70e-01 | 88.2% | 100.0% |
| 4187036 | 306.7.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain | 0.51 | 31.0 | 3.78e-01 | 78.1% | 99.1% |
| 3740450 | 328.1.1.3 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Rpp20 | 0.51 | 23.0 | 3.30e-01 | 75.9% | 90.0% |
| 4994692 | 304.44.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 | 0.50 | 26.0 | 3.23e-01 | 73.8% | 80.0% |
| 2755609 | 218.2.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Ribosomal protein L22 › Ribosomal protein L22 › Ribosomal_L22 | 0.50 | 35.0 | 3.74e-01 | 73.3% | 80.1% |
D3
medium
residues 51-182
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2iakA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.81 | 51.0 | 4.42e-01 | 70.5% | 43.2% |
| 3cazB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.78 | 58.0 | 4.85e-01 | 75.8% | 47.6% |
| 6iknD01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.78 | 58.0 | 4.53e-01 | 77.3% | 39.0% |
| 7aalA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.76 | 56.0 | 4.39e-01 | 75.8% | 45.5% |
| 4ke2A00 | 6.10.140.1860 | Special › Helix non-globular › Helix Hairpins › | 0.75 | 53.0 | 4.63e-01 | 72.7% | 62.8% |
| 3syvA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.74 | 54.0 | 4.39e-01 | 75.8% | 51.8% |
| 3nyjA00 | 1.20.120.770 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Amyloid precursor protein, E2 domain | 0.73 | 53.0 | 4.69e-01 | 87.9% | 53.6% |
| 3g67A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.73 | 51.0 | 4.28e-01 | 100.0% | 44.1% |
| 4wpeA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.68 | 55.0 | 4.28e-01 | 84.8% | 57.8% |
| 1wp1B01 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.67 | 58.0 | 4.17e-01 | 93.9% | 35.9% |
| 1yc9A01 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.66 | 55.0 | 4.12e-01 | 93.2% | 36.1% |
| 2ap3A00 | 1.20.120.570 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YkyA-like | 0.64 | 52.0 | 4.50e-01 | 84.8% | 92.7% |
| 2ch7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.55 | 51.0 | 3.84e-01 | 100.0% | 72.5% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.54 | 48.0 | 4.24e-01 | 93.2% | 82.0% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3213527 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.93 | 69.0 | 5.13e-01 | 75.8% | 36.1% |
| 3576467 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.90 | 67.0 | 4.90e-01 | 75.8% | 33.8% |
| 3908810 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.90 | 66.0 | 4.93e-01 | 75.8% | 34.9% |
| 3739242 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.89 | 61.0 | 5.61e-01 | 70.5% | 57.0% |
| 3908132 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.86 | 63.0 | 4.97e-01 | 75.8% | 43.3% |
| 3488631 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.86 | 64.0 | 4.88e-01 | 76.5% | 37.8% |
| 3435097 | 4177.1.1.11 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › DUF632 | 0.85 | 63.0 | 4.85e-01 | 75.8% | 38.5% |
| 3488978 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.85 | 64.0 | 4.80e-01 | 77.3% | 40.3% |
| 3519973 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.84 | 62.0 | 4.94e-01 | 75.8% | 42.0% |
| 4479045 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.84 | 60.0 | 4.95e-01 | 73.5% | 46.4% |
| 3740490 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.80 | 59.0 | 4.82e-01 | 75.8% | 50.4% |
| 3498560 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.80 | 72.0 | 5.58e-01 | 94.7% | 75.1% |
| 3366153 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.78 | 69.0 | 6.32e-01 | 94.7% | 72.9% |
| 3620978 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.77 | 67.0 | 4.88e-01 | 90.2% | 40.9% |
| 3232199 | 4177.1.1.10 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › GMIP-like_FCH | 0.77 | 57.0 | 4.39e-01 | 75.8% | 51.9% |
| 3235225 | 4177.1.1.5 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Vps5 | 0.77 | 56.0 | 4.71e-01 | 75.8% | 49.5% |
| 3268765 | 4177.1.1.8 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3 | 0.76 | 55.0 | 4.48e-01 | 75.0% | 42.1% |
| 3577907 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.74 | 54.0 | 4.31e-01 | 75.8% | 66.7% |
| 3477880 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.72 | 53.0 | 4.06e-01 | 75.8% | 58.3% |
| 3236352 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.69 | 50.0 | 4.47e-01 | 74.2% | 53.0% |
| 3170491 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.69 | 60.0 | 5.04e-01 | 93.2% | 63.6% |
| 4963648 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.68 | 57.0 | 3.79e-01 | 88.6% | 39.0% |
| 3497227 | 3343.1.1.0 ↗ | alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) | 0.65 | 49.0 | 3.15e-01 | 78.0% | 52.3% |
| 3389713 | 174.1.1.29 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › DUF4728 | 0.63 | 46.0 | 4.52e-01 | 99.2% | 70.0% |
| 3385727 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.61 | 53.0 | 4.20e-01 | 94.7% | 60.7% |
| 3225902 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.57 | 47.0 | 4.43e-01 | 96.2% | 72.5% |
| 3624755 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.52 | 46.0 | 4.15e-01 | 96.2% | 72.2% |