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MF403008.1__AUZ94815.1__X__00003
Bact-VirMF403008.1__AUZ94815.1__X__00003
Identity
- Accession:
- MF403008 ↗
- Kingdom:
- phage
Quality
97.0
mean pLDDT
Taxonomy
TaxID: 2024264
Cluster
View cluster (10 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 45-113
Domain cluster:
rep: OQ221545.1__WCF58069.1__PhiCrAssBcn10_1__00001__D1-78
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wojA00 | 3.90.1740.10 | Alpha Beta › Alpha-Beta Complex › 2',3'-cyclic nucleotide 3'-phosphodiesterase fold › 2',3'-cyclic nucleotide 3'-phosphodiesterase superfamily | 0.80 | 74.0 | 5.12e-01 | 100.0% | 54.1% |
| 2peeB02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.62 | 52.0 | 4.21e-01 | 92.8% | 71.8% |
| 5ncsA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.60 | 49.0 | 3.96e-01 | 92.8% | 68.3% |
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.59 | 38.0 | 3.53e-01 | 82.6% | 50.0% |
| 1pybA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 42.0 | 3.64e-01 | 100.0% | 50.5% |
| 5dnlA02 | 3.30.230.40 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › Imidazole glycerol phosphate dehydratase; domain 1 | 0.57 | 44.0 | 3.94e-01 | 84.1% | 84.2% |
| 1b63A02 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.57 | 42.0 | 3.65e-01 | 81.2% | 97.4% |
| 2shpB03 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.55 | 38.0 | 2.61e-01 | 73.9% | 21.9% |
| 2xzmE02 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.55 | 43.0 | 3.96e-01 | 87.0% | 87.4% |
| 4fxtA01 | 2.60.40.1120 | Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain | 0.54 | 33.0 | 3.13e-01 | 87.0% | 47.7% |
| 7essA01 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.53 | 38.0 | 3.20e-01 | 79.7% | 93.9% |
| 3nwsA01 | 2.40.50.800 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 46.0 | 3.69e-01 | 100.0% | 62.4% |
| 1dtdB00 | 3.30.1040.10 | Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › Carboxypeptidase inhibitor | 0.52 | 33.0 | 3.51e-01 | 95.7% | 73.8% |
| 6ptrB01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.52 | 39.0 | 3.34e-01 | 91.3% | 49.6% |
| 1vqzA02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.52 | 37.0 | 3.48e-01 | 78.3% | 96.6% |
| 1vpkA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.51 | 40.0 | 3.30e-01 | 91.3% | 47.5% |
| 5wceA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.51 | 35.0 | 2.96e-01 | 88.4% | 41.2% |
| 1s14B00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.51 | 33.0 | 2.49e-01 | 88.4% | 25.3% |
| 2o5nA02 | 3.30.500.30 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.50 | 39.0 | 3.07e-01 | 87.0% | 93.6% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3835887 | 264.1.1.10 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › tRNA_lig_CPD | 0.81 | 76.0 | 5.73e-01 | 100.0% | 52.3% |
| 3673377 | 264.1.1.0 ↗ | beta barrels › LigT-like › LigT-related › LigT-related | 0.80 | 74.0 | 5.64e-01 | 98.6% | 53.1% |
| 3709497 | 264.1.1.10 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › tRNA_lig_CPD | 0.80 | 74.0 | 5.68e-01 | 100.0% | 52.4% |
| 3264230 | 264.1.1.0 ↗ | beta barrels › LigT-like › LigT-related › LigT-related | 0.79 | 74.0 | 5.81e-01 | 100.0% | 63.2% |
| 3203190 | 264.1.1.0 ↗ | beta barrels › LigT-like › LigT-related › LigT-related | 0.78 | 71.0 | 5.49e-01 | 100.0% | 49.7% |
| 3611297 | 264.1.1.0 ↗ | beta barrels › LigT-like › LigT-related › LigT-related | 0.74 | 68.0 | 5.25e-01 | 100.0% | 53.5% |
| 3909682 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.62 | 47.0 | 3.96e-01 | 79.7% | 76.4% |
| 3246905 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.61 | 49.0 | 3.85e-01 | 89.9% | 81.3% |
| 3894257 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 45.0 | 3.57e-01 | 79.7% | 62.2% |
| 2847556 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.59 | 45.0 | 3.65e-01 | 79.7% | 65.6% |
| 3748151 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.59 | 43.0 | 3.33e-01 | 76.8% | 54.0% |
| 3910119 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.58 | 47.0 | 3.57e-01 | 91.3% | 81.2% |
| 143428 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.57 | 41.0 | 3.39e-01 | 91.3% | 43.3% |
| 5063036 | 7515.1.1.6 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Phosphodiest | 0.57 | 39.0 | 2.39e-01 | 75.4% | 10.4% |
| 4024730 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.55 | 41.0 | 3.83e-01 | 88.4% | 64.7% |
| 4517015 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.53 | 39.0 | 3.25e-01 | 91.3% | 44.4% |
| 4573327 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.52 | 39.0 | 3.07e-01 | 82.6% | 88.7% |