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MF403008.1__AUZ94855.1__X__00043
Bact-VirMF403008.1__AUZ94855.1__X__00043
Identity
- Accession:
- MF403008 ↗
- Kingdom:
- phage
Quality
79.0
mean pLDDT
Taxonomy
TaxID: 2024264
Cluster
View cluster (15 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-92
Domain cluster:
rep: S2_009_000_R2_scaffold_4_prodigal-single.1__X__X__00213__D21-98
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cuqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 65.0 | 6.84e-01 | 90.0% | 98.8% |
| 1fokA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 55.0 | 5.62e-01 | 90.0% | 75.9% |
| 3to7A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 52.0 | 5.45e-01 | 95.6% | 79.0% |
| 3u9gA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 44.0 | 5.13e-01 | 78.9% | 87.1% |
| 2gj2A00 | 3.30.70.2070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › VP9 protein domain | 0.72 | 38.0 | 4.02e-01 | 76.7% | 58.2% |
| 4yiiA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 53.0 | 5.90e-01 | 87.8% | 98.6% |
| 5nl9A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 50.0 | 5.16e-01 | 87.8% | 78.6% |
| 2ly1A01 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.68 | 49.0 | 5.19e-01 | 86.7% | 87.3% |
| 1fnnB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 52.0 | 5.04e-01 | 87.8% | 72.8% |
| 6qpqB00 | 1.10.10.580 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E | 0.68 | 52.0 | 5.41e-01 | 82.2% | 90.1% |
| 2zkzC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 44.0 | 4.47e-01 | 83.3% | 67.8% |
| 3cuqB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 53.0 | 5.59e-01 | 91.1% | 96.2% |
| 6uvuA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 46.0 | 4.41e-01 | 86.7% | 60.6% |
| 2co5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 49.0 | 4.89e-01 | 87.8% | 75.0% |
| 1u5tB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 55.0 | 5.69e-01 | 91.1% | 98.8% |
| 6lbsB01 | 3.30.1370.230 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain | 0.66 | 50.0 | 5.32e-01 | 81.1% | 94.9% |
| 1vtnC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 51.0 | 4.90e-01 | 85.6% | 74.5% |
| 5lslA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.64 | 33.0 | 3.47e-01 | 86.7% | 54.4% |
| 2vxzA02 | 1.10.10.1490 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.64 | 52.0 | 5.32e-01 | 90.0% | 95.4% |
| 5hvqC01 | 3.90.1150.220 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.64 | 49.0 | 5.13e-01 | 86.7% | 93.8% |
| 2fmlB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 42.0 | 4.74e-01 | 82.2% | 96.9% |
| 2hqyA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.62 | 41.0 | 3.68e-01 | 84.4% | 46.9% |
| 2kloA00 | 1.10.10.1420 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA replication factor Cdt1, C-terminal WH domain | 0.62 | 51.0 | 4.52e-01 | 97.8% | 60.9% |
| 1wj5A01 | 1.10.10.980 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › CST, Suppressor of Cdc13 homolog, complex subunit STN1, N-terminal domain | 0.61 | 49.0 | 4.86e-01 | 88.9% | 98.0% |
| 4kvxA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.60 | 45.0 | 3.75e-01 | 88.9% | 46.7% |
| 1x4gA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 30.0 | 2.85e-01 | 72.2% | 39.4% |
| 4ig1A00 | 3.10.520.10 | Alpha Beta › Roll › T-fold › ApbE-like domains | 0.55 | 49.0 | 3.34e-01 | 100.0% | 36.3% |
| 1xmxA03 | 1.10.10.680 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Hypothetical protein VC1899 (Restriction endonuclease-like) | 0.55 | 38.0 | 3.91e-01 | 87.8% | 75.3% |
| 1cc8A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 31.0 | 3.39e-01 | 77.8% | 69.4% |
| 3fncB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 38.0 | 3.16e-01 | 87.8% | 42.2% |
| 2fupA00 | 1.20.58.300 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › FlgN-like | 0.52 | 47.0 | 4.15e-01 | 97.8% | 94.5% |
| 3ndiA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 42.0 | 3.25e-01 | 92.2% | 100.0% |
| 4rv9A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 42.0 | 3.25e-01 | 92.2% | 100.0% |
| 2yx0A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.50 | 41.0 | 2.89e-01 | 93.3% | 39.5% |
ECOD (57)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3270164 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 53.0 | 6.09e-01 | 86.7% | 96.9% |
| 3741254 | 101.1.2.289 ↗ | alpha arrays › HTH › HTH › winged helix domain › Stb3 | 0.78 | 66.0 | 6.79e-01 | 98.9% | 95.3% |
| 3817137 | 101.1.2.57 ↗ | alpha arrays › HTH › HTH › winged helix domain › EAP30 | 0.78 | 70.0 | 6.72e-01 | 98.9% | 86.0% |
| 3666825 | 101.1.4.12 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › MSC | 0.77 | 71.0 | 6.63e-01 | 100.0% | 87.3% |
| 4091599 | 4156.1.1.6 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc | 0.76 | 55.0 | 4.03e-01 | 86.7% | 29.6% |
| 3784677 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.76 | 70.0 | 5.17e-01 | 100.0% | 44.1% |
| 3481408 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 70.0 | 5.35e-01 | 100.0% | 65.6% |
| 3224625 | 101.1.2.374 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD | 0.76 | 59.0 | 6.44e-01 | 98.9% | 98.7% |
| 5032533 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 57.0 | 5.89e-01 | 88.9% | 83.5% |
| 3700540 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 62.0 | 6.57e-01 | 88.9% | 100.0% |
| 4996633 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 59.0 | 5.93e-01 | 90.0% | 83.3% |
| 3516107 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.75 | 68.0 | 6.27e-01 | 100.0% | 84.3% |
| 4928979 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 57.0 | 5.31e-01 | 83.3% | 66.1% |
| 3887336 | 101.1.4.12 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › MSC | 0.74 | 62.0 | 4.55e-01 | 88.9% | 38.2% |
| 4012162 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 68.0 | 5.44e-01 | 100.0% | 81.8% |
| 4982868 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 52.0 | 5.39e-01 | 88.9% | 77.6% |
| 3990493 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 65.0 | 6.56e-01 | 98.9% | 96.7% |
| 3464534 | 101.1.2.641 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1, DUF7647 | 0.74 | 59.0 | 3.57e-01 | 85.6% | 14.8% |
| 5002286 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 53.0 | 4.58e-01 | 88.9% | 49.3% |
| 3792911 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.73 | 66.0 | 6.06e-01 | 100.0% | 81.7% |
| 4946048 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 55.0 | 5.82e-01 | 87.8% | 90.0% |
| 3843442 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.72 | 65.0 | 5.85e-01 | 100.0% | 77.6% |
| 3319155 | 101.1.4.12 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › MSC | 0.72 | 66.0 | 4.59e-01 | 100.0% | 34.3% |
| 5000306 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 55.0 | 5.67e-01 | 88.9% | 85.9% |
| 3905735 | 101.1.2.94 ↗ | alpha arrays › HTH › HTH › winged helix domain › ANAPC2 | 0.72 | 60.0 | 6.22e-01 | 100.0% | 95.3% |
| 4994527 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 52.0 | 5.49e-01 | 88.9% | 86.3% |
| 3334401 | 101.1.2.566 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C | 0.71 | 63.0 | 4.49e-01 | 100.0% | 33.1% |
| 3657248 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.71 | 57.0 | 5.48e-01 | 86.7% | 79.0% |
| 5016171 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 53.0 | 4.34e-01 | 85.6% | 44.4% |
| 4943397 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 52.0 | 5.74e-01 | 83.3% | 98.6% |
| 4028933 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 50.0 | 5.53e-01 | 88.9% | 98.6% |
| 3467284 | 101.1.2.154 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1_C | 0.69 | 61.0 | 5.83e-01 | 100.0% | 84.3% |
| 4991692 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 45.0 | 5.02e-01 | 80.0% | 87.0% |
| 3183990 | 101.1.2.122 ↗ | alpha arrays › HTH › HTH › winged helix domain › CSN8_PSD8_EIF3K | 0.69 | 46.0 | 4.36e-01 | 93.3% | 58.1% |
| 5048462 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 56.0 | 5.08e-01 | 94.4% | 64.8% |
| 3251230 | 101.1.2.69 ↗ | alpha arrays › HTH › HTH › winged helix domain › La | 0.68 | 57.0 | 5.80e-01 | 91.1% | 96.7% |
| 4219514 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.68 | 51.0 | 5.35e-01 | 96.7% | 90.0% |
| 4030732 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 56.0 | 5.77e-01 | 90.0% | 98.8% |
| 3610608 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 54.0 | 5.44e-01 | 86.7% | 98.9% |
| 3694234 | 101.1.2.57 ↗ | alpha arrays › HTH › HTH › winged helix domain › EAP30 | 0.67 | 59.0 | 4.84e-01 | 100.0% | 72.4% |
| 3600603 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 50.0 | 5.18e-01 | 80.0% | 83.5% |
| 3204619 | 101.1.2.57 ↗ | alpha arrays › HTH › HTH › winged helix domain › EAP30 | 0.66 | 56.0 | 4.82e-01 | 96.7% | 76.7% |
| 3542800 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.65 | 57.0 | 4.17e-01 | 100.0% | 36.5% |
| 4877996 | 101.1.2.15 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR | 0.64 | 49.0 | 4.90e-01 | 85.6% | 78.7% |
| 3717176 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 56.0 | 5.14e-01 | 100.0% | 88.3% |
| 4936865 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 54.0 | 4.90e-01 | 94.4% | 76.0% |
| 3528416 | 101.1.2.375 ↗ | alpha arrays › HTH › HTH › winged helix domain › MOV-10_N | 0.63 | 47.0 | 4.97e-01 | 87.8% | 94.7% |
| 3226550 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.63 | 37.0 | 3.67e-01 | 80.0% | 53.7% |
| 3688689 | 101.1.2.24 ↗ | alpha arrays › HTH › HTH › winged helix domain › MAGE | 0.62 | 50.0 | 4.51e-01 | 94.4% | 63.1% |
| 5079275 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.61 | 45.0 | 2.93e-01 | 80.0% | 94.4% |
| 5021696 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.57 | 46.0 | 3.14e-01 | 88.9% | 83.3% |
| 3517817 | 304.9.1.20 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_8 | 0.56 | 30.0 | 2.99e-01 | 70.0% | 46.3% |
| 5011249 | 2003.1.5.69 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GCD14 | 0.56 | 35.0 | 2.89e-01 | 80.0% | 33.3% |
| 5018369 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.54 | 32.0 | 3.22e-01 | 93.3% | 56.7% |
| 4951800 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.53 | 31.0 | 3.14e-01 | 91.1% | 53.7% |
| 4166108 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.52 | 30.0 | 3.05e-01 | 91.1% | 54.4% |
| 3730926 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.51 | 28.0 | 3.00e-01 | 72.2% | 57.5% |