MF403008.1AUZ94866.1X__00054

Bact-Vir

MF403008.1__AUZ94866.1__X__00054

Identity

83.9 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Polybotosvirus› Agrobacterium_phage_Atu_ph07

TaxID: 2024264

Singleton — not in a non-trivial cluster

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-122_212-255

PDB

Domain cluster: rep: MF360958.1__ASV44233.1__PBI_SCTP2_218__00218__D7-96_112-152_267-297

D2 high residues 141-204

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5vyoD00	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.62	46.0	3.38e-01	82.8%	36.7%
3gl5A01	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.59	42.0	3.05e-01	78.1%	55.0%
2remB00	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.59	42.0	3.15e-01	78.1%	39.0%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3962358	2485.1.1.58 ↗	a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Rv2466c-like	0.62	44.0	3.22e-01	75.0%	35.8%
3607671	3716.1.1.0 ↗	alpha arrays › DUF3349 › DUF3349 › DUF3349	0.51	36.0	3.23e-01	79.7%	76.2%
3633705	109.4.1.2507 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_EZ, Importin_rep_4, Importin_rep_5, Importin_rep_6, TPR_IMB1	0.51	36.0	2.10e-01	79.7%	17.9%

D3 medium residues 263-306_332-372_459-490

PDB

Domain cluster: rep: MG752970.1__AVH85333.1__RsoM2USA_405__00405__D14-75_98-125_256-291

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1kqrA00	2.60.120.200	Mainly Beta › Sandwich › Jelly Rolls ›	0.54	38.0	3.42e-01	72.6%	96.2%
5upiA01	2.70.98.30	Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4	0.52	39.0	3.35e-01	78.6%	81.9%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4296568	237.1.1.4 ↗	a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA	0.71	51.0	5.61e-01	77.8%	91.6%

D4 medium residues 307-331_373-458

PDB

Domain cluster: representative

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
6e1kA01	1.10.287.70	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.55	39.0	3.92e-01	77.5%	73.2%
2wj9B00	3.30.70.3580	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Antirestriction protein	0.54	39.0	3.58e-01	73.9%	80.0%
3q9dB01	1.20.58.1050	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.52	30.0	3.34e-01	72.1%	70.8%
1x42A02	1.10.150.240	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2	0.50	34.0	3.82e-01	92.8%	94.0%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4930533	3843.1.1.6 ↗	alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › MrpF_PhaF	0.53	28.0	3.21e-01	73.9%	68.8%
3829031	193.1.1.3 ↗	alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › Ndc80_HEC	0.52	35.0	3.54e-01	70.3%	79.1%
3838170	3558.1.1.1 ↗	alpha arrays › HSDR subunit helical domain › HSDR subunit helical domain › HSDR subunit helical domain › EcoR124_C	0.50	29.0	2.88e-01	87.4%	52.2%
4965639	186.1.1.4 ↗	alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4	0.50	38.0	3.89e-01	98.2%	85.7%