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MF403008.1__AUZ95008.1__X__00226
Bact-VirMF403008.1__AUZ95008.1__X__00226
Identity
- Accession:
- MF403008 ↗
- Kingdom:
- phage
Quality
78.2
mean pLDDT
Taxonomy
TaxID: 2024264
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-64
Domain cluster:
representative
CATH (47)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3dteA02 | 1.10.10.1030 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain | 0.77 | 51.0 | 5.99e-01 | 71.7% | 100.0% |
| 1f20A01 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.75 | 54.0 | 3.85e-01 | 75.0% | 31.9% |
| 2p0wA03 | 1.10.10.390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.72 | 57.0 | 6.02e-01 | 86.7% | 100.0% |
| 4pxoA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.71 | 48.0 | 3.74e-01 | 70.0% | 32.8% |
| 2vqcA00 | 1.10.10.1470 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like | 0.71 | 54.0 | 5.19e-01 | 91.7% | 71.4% |
| 2zxqA06 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.71 | 42.0 | 4.06e-01 | 70.0% | 54.5% |
| 6uqyB01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.70 | 52.0 | 3.40e-01 | 80.0% | 29.4% |
| 3t0yA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 52.0 | 5.21e-01 | 86.7% | 78.3% |
| 2xubA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 53.0 | 4.56e-01 | 81.7% | 65.2% |
| 1txuA01 | 1.10.246.120 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.68 | 59.0 | 5.10e-01 | 98.3% | 90.4% |
| 6tmfT00 | 1.10.60.20 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 | 0.68 | 59.0 | 5.84e-01 | 98.3% | 95.3% |
| 2yn7A00 | 1.10.3160.10 | Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1 | 0.68 | 47.0 | 3.16e-01 | 83.3% | 20.1% |
| 2xzmV01 | 1.10.60.20 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 | 0.68 | 57.0 | 5.71e-01 | 95.0% | 96.7% |
| 4pswA03 | 1.10.10.390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.68 | 53.0 | 5.56e-01 | 86.7% | 100.0% |
| 1rykA00 | 1.10.1470.10 | Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › YjbJ | 0.68 | 52.0 | 4.96e-01 | 81.7% | 73.9% |
| 1ku3A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 53.0 | 5.33e-01 | 86.7% | 88.5% |
| 2aamC00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.66 | 52.0 | 3.32e-01 | 85.0% | 22.4% |
| 2gh1A02 | 1.10.150.350 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.65 | 58.0 | 4.75e-01 | 98.3% | 83.3% |
| 3eetA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 51.0 | 4.97e-01 | 83.3% | 78.5% |
| 3kxaA02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.65 | 48.0 | 4.72e-01 | 81.7% | 98.5% |
| 4eqqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 44.0 | 4.84e-01 | 83.3% | 91.7% |
| 3tl4X02 | 1.10.10.2420 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.63 | 49.0 | 4.69e-01 | 86.7% | 84.7% |
| 2da7A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.63 | 47.0 | 4.56e-01 | 83.3% | 70.4% |
| 3mc1A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.62 | 50.0 | 4.82e-01 | 88.3% | 85.1% |
| 4zo4A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 54.0 | 3.67e-01 | 95.0% | 82.1% |
| 3tacB01 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.61 | 55.0 | 4.27e-01 | 98.3% | 49.6% |
| 2klqA00 | 1.20.58.870 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 54.0 | 4.41e-01 | 100.0% | 64.0% |
| 3kfvA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 47.0 | 3.62e-01 | 88.3% | 76.6% |
| 3lstA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 48.0 | 4.40e-01 | 95.0% | 75.6% |
| 2c5iT00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 47.0 | 4.00e-01 | 85.0% | 85.1% |
| 1oaoC01 | 1.10.8.190 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Carbon monoxide dehydrogenase alpha subunit. Chain M, domain 1 | 0.58 | 48.0 | 3.81e-01 | 90.0% | 47.5% |
| 3zx4A02 | 3.30.980.20 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 | 0.58 | 43.0 | 3.87e-01 | 81.7% | 98.9% |
| 4gxbA02 | 1.20.80.60 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.58 | 34.0 | 3.45e-01 | 73.3% | 56.5% |
| 2gytA01 | 1.10.287.2070 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 46.0 | 4.41e-01 | 91.7% | 91.5% |
| 2go7A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.57 | 44.0 | 4.31e-01 | 88.3% | 89.6% |
| 3tqnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 46.0 | 4.31e-01 | 90.0% | 87.7% |
| 3ungC02 | 1.10.10.1720 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › CRISPR-Cas system, Cmr2 subunit, D2 domain, helical bundle | 0.56 | 45.0 | 4.12e-01 | 88.3% | 74.4% |
| 1w98B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.55 | 47.0 | 3.83e-01 | 100.0% | 50.9% |
| 2oi8A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 46.0 | 3.29e-01 | 100.0% | 58.6% |
| 6ln3A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 44.0 | 3.11e-01 | 91.7% | 36.1% |
| 1s35A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 47.0 | 3.81e-01 | 95.0% | 75.5% |
| 3f0cA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.53 | 40.0 | 4.34e-01 | 96.7% | 98.0% |
| 1ornA02 | 1.10.1670.10 | Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.53 | 39.0 | 3.47e-01 | 85.0% | 58.0% |
| 3nrkA01 | 1.10.4030.10 | Mainly Alpha › Orthogonal Bundle › Triger factor/SurA peptide-binding fold › Porin chaperone SurA, peptide-binding domain | 0.53 | 46.0 | 3.22e-01 | 100.0% | 36.1% |
| 1vhnA02 | 1.10.1200.80 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Putative flavin oxidoreducatase; domain 2 | 0.53 | 40.0 | 3.81e-01 | 81.7% | 90.1% |
| 1rrsA01 | 1.10.1670.10 | Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.52 | 39.0 | 3.30e-01 | 85.0% | 55.9% |
| 3l9tA01 | 1.10.1240.70 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.50 | 36.0 | 3.30e-01 | 80.0% | 56.6% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4969516 | 101.1.15.0 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain | 0.76 | 65.0 | 6.58e-01 | 93.3% | 98.3% |
| 4960839 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 63.0 | 5.25e-01 | 90.0% | 63.0% |
| 3672635 | 101.1.1.295 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_70 | 0.73 | 58.0 | 5.42e-01 | 86.7% | 74.7% |
| 5056132 | 3110.1.1.0 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain | 0.73 | 58.0 | 4.34e-01 | 83.3% | 45.9% |
| 5053497 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 54.0 | 5.42e-01 | 78.3% | 83.3% |
| 3582956 | 101.1.15.2 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain › HAT1_C | 0.72 | 60.0 | 5.69e-01 | 91.7% | 81.4% |
| 3337098 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 56.0 | 4.82e-01 | 86.7% | 60.0% |
| 3243495 | 101.1.1.289 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HOCHOB | 0.71 | 53.0 | 5.48e-01 | 80.0% | 92.7% |
| 5050228 | 7014.1.1.2 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › TauE | 0.70 | 59.0 | 4.64e-01 | 95.0% | 78.3% |
| 3483962 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.67 | 51.0 | 4.52e-01 | 83.3% | 56.7% |
| 3778380 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 53.0 | 5.12e-01 | 88.3% | 84.3% |
| 3215988 | 101.1.1.289 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HOCHOB | 0.67 | 53.0 | 5.24e-01 | 86.7% | 80.0% |
| 3798329 | 3919.1.1.0 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 | 0.67 | 58.0 | 4.82e-01 | 100.0% | 66.4% |
| 3626320 | 3919.1.1.2 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN | 0.67 | 58.0 | 4.81e-01 | 100.0% | 68.2% |
| 3636418 | 2003.1.1.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NmrA | 0.66 | 58.0 | 3.72e-01 | 100.0% | 53.6% |
| 3243459 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 52.0 | 5.26e-01 | 86.7% | 90.0% |
| 3244958 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 56.0 | 5.47e-01 | 100.0% | 90.8% |
| 4932388 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.64 | 48.0 | 4.51e-01 | 83.3% | 74.7% |
| 3623097 | 101.1.1.176 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DEK_C | 0.64 | 53.0 | 5.06e-01 | 93.3% | 87.1% |
| 4466431 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.63 | 55.0 | 3.56e-01 | 100.0% | 54.1% |
| 4018084 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.63 | 49.0 | 4.67e-01 | 83.3% | 84.3% |
| 4984369 | 604.39.1.0 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters | 0.62 | 52.0 | 3.78e-01 | 100.0% | 79.5% |
| 3222445 | 148.1.3.41 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM5_C | 0.61 | 49.0 | 4.75e-01 | 91.7% | 92.8% |
| 1169399 | 101.35.1.2 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › Lipoprotein_Ltp | 0.60 | 47.0 | 4.99e-01 | 90.0% | 100.0% |
| 4147898 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 49.0 | 4.52e-01 | 98.3% | 96.5% |
| 3524494 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.59 | 50.0 | 4.29e-01 | 93.3% | 73.7% |
| 3626769 | 192.5.1.14 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA | 0.59 | 45.0 | 3.87e-01 | 83.3% | 53.3% |
| 3507547 | 4995.1.1.0 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like | 0.59 | 52.0 | 4.95e-01 | 98.3% | 97.1% |
| 3924903 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.59 | 46.0 | 4.57e-01 | 93.3% | 90.8% |
| 3495189 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.58 | 51.0 | 3.63e-01 | 100.0% | 80.0% |
| 3715856 | 101.1.2.166 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM6_C | 0.58 | 49.0 | 4.37e-01 | 98.3% | 71.1% |
| 3519552 | 2002.1.1.96 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › S-methyl_trans | 0.57 | 45.0 | 2.97e-01 | 88.3% | 23.4% |
| 4142346 | 5086.1.1.87 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › ING | 0.55 | 46.0 | 3.70e-01 | 90.0% | 66.4% |
| 3318879 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.55 | 43.0 | 4.26e-01 | 91.7% | 84.6% |
| 3642026 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.55 | 42.0 | 4.36e-01 | 95.0% | 100.0% |
| 4015273 | 101.1.15.1 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS | 0.54 | 44.0 | 3.87e-01 | 93.3% | 72.6% |
| 3505882 | 101.1.6.24 ↗ | alpha arrays › HTH › HTH › TrpR › PF27073 | 0.53 | 44.0 | 4.22e-01 | 100.0% | 97.3% |
| 3184140 | 5086.1.1.87 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › ING | 0.52 | 42.0 | 3.38e-01 | 88.3% | 45.2% |
| 5017062 | 7094.1.1.4 ↗ | alpha bundles › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › PF27273 | 0.52 | 42.0 | 4.00e-01 | 93.3% | 76.0% |