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MF403008.1__AUZ95232.1__X__00473
Bact-VirMF403008.1__AUZ95232.1__X__00473
Identity
- Accession:
- MF403008 ↗
- Kingdom:
- phage
Quality
74.6
mean pLDDT
Taxonomy
TaxID: 2024264
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 23-83
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4pxcA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.58 | 48.0 | 3.18e-01 | 100.0% | 67.0% |
| 2klnA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.58 | 48.0 | 3.95e-01 | 98.4% | 58.9% |
| 1npdB01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.57 | 40.0 | 3.12e-01 | 75.4% | 73.2% |
| 3lw6A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.56 | 42.0 | 2.95e-01 | 86.9% | 41.9% |
| 1w5dA02 | 3.50.80.20 | Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-Ala-D-Ala carboxypeptidase C, peptidase S13 | 0.55 | 41.0 | 3.71e-01 | 90.2% | 70.6% |
| 4s3jB02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 46.0 | 3.11e-01 | 100.0% | 41.5% |
| 1floA01 | 3.30.300.80 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › FLP Recombinase, lambda integrase-like, N-terminal domain (domain 1) | 0.54 | 40.0 | 3.46e-01 | 83.6% | 76.2% |
| 1k77A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.54 | 45.0 | 3.06e-01 | 100.0% | 34.4% |
| 2f46A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.53 | 41.0 | 3.25e-01 | 86.9% | 62.7% |
| 2zgiD02 | 3.20.10.10 | Alpha Beta › Alpha-Beta Barrel › D-amino Acid Aminotransferase; Chain A, domain 2 › D-amino Acid Aminotransferase, subunit A, domain 2 | 0.53 | 38.0 | 2.97e-01 | 78.7% | 65.8% |
| 1fzrA00 | 3.40.91.30 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.53 | 42.0 | 3.44e-01 | 95.1% | 53.5% |
| 2pe3D01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.52 | 43.0 | 3.01e-01 | 100.0% | 66.1% |
| 3snoA02 | 3.20.10.10 | Alpha Beta › Alpha-Beta Barrel › D-amino Acid Aminotransferase; Chain A, domain 2 › D-amino Acid Aminotransferase, subunit A, domain 2 | 0.52 | 38.0 | 3.09e-01 | 78.7% | 54.0% |
| 4e12A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 43.0 | 3.20e-01 | 100.0% | 64.2% |
| 2wyrA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.50 | 41.0 | 2.91e-01 | 100.0% | 69.2% |
| 3bedA00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.50 | 37.0 | 3.12e-01 | 88.5% | 54.6% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3280925 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.64 | 53.0 | 3.61e-01 | 100.0% | 31.4% |
| 3385804 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.59 | 40.0 | 2.77e-01 | 72.1% | 20.0% |
| 3605661 | 2007.2.3.9 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTPlike_phytase | 0.59 | 42.0 | 2.63e-01 | 77.0% | 49.5% |
| 4995152 | 2011.1.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 | 0.58 | 48.0 | 3.27e-01 | 100.0% | 66.0% |
| 4945453 | 2003.1.1.36 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 3HCDH_N | 0.57 | 44.0 | 3.25e-01 | 88.5% | 92.4% |
| 3284400 | 232.1.1.2 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › ADI | 0.56 | 41.0 | 2.84e-01 | 82.0% | 35.7% |
| 4964620 | 2011.1.1.11 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M42 | 0.56 | 45.0 | 3.10e-01 | 96.7% | 70.8% |
| 3989325 | 2007.1.1.16 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase_5 | 0.56 | 45.0 | 3.06e-01 | 96.7% | 40.0% |
| 5050167 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.55 | 44.0 | 2.86e-01 | 98.4% | 74.6% |
| 3484993 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.54 | 45.0 | 2.86e-01 | 100.0% | 23.6% |
| 4166177 | 186.1.1.2 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Flp_N | 0.54 | 40.0 | 3.36e-01 | 82.0% | 74.5% |
| 5000246 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.53 | 43.0 | 2.96e-01 | 100.0% | 48.9% |
| 3653466 | 207.1.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6 | 0.53 | 43.0 | 2.69e-01 | 100.0% | 22.3% |
| 5013512 | 2011.1.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 | 0.52 | 42.0 | 2.91e-01 | 98.4% | 74.5% |
| 4318389 | 2003.1.1.85 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › SpnB_Rossmann | 0.52 | 43.0 | 3.29e-01 | 100.0% | 57.6% |
| 5064330 | 231.1.1.1 ↗ | a+b two layers › MocoBD/DmpA-related › MocoBD/DmpA-related › Molybdenum cofactor-binding domain › MoCoBD_1 | 0.52 | 40.0 | 2.79e-01 | 91.8% | 68.8% |
| 4247071 | 186.1.1.2 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Flp_N | 0.52 | 39.0 | 3.30e-01 | 85.2% | 71.3% |
| 5007582 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.51 | 35.0 | 3.57e-01 | 70.5% | 81.7% |
| 5005699 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.51 | 38.0 | 3.79e-01 | 85.2% | 89.2% |
| 4074592 | 2003.1.4.10 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › TPP_enzyme_M_2 | 0.51 | 42.0 | 3.22e-01 | 100.0% | 47.1% |
| 5030963 | 2003.1.1.27 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › PDH_N | 0.50 | 40.0 | 3.10e-01 | 98.4% | 56.6% |
D2
medium
residues 84-179
Domain cluster:
representative