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MF403008.1__AUZ95247.1__X__00488
Bact-VirMF403008.1__AUZ95247.1__X__00488
Identity
- Accession:
- MF403008 ↗
- Kingdom:
- phage
Quality
87.5
mean pLDDT
Taxonomy
TaxID: 2024264
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-89
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u8vB03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.55 | 40.0 | 3.14e-01 | 79.3% | 33.3% |
| 2yyiA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.55 | 41.0 | 3.21e-01 | 81.6% | 36.5% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3971544 | 1075.3.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold | 0.69 | 45.0 | 3.13e-01 | 70.1% | 20.0% |
| 3366764 | 109.4.1.87 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec6 | 0.62 | 54.0 | 3.83e-01 | 95.4% | 89.1% |
| 4646512 | 633.6.1.3 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › HpaB | 0.60 | 42.0 | 3.16e-01 | 73.6% | 35.9% |
| 1385096 | 633.6.1.3 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › HpaB | 0.56 | 41.0 | 3.21e-01 | 80.5% | 36.3% |
| 5066782 | 633.6.1.3 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › HpaB | 0.55 | 40.0 | 3.15e-01 | 79.3% | 34.1% |
| 1282208 | 633.6.1.3 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › HpaB | 0.53 | 44.0 | 3.31e-01 | 95.4% | 43.3% |
D2
high
residues 126-230
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1eovA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 60.0 | 5.47e-01 | 100.0% | 68.7% |
| 3q8dA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 51.0 | 5.82e-01 | 99.0% | 100.0% |
| 4gs3A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 54.0 | 5.76e-01 | 100.0% | 95.6% |
| 2f4iA02 | 2.40.50.420 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Envelope glycoprotein gp160, DUF2291, alpha/beta domain | 0.68 | 50.0 | 4.92e-01 | 99.0% | 70.4% |
| 4pofA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 54.0 | 5.42e-01 | 100.0% | 85.6% |
| 5odnC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 55.0 | 5.65e-01 | 99.0% | 92.2% |
| 1ue6D00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 55.0 | 5.58e-01 | 100.0% | 91.3% |
| 3trzA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 45.0 | 4.91e-01 | 100.0% | 89.7% |
| 2e8gA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 45.0 | 4.37e-01 | 100.0% | 69.0% |
| 3f6gA02 | 3.30.160.340 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.61 | 35.0 | 4.45e-01 | 75.2% | 96.8% |
| 3rmhB00 | 2.40.50.810 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 56.0 | 5.13e-01 | 100.0% | 78.9% |
| 6mavB02 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 46.0 | 5.02e-01 | 100.0% | 98.9% |
| 4z9cB00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 55.0 | 5.33e-01 | 100.0% | 91.3% |
| 6ro0D00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 52.0 | 5.17e-01 | 100.0% | 91.8% |
| 6lbtA01 | 2.40.50.810 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 53.0 | 4.75e-01 | 100.0% | 72.5% |
| 4ckmB00 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.58 | 43.0 | 3.95e-01 | 79.0% | 91.7% |
| 1jb3A00 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 50.0 | 4.72e-01 | 99.0% | 77.2% |
| 4g79A00 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.58 | 43.0 | 3.98e-01 | 78.1% | 91.0% |
| 2r6hA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 42.0 | 3.75e-01 | 78.1% | 99.3% |
| 1vwxr00 | 3.30.390.110 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.54 | 32.0 | 3.08e-01 | 94.3% | 48.0% |
| 3v0rA01 | 2.40.350.20 | Mainly Beta › Beta Barrel › AOC barrel-like › | 0.53 | 37.0 | 3.55e-01 | 71.4% | 95.0% |
| 2xnjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.53 | 40.0 | 4.03e-01 | 79.0% | 100.0% |
| 1tvcA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 39.0 | 3.86e-01 | 78.1% | 92.7% |
| 3iq2A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.52 | 41.0 | 3.96e-01 | 86.7% | 93.5% |
| 2lp6A00 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.51 | 38.0 | 4.08e-01 | 79.0% | 98.9% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3739833 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 54.0 | 5.39e-01 | 100.0% | 70.0% |
| 3838752 | 2.2.1.10 ↗ | beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › DUF1523 | 0.73 | 68.0 | 5.68e-01 | 100.0% | 64.7% |
| 3853782 | 2.1.1.269 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30822 | 0.72 | 57.0 | 5.49e-01 | 99.0% | 73.3% |
| 3750530 | 2.1.1.269 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30822 | 0.72 | 57.0 | 5.23e-01 | 99.0% | 65.2% |
| 3876051 | 2.1.1.44 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 | 0.72 | 52.0 | 5.68e-01 | 96.2% | 91.8% |
| 4009147 | 2.1.1.292 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30365 | 0.70 | 55.0 | 4.19e-01 | 99.0% | 36.3% |
| 3806487 | 2.1.1.23 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › POT1 | 0.70 | 55.0 | 4.96e-01 | 100.0% | 60.7% |
| 3956143 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 52.0 | 5.60e-01 | 98.1% | 92.2% |
| 3518490 | 2.1.1.110 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › BRCA2DBD_OB2 | 0.67 | 54.0 | 5.28e-01 | 100.0% | 78.3% |
| 2541776 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.67 | 57.0 | 5.70e-01 | 100.0% | 88.1% |
| 3375524 | 2.1.1.229 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 | 0.66 | 56.0 | 5.37e-01 | 100.0% | 80.0% |
| 3612666 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 59.0 | 5.45e-01 | 100.0% | 78.5% |
| 3814285 | 2.1.1.229 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 | 0.65 | 58.0 | 5.70e-01 | 100.0% | 90.9% |
| 3934825 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 46.0 | 4.49e-01 | 100.0% | 67.0% |
| 5080441 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.65 | 54.0 | 5.01e-01 | 100.0% | 71.4% |
| 5011190 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.65 | 53.0 | 5.11e-01 | 100.0% | 76.7% |
| 3409288 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.65 | 53.0 | 5.25e-01 | 98.1% | 82.7% |
| 4028093 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 50.0 | 4.76e-01 | 100.0% | 70.4% |
| 3687330 | 2.1.1.247 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29077 | 0.64 | 57.0 | 5.17e-01 | 100.0% | 72.9% |
| 3589263 | 2.1.1.222 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_YrrC | 0.64 | 47.0 | 5.21e-01 | 100.0% | 100.0% |
| 5037223 | 2.1.1.12 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S28e | 0.64 | 36.0 | 4.53e-01 | 82.9% | 96.7% |
| 5036890 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 49.0 | 4.64e-01 | 100.0% | 68.8% |
| 4942779 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.64 | 54.0 | 5.24e-01 | 99.0% | 83.5% |
| 3489455 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 55.0 | 5.56e-01 | 100.0% | 96.2% |
| 3730323 | 2.1.1.247 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29077 | 0.63 | 57.0 | 5.39e-01 | 100.0% | 83.2% |
| 3623874 | 2.1.1.51 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EXOSC1 | 0.63 | 50.0 | 4.61e-01 | 100.0% | 65.9% |
| 5026916 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.62 | 50.0 | 4.99e-01 | 100.0% | 83.6% |
| 4976822 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.62 | 47.0 | 4.51e-01 | 100.0% | 68.8% |
| 3612838 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 45.0 | 4.79e-01 | 99.0% | 88.9% |
| 3700732 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 45.0 | 4.70e-01 | 99.0% | 85.3% |
| 3918889 | 2.1.1.257 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30832 | 0.62 | 56.0 | 5.21e-01 | 100.0% | 80.0% |
| 3182370 | 2.1.1.247 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29077 | 0.62 | 56.0 | 5.09e-01 | 100.0% | 80.0% |
| 4026991 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 56.0 | 5.17e-01 | 100.0% | 79.9% |
| 3610887 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 52.0 | 5.05e-01 | 100.0% | 84.3% |
| 4929508 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 46.0 | 4.38e-01 | 100.0% | 68.0% |
| 3494172 | 2.1.1.51 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EXOSC1 | 0.61 | 51.0 | 4.42e-01 | 100.0% | 60.0% |
| 3613592 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 56.0 | 4.80e-01 | 100.0% | 69.4% |
| 3232865 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 48.0 | 4.42e-01 | 100.0% | 66.7% |
| 4941242 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.60 | 48.0 | 4.79e-01 | 100.0% | 83.6% |
| 3256260 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 51.0 | 5.17e-01 | 99.0% | 93.3% |
| 3606597 | 2.1.1.25 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_B_exo1 | 0.59 | 50.0 | 4.44e-01 | 100.0% | 64.8% |
| 3261701 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 38.0 | 3.82e-01 | 100.0% | 63.8% |
| 3591158 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 45.0 | 4.30e-01 | 99.0% | 68.8% |
| 3706267 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 54.0 | 4.52e-01 | 100.0% | 61.7% |
| 3471170 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 54.0 | 5.12e-01 | 99.0% | 86.4% |
| 3963716 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 49.0 | 4.89e-01 | 100.0% | 86.4% |
| 5030651 | 2.1.1.364 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF2110 | 0.59 | 47.0 | 4.78e-01 | 99.0% | 88.6% |
| 3706266 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 52.0 | 4.39e-01 | 100.0% | 93.1% |
| 3193911 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.56 | 41.0 | 4.49e-01 | 97.1% | 94.1% |
| 3586322 | 220.1.1.5 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PID | 0.55 | 38.0 | 3.85e-01 | 100.0% | 71.8% |
| 3402635 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.54 | 40.0 | 3.71e-01 | 79.0% | 93.3% |
| 4999913 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 48.0 | 4.53e-01 | 100.0% | 96.8% |
| 5042801 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 47.0 | 4.46e-01 | 100.0% | 93.1% |
| 4444484 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.52 | 41.0 | 4.19e-01 | 82.9% | 97.0% |