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MF403008.1__AUZ95440.1__X__00701

Bact-Vir

MF403008.1__AUZ95440.1__X__00701

Identity

Accession:
MF403008 ↗
Kingdom:
phage

Quality

81.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Polybotosvirus› Agrobacterium_phage_Atu_ph07

TaxID: 2024264

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 59-204
PDB
Domain cluster: rep: NC_073481.1__YP_010756090.1__QEJ66_gp08__00008__D21-190
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF18013.7 best Phage_lysozyme2 78.9 5.80e-22 98.0% 96.4%
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ct5A00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.81 77.0 7.48e-01 99.3% 91.2%
2dqaA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.69 55.0 5.90e-01 90.4% 97.6%
6cfcA01 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.67 61.0 5.89e-01 96.6% 93.8%
1qsaA03 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.67 62.0 5.87e-01 100.0% 89.6%
1mhyG02 1.20.1280.30 Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 2 0.66 24.0 3.28e-01 97.9% 63.0%
1k87A02 1.10.2060.10 Mainly Alpha › Orthogonal Bundle › PutA proline dehydrogenase (PRODH), domain 2 › PutA proline dehydrogenase (PRODH), domain 2 0.63 33.0 3.76e-01 100.0% 66.1%
2k3oA00 1.10.274.60 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain 0.58 36.0 3.83e-01 91.1% 69.0%
3gmfA02 1.10.40.110 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › 0.57 37.0 4.26e-01 87.0% 92.2%
1or7B01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.56 28.0 3.33e-01 100.0% 70.2%
4cqiA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 22.0 2.62e-01 94.5% 49.5%
1pwuA04 3.40.390.10 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) 0.52 37.0 3.29e-01 74.0% 92.8%
4ioeA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.52 22.0 2.85e-01 94.5% 66.7%
3aqbB00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.51 38.0 3.02e-01 78.8% 64.8%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3289790 235.1.1.23 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme2 0.93 88.0 8.61e-01 97.9% 96.8%
1253692 235.1.1.23 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme2 0.82 78.0 7.49e-01 100.0% 90.1%
3587750 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.76 53.0 6.18e-01 81.5% 100.0%
3838879 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.74 67.0 6.67e-01 100.0% 94.6%
4821783 235.1.1.2 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glyco_hydro_19 0.71 63.0 5.82e-01 93.8% 98.9%
3245104 235.1.1.12 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Destabilase 0.65 52.0 5.62e-01 95.2% 100.0%
3306539 7023.1.1.3 ↗ alpha bundles › helical ridge domain of D-alanyl transfer protein › helical ridge domain of D-alanyl transfer protein › helical ridge domain of D-alanyl transfer protein › MBOAT_2 0.52 33.0 3.34e-01 100.0% 63.4%
5023725 3352.1.1.8 ↗ alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PTPS_related 0.50 42.0 3.10e-01 90.4% 95.6%