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MF403009.1__AUZ95471.1__X__00043
Bact-VirMF403009.1__AUZ95471.1__X__00043
Identity
- Accession:
- MF403009 ↗
- Kingdom:
- phage
Quality
80.3
mean pLDDT
Taxonomy
TaxID: 2024265
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 70-132
Domain cluster:
representative
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mdyA00 | 4.10.280.10 | Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain | 0.78 | 54.0 | 5.24e-01 | 93.7% | 66.2% |
| 4m70B00 | 1.10.246.200 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain | 0.78 | 57.0 | 5.02e-01 | 90.5% | 53.8% |
| 4gx0A01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.71 | 59.0 | 5.03e-01 | 92.1% | 73.8% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.70 | 59.0 | 5.48e-01 | 92.1% | 74.0% |
| 7sgrA02 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.70 | 62.0 | 3.96e-01 | 100.0% | 21.0% |
| 2qksA01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 55.0 | 4.62e-01 | 87.3% | 78.3% |
| 3spcA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 61.0 | 4.77e-01 | 98.4% | 72.4% |
| 1y1xB00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.67 | 50.0 | 3.65e-01 | 81.0% | 78.7% |
| 1b04A03 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.66 | 41.0 | 4.15e-01 | 79.4% | 62.9% |
| 3gzfD00 | 1.10.150.420 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Coronavirus nonstructural protein 4 C-terminus | 0.66 | 38.0 | 3.36e-01 | 84.1% | 38.5% |
| 4gzrC00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.66 | 52.0 | 5.34e-01 | 93.7% | 90.2% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.65 | 50.0 | 4.04e-01 | 100.0% | 44.1% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 53.0 | 4.52e-01 | 90.5% | 56.9% |
| 3ousA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.64 | 49.0 | 4.45e-01 | 81.0% | 87.8% |
| 2ktmA00 | 1.10.790.10 | Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain | 0.63 | 46.0 | 4.54e-01 | 81.0% | 76.5% |
| 4oe8C00 | 1.10.8.1170 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.63 | 47.0 | 4.19e-01 | 79.4% | 87.4% |
| 1z6oM00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.63 | 56.0 | 3.97e-01 | 100.0% | 50.8% |
| 3u9rB02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.63 | 54.0 | 3.61e-01 | 100.0% | 77.6% |
| 2oyhA00 | 1.20.5.50 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.62 | 49.0 | 4.93e-01 | 100.0% | 85.9% |
| 3lphC00 | 6.10.140.630 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 44.0 | 4.61e-01 | 92.1% | 81.0% |
| 8f4cA01 | 1.20.85.10 | Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like | 0.62 | 55.0 | 4.31e-01 | 100.0% | 47.7% |
| 2hsbA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.62 | 45.0 | 3.65e-01 | 79.4% | 69.8% |
| 3cdlB02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.61 | 47.0 | 3.75e-01 | 85.7% | 45.9% |
| 3iieB03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.61 | 43.0 | 3.95e-01 | 82.5% | 56.5% |
| 2c2aA01 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.60 | 53.0 | 4.68e-01 | 96.8% | 68.9% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 49.0 | 4.01e-01 | 90.5% | 49.2% |
| 4ysxC00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.59 | 48.0 | 3.81e-01 | 98.4% | 41.8% |
| 6mh4A03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.58 | 39.0 | 3.70e-01 | 77.8% | 55.7% |
| 3umbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.58 | 43.0 | 4.08e-01 | 84.1% | 70.9% |
| 2lrmA00 | 1.10.890.30 | Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › YmgD protein | 0.57 | 41.0 | 3.76e-01 | 76.2% | 72.6% |
| 2i5uA00 | 1.10.10.630 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DnaD domain-like | 0.57 | 39.0 | 3.75e-01 | 77.8% | 59.7% |
| 4fybA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.57 | 45.0 | 3.38e-01 | 88.9% | 75.8% |
| 1am7A00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.55 | 39.0 | 3.03e-01 | 77.8% | 65.6% |
| 3l1nA02 | 1.20.1280.140 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.55 | 41.0 | 3.70e-01 | 81.0% | 57.5% |
| 1e91A00 | 1.20.1160.11 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix | 0.54 | 38.0 | 3.52e-01 | 82.5% | 55.3% |
| 2dodA00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.54 | 38.0 | 3.55e-01 | 84.1% | 57.3% |
| 2cruA01 | 1.10.8.140 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PDCD5, DNA-binding domain | 0.53 | 44.0 | 4.11e-01 | 90.5% | 74.0% |
| 3hzsA00 | 1.10.3810.10 | Mainly Alpha › Orthogonal Bundle › Penicillin binding protein transpeptidase fold › Biosynthetic peptidoglycan transglycosylase-like | 0.53 | 40.0 | 2.89e-01 | 85.7% | 35.9% |
| 2m4eA00 | 1.20.120.1930 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF16691 family | 0.52 | 38.0 | 3.52e-01 | 79.4% | 80.2% |
| 2xheA03 | 3.90.830.10 | Alpha Beta › Alpha-Beta Complex › Syntaxin Binding Protein 1; Chain A, domain 2 › Sec1/Munc18 (SM) protein, domain 3a | 0.51 | 43.0 | 3.50e-01 | 95.2% | 90.1% |
| 2a5yC01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 38.0 | 2.78e-01 | 82.5% | 87.9% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3206612 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.90 | 49.0 | 4.45e-01 | 77.8% | 43.8% |
| 4216519 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.81 | 65.0 | 4.23e-01 | 100.0% | 20.8% |
| 3417153 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.80 | 73.0 | 5.68e-01 | 100.0% | 49.6% |
| 4625812 | 2006.1.4.8 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_5 | 0.78 | 71.0 | 4.71e-01 | 100.0% | 29.2% |
| 3940867 | 632.22.1.67 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › DUF842 | 0.77 | 67.0 | 5.82e-01 | 95.2% | 68.4% |
| 4011947 | 5076.1.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier | 0.77 | 66.0 | 4.19e-01 | 100.0% | 20.3% |
| 3493291 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.76 | 71.0 | 5.04e-01 | 100.0% | 54.1% |
| 3546710 | 3291.1.1.200 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › TAPR1-like | 0.76 | 58.0 | 4.47e-01 | 81.0% | 38.5% |
| 4029754 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.76 | 68.0 | 6.14e-01 | 100.0% | 74.1% |
| 4096069 | 621.1.1.3 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Sey1_3HB | 0.75 | 67.0 | 4.76e-01 | 98.4% | 35.6% |
| 4547274 | 3714.1.1.0 ↗ | a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain | 0.75 | 65.0 | 5.48e-01 | 96.8% | 59.0% |
| 3797019 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.73 | 50.0 | 3.17e-01 | 98.4% | 15.0% |
| 3347927 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.72 | 63.0 | 4.07e-01 | 100.0% | 21.4% |
| 5001129 | 3542.1.1.1 ↗ | alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin | 0.71 | 61.0 | 3.91e-01 | 98.4% | 22.3% |
| 4991390 | 5058.1.1.16 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st_1 | 0.71 | 60.0 | 5.19e-01 | 96.8% | 61.1% |
| None | — | 0.71 | 62.0 | 3.97e-01 | 96.8% | 22.3% | |
| 3937415 | 106.1.1.0 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like | 0.71 | 53.0 | 3.84e-01 | 79.4% | 32.3% |
| 1145753 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.70 | 54.0 | 5.07e-01 | 93.7% | 68.0% |
| 3928768 | 3542.1.1.3 ↗ | alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Peptidase_A22B | 0.69 | 54.0 | 3.47e-01 | 87.3% | 19.4% |
| 4955443 | 3542.1.1.0 ↗ | alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases | 0.69 | 55.0 | 3.65e-01 | 87.3% | 44.8% |
| 3958634 | 5067.1.1.4 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › MMPL | 0.69 | 62.0 | 4.30e-01 | 100.0% | 59.0% |
| 4514462 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.68 | 58.0 | 5.07e-01 | 100.0% | 62.0% |
| 4096596 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.68 | 61.0 | 3.60e-01 | 100.0% | 30.2% |
| 3164721 | 1078.1.1.0 ↗ | extended segments › Bd-type quinol oxidase transmembrane helix subunit › Bd-type quinol oxidase transmembrane helix subunit › Bd-type quinol oxidase transmembrane helix subunit | 0.66 | 55.0 | 4.90e-01 | 93.7% | 64.4% |
| 3965957 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.66 | 58.0 | 5.42e-01 | 98.4% | 78.7% |
| 5074552 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.66 | 60.0 | 4.85e-01 | 98.4% | 80.0% |
| 4079949 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.66 | 56.0 | 3.78e-01 | 100.0% | 25.4% |
| 3279139 | 191.1.1.35 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_35 | 0.66 | 51.0 | 4.17e-01 | 87.3% | 47.2% |
| 4666974 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.66 | 56.0 | 4.02e-01 | 100.0% | 31.6% |
| 4222581 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.65 | 56.0 | 4.70e-01 | 100.0% | 56.4% |
| 3263465 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.63 | 43.0 | 3.96e-01 | 79.4% | 56.2% |
| 3724046 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 54.0 | 3.76e-01 | 95.2% | 35.5% |
| 3270180 | 5063.1.1.0 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK | 0.61 | 49.0 | 4.44e-01 | 92.1% | 67.8% |
| 5063791 | 1075.3.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 | 0.60 | 51.0 | 3.31e-01 | 100.0% | 29.0% |
| 3495550 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.60 | 50.0 | 4.23e-01 | 92.1% | 55.2% |
| 4224947 | 166.1.1.1 ↗ | alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C | 0.55 | 41.0 | 3.59e-01 | 84.1% | 54.3% |
| 3356051 | 101.1.1.138 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › GeBP-like_DBD | 0.55 | 36.0 | 3.20e-01 | 77.8% | 47.8% |
| 5053755 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.53 | 45.0 | 3.57e-01 | 98.4% | 54.3% |
D2
medium
residues 1-67
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7wu7501 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 41.0 | 3.37e-01 | 70.1% | 82.5% |
| 1xttB00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 48.0 | 3.46e-01 | 88.1% | 34.1% |
| 3znuA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.59 | 41.0 | 3.62e-01 | 71.6% | 53.2% |
| 4oycB00 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.59 | 42.0 | 3.79e-01 | 74.6% | 83.1% |
| 4zrlA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.59 | 40.0 | 3.25e-01 | 70.1% | 65.8% |
| 7l1rG01 | 3.40.1380.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › ATP synthase, F1 complex, gamma subunit | 0.58 | 40.0 | 2.82e-01 | 71.6% | 88.5% |
| 2x24A03 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.57 | 41.0 | 2.68e-01 | 77.6% | 36.1% |
| 5dcaA11 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 48.0 | 4.07e-01 | 89.6% | 89.5% |
| 1vkwA01 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.55 | 45.0 | 3.76e-01 | 91.0% | 100.0% |
| 1vdhA01 | 3.30.70.1030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 | 0.55 | 39.0 | 3.16e-01 | 73.1% | 43.0% |
| 1rh5A00 | 1.10.3370.10 | Mainly Alpha › Orthogonal Bundle › Preprotein translocase SecY subunit › SecY subunit domain | 0.55 | 48.0 | 2.98e-01 | 100.0% | 29.3% |
| 2n8lA00 | 3.30.310.210 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.54 | 41.0 | 2.96e-01 | 80.6% | 88.5% |
| 2v79A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 46.0 | 3.89e-01 | 95.5% | 69.6% |
| 4mjgA00 | 3.30.2030.30 | Alpha Beta › 2-Layer Sandwich › TBP-like › | 0.54 | 37.0 | 2.79e-01 | 71.6% | 96.6% |
| 1bd3A00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 46.0 | 3.23e-01 | 95.5% | 71.4% |
| 3gkuA03 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.53 | 37.0 | 3.62e-01 | 71.6% | 97.2% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 37.0 | 3.52e-01 | 73.1% | 69.7% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 40.0 | 3.35e-01 | 85.1% | 75.8% |
| 1n9eA01 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.52 | 40.0 | 2.41e-01 | 86.6% | 41.0% |
| 1d3bB00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 29.0 | 2.78e-01 | 100.0% | 43.2% |
| 6kf9G01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 41.0 | 3.90e-01 | 89.6% | 92.7% |
| 2dlcX02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.50 | 38.0 | 3.08e-01 | 80.6% | 65.1% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5080684 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.68 | 42.0 | 3.20e-01 | 73.1% | 27.1% |
| 4998602 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 47.0 | 3.40e-01 | 82.1% | 68.8% |
| 3469940 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.62 | 45.0 | 3.01e-01 | 76.1% | 96.2% |
| 3960213 | 304.156.1.5 ↗ | a+b two layers › Alpha-beta plaits › DNA translocase FtsK N-terminal domain › DNA translocase FtsK N-terminal domain › PF31086 | 0.62 | 45.0 | 3.81e-01 | 77.6% | 59.1% |
| 3646041 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 43.0 | 3.49e-01 | 71.6% | 42.6% |
| 3218266 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.61 | 45.0 | 2.89e-01 | 79.1% | 82.3% |
| 3937690 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.60 | 42.0 | 2.72e-01 | 73.1% | 88.7% |
| 3220259 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.60 | 43.0 | 2.83e-01 | 79.1% | 85.2% |
| 3580419 | 3914.1.1.2 ↗ | alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › Anoctamin,Anoct_dimer | 0.60 | 46.0 | 2.62e-01 | 85.1% | 81.1% |
| 3443063 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.58 | 50.0 | 3.75e-01 | 100.0% | 58.3% |
| 3939904 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 42.0 | 2.47e-01 | 77.6% | 9.4% |
| 4981888 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 40.0 | 3.80e-01 | 73.1% | 97.5% |
| 2512800 | 304.4.1.9 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Chlor_dismutase | 0.57 | 40.0 | 3.09e-01 | 73.1% | 38.0% |
| 3753851 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.57 | 43.0 | 2.80e-01 | 85.1% | 82.9% |
| 4940432 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 45.0 | 4.14e-01 | 88.1% | 83.3% |
| 4978533 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.56 | 40.0 | 3.26e-01 | 76.1% | 68.9% |
| 4546878 | 5061.1.1.2 ↗ | alpha complex topology › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › SecY,Plug_translocon | 0.56 | 46.0 | 2.82e-01 | 94.0% | 22.1% |
| 5005923 | 5061.1.1.1 ↗ | alpha complex topology › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › SecY | 0.56 | 46.0 | 2.82e-01 | 94.0% | 22.1% |
| 3709549 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.56 | 47.0 | 3.61e-01 | 95.5% | 47.3% |
| 3471446 | 7579.1.1.81 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Arb2 | 0.56 | 46.0 | 2.95e-01 | 89.6% | 71.8% |
| 3794245 | 5001.1.1.5 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 | 0.56 | 43.0 | 3.02e-01 | 82.1% | 59.2% |
| 3175434 | 2004.1.1.361 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UTP25_NTPase-like | 0.55 | 42.0 | 2.54e-01 | 79.1% | 82.0% |
| 3605661 | 2007.2.3.9 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTPlike_phytase | 0.55 | 46.0 | 2.88e-01 | 92.5% | 22.9% |
| 3641171 | 3016.1.1.12 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Alliinase_C | 0.55 | 39.0 | 3.32e-01 | 76.1% | 95.0% |
| 4948980 | 3110.1.1.3 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › AglB_core-like | 0.55 | 42.0 | 3.14e-01 | 86.6% | 54.2% |
| 4595166 | 5076.2.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ | 0.55 | 47.0 | 3.28e-01 | 97.0% | 96.4% |
| 4459698 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.55 | 46.0 | 4.43e-01 | 91.0% | 89.3% |
| 3933064 | 3382.1.1.1 ↗ | alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt | 0.54 | 46.0 | 3.03e-01 | 94.0% | 36.6% |
| 3657425 | 3887.2.1.0 ↗ | a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 | 0.54 | 37.0 | 3.40e-01 | 70.1% | 78.8% |
| 3730160 | 327.17.1.4 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › S-adenosylmethionine synthetase › S-adenosylmethionine synthetase › S-AdoMet_synt_C | 0.54 | 38.0 | 3.27e-01 | 73.1% | 57.0% |
| 3605264 | 2007.2.3.9 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTPlike_phytase | 0.54 | 45.0 | 2.78e-01 | 88.1% | 41.7% |
| 5056444 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.54 | 46.0 | 2.90e-01 | 94.0% | 29.9% |
| 4999429 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.54 | 46.0 | 3.30e-01 | 100.0% | 40.0% |
| 3875765 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.54 | 42.0 | 2.74e-01 | 88.1% | 31.5% |
| 4945650 | 878.1.1.0 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 | 0.53 | 42.0 | 3.65e-01 | 83.6% | 62.0% |
| 3991902 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.53 | 36.0 | 3.01e-01 | 70.1% | 42.7% |
| 3364928 | 2007.2.3.9 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTPlike_phytase | 0.53 | 47.0 | 2.95e-01 | 100.0% | 36.0% |
| 4930169 | 304.103.1.5 ↗ | a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like › TM1586_NiRdase | 0.53 | 45.0 | 3.85e-01 | 95.5% | 85.5% |
| 3262355 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.52 | 40.0 | 3.55e-01 | 80.6% | 64.5% |
| 2609 | 101.1.2.38 ↗ | alpha arrays › HTH › HTH › winged helix domain › RTP | 0.52 | 40.0 | 3.35e-01 | 85.1% | 75.8% |
| 3717848 | 2007.2.3.9 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTPlike_phytase | 0.52 | 41.0 | 2.41e-01 | 94.0% | 59.3% |
| 3380863 | 2007.2.3.9 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTPlike_phytase | 0.52 | 43.0 | 2.49e-01 | 94.0% | 39.6% |
| 5050129 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.52 | 42.0 | 3.57e-01 | 89.6% | 84.5% |
| 4027270 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 38.0 | 2.57e-01 | 79.1% | 36.3% |
| 3656554 | 101.1.2.68 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 | 0.51 | 38.0 | 3.16e-01 | 85.1% | 74.8% |