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MF418016.1__AWD93018.1__HSE3_gp066__00066

Bact-Vir

MF418016.1__AWD93018.1__HSE3_gp066__00066

Identity

Accession:
MF418016 ↗
Kingdom:
phage

Quality

62.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 60-121
PDB
Domain cluster: representative
CATH (58)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 53.0 5.66e-01 100.0% 94.3%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 56.0 5.78e-01 100.0% 89.8%
6ghmC02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 56.0 5.54e-01 100.0% 85.9%
2vgeA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.69 55.0 3.85e-01 100.0% 26.6%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 57.0 5.34e-01 100.0% 74.7%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 56.0 5.10e-01 100.0% 67.9%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 54.0 5.44e-01 100.0% 84.4%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 55.0 5.60e-01 100.0% 91.7%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 54.0 5.50e-01 100.0% 91.5%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 48.0 4.85e-01 100.0% 76.2%
3g1jA00 2.30.30.350 Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. 0.67 57.0 5.13e-01 100.0% 77.8%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 55.0 5.59e-01 100.0% 93.3%
6o5cA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.66 58.0 5.48e-01 100.0% 80.3%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 55.0 5.44e-01 100.0% 85.1%
1ng2A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 43.0 4.97e-01 74.2% 95.5%
6e55A01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.66 59.0 5.57e-01 100.0% 85.1%
3oisB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.65 56.0 3.70e-01 100.0% 28.8%
2ew0A00 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.64 56.0 4.09e-01 100.0% 77.7%
2ckkA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 47.0 4.86e-01 100.0% 87.7%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 57.0 5.30e-01 100.0% 79.5%
2gs5A01 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.63 54.0 3.90e-01 100.0% 72.9%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 45.0 4.60e-01 100.0% 80.6%
5iu1B00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.63 46.0 3.75e-01 77.4% 87.5%
2f5kA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 45.0 4.85e-01 98.4% 100.0%
4c0dB00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.61 47.0 3.41e-01 100.0% 28.3%
4c0fC00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.61 47.0 3.96e-01 100.0% 48.2%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 49.0 4.70e-01 100.0% 79.5%
2j5uA03 2.40.10.350 Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 0.61 50.0 4.62e-01 90.3% 98.8%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 50.0 4.74e-01 100.0% 78.7%
3rd4B00 2.40.50.660 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 43.0 4.03e-01 79.0% 95.1%
3lhoA01 3.10.180.50 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 0.60 41.0 2.84e-01 77.4% 19.2%
3wodG00 2.30.30.1250 Mainly Beta › Roll › SH3 type barrels. › 0.59 48.0 3.96e-01 95.2% 54.3%
1ospO01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.59 40.0 3.38e-01 93.5% 41.9%
7xpkA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.59 51.0 3.95e-01 100.0% 51.0%
3askA02 2.30.30.1150 Mainly Beta › Roll › SH3 type barrels. › 0.59 48.0 3.75e-01 100.0% 39.7%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 49.0 4.73e-01 100.0% 83.3%
2ei0A02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.58 39.0 3.01e-01 71.0% 32.9%
3b5mA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 51.0 4.14e-01 100.0% 99.2%
2qkdA03 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.58 41.0 4.44e-01 88.7% 92.2%
6bogA02 2.30.30.930 Mainly Beta › Roll › SH3 type barrels. › 0.58 41.0 4.20e-01 100.0% 80.0%
2egeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 48.0 4.60e-01 100.0% 81.3%
3pieC09 2.30.30.750 Mainly Beta › Roll › SH3 type barrels. › 0.58 50.0 4.35e-01 100.0% 64.6%
2oa9B02 3.30.70.3570 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MvaI/BcnI restriction endonuclease, recognition domain 0.57 45.0 3.64e-01 88.7% 84.3%
1deuB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.57 48.0 3.24e-01 100.0% 34.1%
5jv4A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 46.0 3.68e-01 96.8% 90.8%
2f5tX02 2.30.30.690 Mainly Beta › Roll › SH3 type barrels. › 0.56 46.0 4.23e-01 100.0% 75.6%
1rcqA01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.54 38.0 2.94e-01 75.8% 49.3%
6qk7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 44.0 2.81e-01 93.5% 96.7%
1mkeA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 45.0 3.57e-01 100.0% 59.7%
3u2gA02 2.60.98.40 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › DU1608 C-terminal domain 0.54 47.0 3.72e-01 100.0% 68.2%
4l8hB00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.53 46.0 3.69e-01 96.8% 78.9%
3nqzA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 44.0 4.01e-01 93.5% 79.8%
5cdhG00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.53 45.0 2.90e-01 100.0% 97.8%
3co8A01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.53 37.0 2.89e-01 75.8% 52.0%
2ciuA00 3.10.450.320 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 0.53 44.0 3.65e-01 98.4% 77.2%
3gp6A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.52 44.0 3.39e-01 100.0% 62.6%
3p51A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 44.0 3.38e-01 96.8% 60.0%
7ob9B01 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.50 41.0 2.99e-01 95.2% 91.7%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3743614 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.83 61.0 6.20e-01 100.0% 80.0%
4118011 4.1.1.248 beta barrels › SH3 › SH3 › SH3 › CABIT 0.82 69.0 6.19e-01 100.0% 67.1%
4405469 4.1.1.248 beta barrels › SH3 › SH3 › SH3 › CABIT 0.81 68.0 5.85e-01 100.0% 60.0%
4542692 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 68.0 6.08e-01 100.0% 69.4%
3171521 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.78 54.0 5.94e-01 85.5% 90.0%
4055974 4.1.1.248 beta barrels › SH3 › SH3 › SH3 › CABIT 0.77 68.0 5.36e-01 100.0% 48.0%
4027263 4.1.1.104 beta barrels › SH3 › SH3 › SH3 › KN17_SH3 0.74 57.0 4.54e-01 100.0% 42.5%
4960540 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 60.0 5.95e-01 100.0% 84.6%
4955420 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.73 54.0 3.45e-01 77.4% 89.8%
3259841 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 64.0 6.18e-01 100.0% 87.1%
3519774 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 54.0 4.52e-01 100.0% 47.6%
4614716 4.1.1.292 beta barrels › SH3 › SH3 › SH3 › SH3_Rv2311 0.71 63.0 6.11e-01 100.0% 95.7%
3484084 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 57.0 4.91e-01 100.0% 56.8%
3732571 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 59.0 6.06e-01 100.0% 95.0%
3482868 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 56.0 5.89e-01 100.0% 96.4%
3491785 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.70 62.0 5.08e-01 100.0% 65.2%
3398464 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 54.0 5.75e-01 98.4% 94.5%
3416068 4.1.1.187 beta barrels › SH3 › SH3 › SH3 › DIRP 0.69 54.0 4.07e-01 100.0% 34.2%
3484007 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 55.0 5.35e-01 100.0% 77.1%
3473172 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 57.0 5.29e-01 100.0% 71.2%
3622911 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 56.0 5.46e-01 100.0% 80.0%
3749194 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.69 55.0 5.52e-01 100.0% 84.4%
4059465 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.68 49.0 4.79e-01 100.0% 70.6%
3440094 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.68 49.0 4.96e-01 100.0% 80.0%
3931715 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 59.0 5.08e-01 100.0% 95.0%
3730229 4.1.1.102 beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.67 51.0 4.79e-01 100.0% 68.0%
1144827 4.1.1.79 beta barrels › SH3 › SH3 › SH3 › DUF3601 0.67 57.0 5.15e-01 100.0% 78.7%
3669262 708.1.2.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like 0.67 53.0 3.24e-01 88.7% 19.2%
3706000 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.66 58.0 5.45e-01 100.0% 84.0%
4001172 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.66 53.0 5.15e-01 100.0% 78.6%
3170922 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.66 52.0 5.05e-01 100.0% 77.9%
1545879 4.1.1.120 beta barrels › SH3 › SH3 › SH3 › SH3_16 0.66 58.0 4.97e-01 100.0% 99.0%
3216019 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 56.0 5.53e-01 100.0% 92.3%
3207081 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.65 57.0 5.67e-01 100.0% 93.8%
3672445 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 49.0 3.81e-01 100.0% 35.2%
4655719 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.65 57.0 5.05e-01 100.0% 67.8%
3177899 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 57.0 4.68e-01 100.0% 74.8%
1386398 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 50.0 4.78e-01 100.0% 72.0%
3490689 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 49.0 4.83e-01 100.0% 77.1%
3972820 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 55.0 5.15e-01 100.0% 90.0%
3481726 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 51.0 5.26e-01 96.8% 91.7%
3477037 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 55.0 5.31e-01 100.0% 84.3%
3235213 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.64 50.0 4.10e-01 91.9% 67.7%
3780847 4.1.1.187 beta barrels › SH3 › SH3 › SH3 › DIRP 0.64 47.0 3.64e-01 100.0% 34.0%
3890362 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 54.0 5.27e-01 96.8% 85.7%
5023763 4237.1.1.1 beta barrels › FomD-like › FomD-like › FomD-like › DUF402 0.63 50.0 3.76e-01 88.7% 41.2%
3705995 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 55.0 5.07e-01 100.0% 96.2%
3744711 4.1.1.41 beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C 0.62 49.0 3.57e-01 100.0% 31.2%
3924619 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 48.0 3.88e-01 100.0% 43.3%
3294025 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.62 50.0 5.29e-01 95.2% 100.0%
3395150 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 45.0 4.61e-01 100.0% 81.7%
3210897 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 53.0 4.74e-01 100.0% 69.4%
3608562 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 46.0 3.59e-01 100.0% 34.6%
3702177 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 54.0 4.59e-01 100.0% 81.0%
3214131 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 42.0 4.01e-01 100.0% 60.0%
3812766 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.60 50.0 4.82e-01 100.0% 84.3%
5032461 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 48.0 4.79e-01 100.0% 89.2%
4250478 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.59 49.0 3.92e-01 93.5% 47.7%
4882197 219.1.1.28 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.58 49.0 4.03e-01 100.0% 51.7%
158911 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.58 49.0 4.30e-01 100.0% 63.9%
4026653 220.1.1.11 beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru 0.58 46.0 3.91e-01 91.9% 90.0%
3501337 4.1.1.169 beta barrels › SH3 › SH3 › SH3 › DUF4819 0.57 49.0 4.58e-01 100.0% 81.2%
3713334 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.57 43.0 4.42e-01 100.0% 93.3%
4951886 3174.4.1.0 beta barrels › Ribosomal protein L14-like › Hypothetical protein NegoA.19184.a N-terminal domain › Hypothetical protein NegoA.19184.a N-terminal domain 0.57 49.0 4.37e-01 100.0% 73.3%
4545520 4.7.1.7 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › WYL 0.56 44.0 4.12e-01 100.0% 69.4%
3625263 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 47.0 4.09e-01 100.0% 66.0%
5025498 4.15.1.2 beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.55 45.0 4.09e-01 100.0% 67.8%
4964141 4.15.1.2 beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.55 45.0 4.12e-01 100.0% 71.1%
3710606 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.54 44.0 3.57e-01 96.8% 77.0%
4142302 5.1.4.16 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A 0.54 46.0 2.94e-01 100.0% 36.7%
3704471 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 44.0 4.05e-01 100.0% 96.7%
3264986 220.1.1.11 beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru 0.53 45.0 3.84e-01 100.0% 78.2%
5061502 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 37.0 3.05e-01 77.4% 95.7%
4249663 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 36.0 3.04e-01 77.4% 80.0%
D2 high residues 210-308
PDB