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MF418016.1__AWD93074.1__HSE3_gp122__00122
Bact-VirMF418016.1__AWD93074.1__HSE3_gp122__00122
Identity
- Accession:
- MF418016 ↗
- Kingdom:
- phage
Quality
53.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 8-22_43-87
D2
medium
residues 91-134
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mvpA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.72 | 49.0 | 4.87e-01 | 84.1% | 68.1% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 48.0 | 4.13e-01 | 72.7% | 46.3% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 58.0 | 5.36e-01 | 97.7% | 87.9% |
| 3ragB00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.69 | 54.0 | 3.44e-01 | 90.9% | 17.3% |
| 4qbuA02 | 3.40.366.10 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 | 0.69 | 60.0 | 3.74e-01 | 100.0% | 53.9% |
| 2zb9A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 47.0 | 4.55e-01 | 84.1% | 64.0% |
| 4kmfA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 46.0 | 4.14e-01 | 72.7% | 50.0% |
| 1z05A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 46.0 | 3.90e-01 | 72.7% | 43.1% |
| 2fd5A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.66 | 45.0 | 4.45e-01 | 84.1% | 66.7% |
| 4jneA03 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.66 | 57.0 | 4.58e-01 | 100.0% | 78.4% |
| 2x1dA02 | 1.10.10.2120 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.65 | 53.0 | 4.57e-01 | 95.5% | 91.9% |
| 4ijaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 44.0 | 3.90e-01 | 72.7% | 47.6% |
| 3d2fA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.63 | 52.0 | 4.40e-01 | 100.0% | 77.4% |
| 2btoA03 | 1.10.287.600 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.62 | 44.0 | 4.15e-01 | 86.4% | 61.1% |
| 4g6dB02 | 6.10.140.1800 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 50.0 | 4.22e-01 | 100.0% | 53.1% |
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.61 | 51.0 | 3.26e-01 | 100.0% | 18.8% |
| 7y9hB01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.60 | 51.0 | 3.11e-01 | 100.0% | 36.5% |
| 3nbiA01 | 1.10.8.1020 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecQ-mediated genome instability protein 1, N-terminal domain | 0.59 | 49.0 | 4.48e-01 | 93.2% | 86.2% |
| 1fc6A01 | 3.30.750.44 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.59 | 42.0 | 3.31e-01 | 77.3% | 92.9% |
| 1b3qA01 | 1.10.287.560 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Histidine kinase CheA-like, homodimeric domain | 0.59 | 40.0 | 3.59e-01 | 72.7% | 58.1% |
| 1lliA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.58 | 49.0 | 3.98e-01 | 100.0% | 70.8% |
| 4u7bA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 38.0 | 4.04e-01 | 70.5% | 89.7% |
| 1iv8A03 | 1.10.150.200 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Maltooligosyl trehalose synthase; domain 3 | 0.55 | 46.0 | 3.78e-01 | 97.7% | 100.0% |
| 3fyaB00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.55 | 42.0 | 3.77e-01 | 100.0% | 88.3% |
| 3ddhA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.52 | 44.0 | 3.72e-01 | 100.0% | 65.4% |
| 3djaA01 | 1.20.920.70 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.52 | 41.0 | 3.01e-01 | 97.7% | 42.8% |
| 1xd7A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 43.0 | 3.24e-01 | 97.7% | 41.4% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4929317 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 50.0 | 4.78e-01 | 75.0% | 60.0% |
| 3923654 | 101.1.1.356 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_11 | 0.73 | 48.0 | 4.28e-01 | 75.0% | 50.0% |
| 5004094 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.71 | 46.0 | 4.06e-01 | 70.5% | 46.2% |
| 1764926 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 46.0 | 4.55e-01 | 75.0% | 62.5% |
| 2605926 | 2007.1.19.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › Acyl_transf_1 | 0.71 | 60.0 | 4.36e-01 | 97.7% | 75.8% |
| 3941670 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.70 | 47.0 | 3.96e-01 | 72.7% | 41.3% |
| 5062267 | 101.1.2.673 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N | 0.69 | 45.0 | 3.99e-01 | 70.5% | 46.2% |
| 3334028 | 101.1.4.62 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › PF30988 | 0.69 | 59.0 | 4.63e-01 | 95.5% | 95.6% |
| 4970108 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.69 | 46.0 | 4.46e-01 | 72.7% | 62.0% |
| 5054061 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.67 | 57.0 | 3.41e-01 | 100.0% | 21.2% |
| 5020322 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.66 | 58.0 | 3.69e-01 | 100.0% | 29.8% |
| 5030083 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 45.0 | 4.30e-01 | 77.3% | 62.0% |
| 3924290 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 43.0 | 4.31e-01 | 75.0% | 66.7% |
| 5067920 | 3883.1.1.1 ↗ | alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf | 0.65 | 51.0 | 3.41e-01 | 86.4% | 38.8% |
| 4886046 | 511.1.1.1 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 | 0.65 | 56.0 | 3.64e-01 | 100.0% | 32.9% |
| 5060508 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.63 | 39.0 | 4.01e-01 | 84.1% | 65.0% |
| 3571030 | 103.1.1.100 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › DUF7816 | 0.61 | 45.0 | 4.57e-01 | 86.4% | 80.0% |
| 3563353 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.61 | 42.0 | 3.56e-01 | 72.7% | 44.0% |
| 4978612 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.59 | 41.0 | 3.68e-01 | 72.7% | 60.0% |
| 4610234 | 101.1.2.89 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR | 0.59 | 40.0 | 3.61e-01 | 70.5% | 58.3% |
| 3596444 | 632.13.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like | 0.57 | 50.0 | 4.97e-01 | 97.7% | 100.0% |
| 4188486 | 152.1.2.1 ↗ | alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RNA polymerase omega subunit › RNA_pol_Rpb6 | 0.57 | 48.0 | 3.98e-01 | 100.0% | 72.9% |
| 3506389 | 632.13.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like | 0.57 | 48.0 | 4.85e-01 | 97.7% | 100.0% |
| 4040211 | 101.1.2.89 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR | 0.56 | 38.0 | 3.49e-01 | 70.5% | 58.3% |
| 4966784 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 38.0 | 3.46e-01 | 72.7% | 60.0% |
| 3373591 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.55 | 43.0 | 4.31e-01 | 93.2% | 93.3% |
| 3525151 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.55 | 38.0 | 3.82e-01 | 72.7% | 86.7% |
| 3732913 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.54 | 47.0 | 3.18e-01 | 100.0% | 49.1% |
| 3996254 | 109.1.1.16 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_6 | 0.51 | 35.0 | 2.98e-01 | 72.7% | 44.0% |