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MF431616.1__AYP28110.1__vBLenPICBM2__51__00051
Bact-VirMF431616.1__AYP28110.1__vBLenPICBM2__51__00051
Identity
- Accession:
- MF431616 ↗
- Kingdom:
- phage
Quality
92.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Zobellviridae›
Veravirus›
Lentibacter_phage_vB_LenP_ICBM2
TaxID: 2847823
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 59-97_359-402
Domain cluster:
rep: BML_coassembly_scaffold_172_curated_closed_complete_prodigal-single.1__X__X__00008__D242-335
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qexA02 | 2.60.120.640 | Mainly Beta › Sandwich › Jelly Rolls › gp9 | 0.70 | 63.0 | 5.86e-01 | 100.0% | 84.5% |
| 4f54A00 | 3.30.160.670 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.68 | 58.0 | 4.51e-01 | 95.2% | 71.0% |
| 2b7yA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 53.0 | 4.20e-01 | 98.8% | 97.8% |
| 3u1xA00 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.58 | 49.0 | 3.72e-01 | 96.4% | 68.2% |
| 3kf8B00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 48.0 | 4.28e-01 | 95.2% | 80.8% |
| 3u50C01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 46.0 | 4.01e-01 | 94.0% | 97.6% |
| 3f8tA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 44.0 | 4.55e-01 | 95.2% | 95.0% |
| 1accA02 | 2.60.120.240 | Mainly Beta › Sandwich › Jelly Rolls › Protective antigen, heptamerisation domain | 0.53 | 42.0 | 3.31e-01 | 89.2% | 70.7% |
| 3k0xA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 44.0 | 4.20e-01 | 95.2% | 79.8% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3579853 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.66 | 53.0 | 4.74e-01 | 88.0% | 84.2% |
| 3717832 | 7525.1.1.1 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_1 | 0.56 | 47.0 | 3.27e-01 | 97.6% | 86.7% |
| 3739833 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 48.0 | 4.36e-01 | 97.6% | 90.0% |
| 4931880 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 42.0 | 4.44e-01 | 95.2% | 100.0% |
| 3306448 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 46.0 | 3.64e-01 | 95.2% | 85.9% |
| 4939349 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.53 | 42.0 | 3.87e-01 | 89.2% | 85.2% |
| 4162388 | 2.1.1.224 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29084 | 0.53 | 43.0 | 3.71e-01 | 89.2% | 77.7% |
| 5068198 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 33.0 | 3.49e-01 | 90.4% | 74.3% |
| 3995470 | 2.1.1.217 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_DEPS-1_3rd | 0.52 | 36.0 | 3.84e-01 | 71.1% | 92.9% |
| 3845979 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 44.0 | 3.89e-01 | 95.2% | 73.6% |
| 4928221 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.52 | 43.0 | 3.79e-01 | 92.8% | 80.6% |
| 3977338 | 5.1.3.17 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylsulfotrans | 0.51 | 45.0 | 3.03e-01 | 100.0% | 38.5% |
| 5027798 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.51 | 43.0 | 4.37e-01 | 94.0% | 100.0% |
| 3931552 | 2.1.1.92 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_D_N | 0.51 | 40.0 | 3.46e-01 | 89.2% | 90.0% |
| 4984946 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 42.0 | 3.83e-01 | 94.0% | 75.7% |
| 4271190 | 2.1.1.24 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE | 0.51 | 42.0 | 3.61e-01 | 94.0% | 64.3% |
| 5068438 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.51 | 42.0 | 3.68e-01 | 94.0% | 66.2% |
| 4943514 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.50 | 42.0 | 4.33e-01 | 95.2% | 96.2% |
D2
medium
residues 120-243