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MF448570.1__ASZ71887.1__96401_42__00042
Bact-VirMF448570.1__ASZ71887.1__96401_42__00042
Identity
- Accession:
- MF448570 ↗
- Kingdom:
- phage
Quality
79.8
mean pLDDT
Taxonomy
TaxID: 2029674
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-71
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yowA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.58 | 42.0 | 2.99e-01 | 78.3% | 53.0% |
| 1wy5A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 35.0 | 2.61e-01 | 89.9% | 22.6% |
| 2r40D00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.51 | 42.0 | 2.98e-01 | 97.1% | 27.9% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4008202 | 192.8.1.60 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › DUF2542 | 0.59 | 41.0 | 3.98e-01 | 73.9% | 75.9% |
| 3212615 | 188.1.1.1 ↗ | alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep | 0.58 | 42.0 | 2.86e-01 | 76.8% | 53.7% |
| 3738350 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.56 | 37.0 | 3.44e-01 | 89.9% | 52.2% |
| 4782097 | 5001.1.1.6 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Bac_rhodopsin | 0.54 | 37.0 | 3.79e-01 | 73.9% | 72.5% |
| 53123 | 188.1.1.0 ↗ | alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain | 0.52 | 43.0 | 3.06e-01 | 95.7% | 78.8% |
| 3398332 | 188.1.1.1 ↗ | alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep | 0.52 | 41.0 | 2.91e-01 | 94.2% | 74.6% |
| 3207999 | 3660.1.1.4 ↗ | alpha bundles › Protein-export membrane protein secG › Protein-export membrane protein secG › Protein-export membrane protein secG › DUF7785 | 0.51 | 37.0 | 3.29e-01 | 75.4% | 68.4% |
| 3231065 | 188.1.1.1 ↗ | alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep | 0.51 | 41.0 | 2.91e-01 | 92.8% | 85.7% |
| 4645454 | 1008.1.1.109 ↗ | alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › Pex2_Pex12 | 0.51 | 36.0 | 3.33e-01 | 75.4% | 64.4% |
| 3786864 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.51 | 42.0 | 3.93e-01 | 97.1% | 91.1% |
| 3228329 | 188.1.1.1 ↗ | alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep | 0.50 | 42.0 | 2.91e-01 | 95.7% | 28.5% |