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MF477236.1__ASU00783.1__NTR1_12__00012
Bact-VirMF477236.1__ASU00783.1__NTR1_12__00012
Identity
- Accession:
- MF477236 ↗
- Kingdom:
- phage
Quality
88.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-141
Domain cluster:
rep: MN444870.1__QGH75793.1__SEA_SYLEON_64__00064__D3-131
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF24240.2 best | DUF7448 | 79.8 | 3.00e-22 | 88.4% | 100.0% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gu3A01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.71 | 32.0 | 4.35e-01 | 95.9% | 81.5% |
| 2gu3A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 31.0 | 4.05e-01 | 95.9% | 84.1% |
| 2z4hA01 | 2.40.128.300 | Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain | 0.64 | 28.0 | 3.44e-01 | 85.1% | 62.0% |
| 4ifdE00 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.52 | 36.0 | 2.76e-01 | 70.2% | 87.3% |
| 2vqeL00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 37.0 | 3.72e-01 | 87.6% | 74.2% |
| 1av4A03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.51 | 46.0 | 3.16e-01 | 100.0% | 54.5% |
| 3oe3C00 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.51 | 30.0 | 3.40e-01 | 99.2% | 78.4% |
| 1f9cA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 41.0 | 4.09e-01 | 87.6% | 91.8% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3906565 | 220.1.1.164 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26089 | 0.72 | 33.0 | 2.69e-01 | 89.3% | 24.7% |
| 141833 | 9.11.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like › MliC | 0.69 | 27.0 | 3.26e-01 | 85.1% | 51.8% |
| 1678532 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.68 | 33.0 | 4.28e-01 | 95.9% | 81.4% |
| 4888761 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.66 | 34.0 | 2.90e-01 | 96.7% | 30.5% |
| 3445812 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.64 | 39.0 | 3.74e-01 | 99.2% | 52.1% |
| 3690224 | 5.1.3.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40 | 0.58 | 36.0 | 2.48e-01 | 96.7% | 17.8% |
| 5018171 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.57 | 29.0 | 3.55e-01 | 96.7% | 76.0% |
| 4057824 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.56 | 30.0 | 3.02e-01 | 96.7% | 46.9% |
| 3197575 | 2.1.1.1 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 | 0.56 | 34.0 | 3.86e-01 | 92.6% | 80.0% |
| 3287567 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.54 | 33.0 | 3.74e-01 | 100.0% | 82.2% |
| 4946970 | 218.1.1.10 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_C | 0.54 | 44.0 | 4.24e-01 | 87.6% | 91.1% |
| 4973114 | 218.1.1.0 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like | 0.53 | 38.0 | 4.23e-01 | 88.4% | 95.8% |
| 3791987 | 2.1.1.25 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_B_exo1 | 0.53 | 37.0 | 3.81e-01 | 71.9% | 87.0% |
| 4416106 | 2.1.1.1 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 | 0.52 | 38.0 | 3.67e-01 | 87.6% | 67.9% |
| 1000222 | 2.1.1.1 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 | 0.52 | 37.0 | 4.14e-01 | 89.3% | 98.9% |
| 4984315 | 218.1.1.2 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N | 0.51 | 42.0 | 4.02e-01 | 89.3% | 84.1% |
| 3473974 | 218.1.1.0 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like | 0.51 | 41.0 | 3.91e-01 | 88.4% | 84.1% |
| 163477 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.51 | 39.0 | 4.06e-01 | 88.4% | 88.6% |
| 4944520 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.50 | 35.0 | 2.87e-01 | 71.9% | 87.0% |