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MF580772.1__ATI19992.1__R1_021__00021

Bact-Vir

MF580772.1__ATI19992.1__R1_021__00021

Identity

Accession:
MF580772 ↗
Kingdom:
phage

Quality

82.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Aliceevansviridae› Moineauvirus› Streptococcus_phage_R1

TaxID: 2041507

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-66
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05382.20 best Amidase_5 28.7 1.50e-06 100.0% 32.4%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2p1gA01 1.10.3670.10 Mainly Alpha › Orthogonal Bundle › Putative xylanase fold › Putative xylanase like domain 0.72 61.0 4.85e-01 93.8% 72.1%
5g5gA02 1.10.150.120 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain 0.54 40.0 3.62e-01 96.9% 56.7%
2w96A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.52 40.0 3.43e-01 90.6% 49.6%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
154189 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.79 72.0 5.69e-01 100.0% 98.4%
3963980 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.74 66.0 5.10e-01 100.0% 51.0%
3813017 103.4.1.0 ↗ alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein 0.61 41.0 3.65e-01 71.9% 47.4%
4015665 633.12.1.0 ↗ alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like 0.55 37.0 3.61e-01 70.3% 63.8%
3255275 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.54 37.0 3.83e-01 85.9% 76.7%