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MF595878.1__ATB52708.1__X__00021
Bact-VirMF595878.1__ATB52708.1__X__00021
Identity
- Accession:
- MF595878 ↗
- Kingdom:
- phage
Quality
70.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-105
Domain cluster:
rep: IMGVR_UViG_3300021513_000102-3300021513-Ga0190315_10005481__D86-160
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04492.20 best | Phage_rep_O | 70.2 | 2.40e-19 | 100.0% | 89.5% |
D2
medium
residues 200-290
Domain cluster:
rep: OP341629.1__UYL94147.1__PK52_gp43__00043__D178-259
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d8bB02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.67 | 52.0 | 5.41e-01 | 82.4% | 95.1% |
| 5hn3A00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.64 | 44.0 | 3.00e-01 | 71.4% | 95.5% |
| 2hqcA01 | 1.20.1640.10 | Mainly Alpha › Up-down Bundle › Multidrug efflux transporter AcrB transmembrane fold › Multidrug efflux transporter AcrB transmembrane domain | 0.60 | 49.0 | 3.82e-01 | 89.0% | 63.4% |
| 2qkwA00 | 1.20.1270.140 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AvrPto | 0.60 | 42.0 | 4.06e-01 | 72.5% | 94.1% |
| 4hfkB00 | 1.20.120.1620 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.55 | 44.0 | 4.37e-01 | 89.0% | 82.7% |
| 1u02A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.55 | 43.0 | 3.66e-01 | 84.6% | 97.4% |
| 1dn1B00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 37.0 | 2.82e-01 | 71.4% | 69.4% |
| 1hciA04 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 38.0 | 3.49e-01 | 72.5% | 86.8% |
| 1hkvA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.54 | 38.0 | 2.76e-01 | 73.6% | 93.5% |
| 3m9vA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.53 | 37.0 | 3.09e-01 | 72.5% | 80.9% |
| 2gz4A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.52 | 36.0 | 2.88e-01 | 72.5% | 40.0% |
| 2bvlA01 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 43.0 | 4.48e-01 | 91.2% | 100.0% |
| 7odhL01 | 1.10.645.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B | 0.51 | 42.0 | 2.66e-01 | 93.4% | 67.1% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4179239 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.94 | 84.0 | 7.95e-01 | 93.4% | 87.6% |
| 3988210 | 4230.1.1.3 ↗ | alpha arrays › DnaD domain › DnaD domain › DnaD domain › DnaB_2 | 0.73 | 54.0 | 5.32e-01 | 84.6% | 74.7% |
| 4030825 | 148.1.3.59 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Phg_2220_C | 0.72 | 56.0 | 5.96e-01 | 84.6% | 95.0% |
| 4015710 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.67 | 55.0 | 5.63e-01 | 95.6% | 96.5% |
| 3244215 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.67 | 41.0 | 4.81e-01 | 81.3% | 93.3% |
| 3648058 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.66 | 45.0 | 4.64e-01 | 83.5% | 74.1% |
| 5061574 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.66 | 48.0 | 5.16e-01 | 84.6% | 93.3% |
| 3435433 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.64 | 47.0 | 4.86e-01 | 86.8% | 82.4% |
| 5030243 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.63 | 40.0 | 4.78e-01 | 79.1% | 98.3% |
| 3256076 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.63 | 45.0 | 4.66e-01 | 85.7% | 82.4% |
| 3533133 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.62 | 42.0 | 4.47e-01 | 85.7% | 81.2% |
| 3229657 | 148.1.3.27 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_10 | 0.61 | 48.0 | 5.01e-01 | 87.9% | 97.5% |
| 3591322 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.59 | 45.0 | 2.90e-01 | 83.5% | 85.8% |
| 3486206 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.57 | 41.0 | 4.39e-01 | 84.6% | 93.3% |
| 5078610 | 601.7.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HepT-like | 0.57 | 32.0 | 3.30e-01 | 87.9% | 55.6% |
| 1671339 | 166.1.1.1 ↗ | alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C | 0.56 | 43.0 | 4.21e-01 | 84.6% | 87.3% |
| 3931221 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.56 | 41.0 | 3.41e-01 | 78.0% | 45.5% |
| 3382035 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.55 | 38.0 | 3.91e-01 | 72.5% | 74.4% |
| 3283630 | 601.7.1.18 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN_SAV_6107 | 0.55 | 39.0 | 3.68e-01 | 73.6% | 92.7% |
| None | — | 0.54 | 43.0 | 3.39e-01 | 91.2% | 100.0% | |
| 4028482 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.53 | 39.0 | 3.41e-01 | 76.9% | 82.1% |
| 3992612 | 604.6.1.1 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT | 0.53 | 36.0 | 3.64e-01 | 70.3% | 98.9% |
| 3736610 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.52 | 45.0 | 4.46e-01 | 98.9% | 91.0% |
| 3258339 | 101.1.10.12 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Spy1 | 0.52 | 42.0 | 3.66e-01 | 89.0% | 73.6% |
| 5078806 | 601.7.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HepT-like | 0.51 | 35.0 | 3.16e-01 | 71.4% | 78.5% |
| 4315742 | 166.1.1.1 ↗ | alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C | 0.51 | 38.0 | 3.83e-01 | 81.3% | 86.3% |
| 3737705 | 605.4.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein › DUF202 | 0.51 | 36.0 | 3.52e-01 | 73.6% | 95.0% |
| 4130802 | 181.1.1.1 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N | 0.50 | 37.0 | 3.83e-01 | 79.1% | 89.4% |