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MF614628.1__ATE84723.1__phi3LM21_p37__00037
Bact-VirMF614628.1__ATE84723.1__phi3LM21_p37__00037
Identity
- Accession:
- MF614628 ↗
- Kingdom:
- phage
Quality
85.1
mean pLDDT
Cluster
View cluster (9 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-109
Domain cluster:
rep: OR234010.1__WNV46927.1__LPLmcIH19_0010__00010__D13-114
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05354.18 best | Phage_attach | 48.8 | 1.30e-12 | 99.0% | 86.9% |
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3stjA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.72 | 50.0 | 5.41e-01 | 89.4% | 87.1% |
| 4rt0A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.70 | 52.0 | 5.20e-01 | 89.4% | 74.3% |
| 1ylnA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.70 | 56.0 | 5.46e-01 | 89.4% | 77.2% |
| 1ywuA00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.69 | 48.0 | 4.53e-01 | 89.4% | 59.2% |
| 3lnnA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.69 | 48.0 | 5.06e-01 | 76.0% | 79.6% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.69 | 54.0 | 5.16e-01 | 89.4% | 70.5% |
| 2z9iC01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.67 | 48.0 | 5.06e-01 | 91.3% | 83.7% |
| 2aq6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.67 | 55.0 | 4.96e-01 | 89.4% | 83.9% |
| 4r8tB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.66 | 40.0 | 4.62e-01 | 89.4% | 84.9% |
| 1vl7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.66 | 55.0 | 5.05e-01 | 89.4% | 86.7% |
| 4rqyA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.66 | 49.0 | 4.69e-01 | 92.3% | 66.7% |
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.66 | 52.0 | 4.32e-01 | 90.4% | 49.1% |
| 2i51B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.66 | 55.0 | 4.49e-01 | 90.4% | 71.7% |
| 2asfA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.66 | 54.0 | 5.13e-01 | 89.4% | 83.2% |
| 1k0hA00 | 2.40.10.180 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins | 0.65 | 51.0 | 4.89e-01 | 89.4% | 73.5% |
| 4z85A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.65 | 58.0 | 4.69e-01 | 98.1% | 68.5% |
| 2hq7B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.65 | 54.0 | 4.89e-01 | 90.4% | 76.1% |
| 1a8pA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.65 | 41.0 | 4.31e-01 | 85.6% | 70.5% |
| 5jv4A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.65 | 53.0 | 4.81e-01 | 89.4% | 86.6% |
| 2htdB00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 53.0 | 5.03e-01 | 89.4% | 79.0% |
| 5escA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 53.0 | 5.09e-01 | 89.4% | 84.9% |
| 2arzA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 53.0 | 4.68e-01 | 89.4% | 76.0% |
| 3ec6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 53.0 | 4.92e-01 | 89.4% | 80.5% |
| 3gasB02 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 52.0 | 4.46e-01 | 89.4% | 70.2% |
| 2i02A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 52.0 | 4.73e-01 | 89.4% | 75.0% |
| 2fg9A01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 52.0 | 4.49e-01 | 89.4% | 76.1% |
| 2re7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 52.0 | 4.79e-01 | 90.4% | 83.3% |
| 2xxlA03 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.62 | 51.0 | 4.76e-01 | 88.5% | 77.7% |
| 1rfeA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 51.0 | 4.69e-01 | 89.4% | 77.9% |
| 1hpgA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.62 | 44.0 | 4.57e-01 | 88.5% | 78.8% |
| 2gk6A02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.62 | 39.0 | 4.27e-01 | 76.0% | 79.5% |
| 2fhqA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 51.0 | 4.70e-01 | 90.4% | 79.3% |
| 2bhgA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.61 | 47.0 | 4.95e-01 | 94.2% | 91.3% |
| 5bncB01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 50.0 | 4.43e-01 | 89.4% | 74.5% |
| 3k6yA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.60 | 48.0 | 4.84e-01 | 89.4% | 85.0% |
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 30.0 | 3.40e-01 | 100.0% | 66.2% |
| 4apmA03 | 2.60.40.4360 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 28.0 | 3.58e-01 | 95.2% | 87.7% |
| 2fgzA01 | 2.60.40.1130 | Mainly Beta › Sandwich › Immunoglobulin-like › Rab geranylgeranyltransferase alpha-subunit, insert domain | 0.52 | 37.0 | 3.64e-01 | 76.0% | 78.3% |
| 2yrvA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 28.0 | 2.81e-01 | 91.3% | 47.8% |
| 5f7uA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 34.0 | 3.33e-01 | 76.9% | 62.2% |
| 4fpwB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 35.0 | 3.01e-01 | 71.2% | 77.6% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3171972 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.75 | 62.0 | 5.22e-01 | 89.4% | 79.8% |
| 3720023 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 52.0 | 5.35e-01 | 81.7% | 75.0% |
| 4608778 | 1.1.7.107 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25965 | 0.74 | 51.0 | 4.85e-01 | 76.0% | 61.7% |
| 5018991 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 55.0 | 5.89e-01 | 95.2% | 91.1% |
| 5037173 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.72 | 43.0 | 4.53e-01 | 76.9% | 65.3% |
| 4141852 | 1.1.13.56 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › YQBQ | 0.71 | 55.0 | 6.08e-01 | 91.3% | 100.0% |
| 5056905 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.71 | 44.0 | 4.73e-01 | 75.0% | 72.2% |
| 5038876 | 1.1.13.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach | 0.71 | 58.0 | 6.24e-01 | 87.5% | 100.0% |
| 3283078 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.70 | 59.0 | 5.24e-01 | 90.4% | 84.6% |
| 4519111 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.70 | 45.0 | 4.82e-01 | 77.9% | 74.4% |
| 3785886 | 1.1.5.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › FMN_bind_2 | 0.70 | 58.0 | 4.63e-01 | 89.4% | 72.2% |
| 4285594 | 1.1.12.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth | 0.69 | 48.0 | 4.52e-01 | 89.4% | 59.2% |
| 3590201 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 63.0 | 6.21e-01 | 97.1% | 98.1% |
| 4032900 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 60.0 | 6.07e-01 | 93.3% | 99.0% |
| 3278636 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.68 | 56.0 | 4.92e-01 | 89.4% | 76.1% |
| 4033712 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.67 | 52.0 | 5.64e-01 | 83.7% | 100.0% |
| 184471 | 1.1.13.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st | 0.66 | 52.0 | 5.65e-01 | 90.4% | 100.0% |
| 3279818 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.66 | 56.0 | 4.96e-01 | 90.4% | 65.3% |
| 3388199 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.65 | 54.0 | 4.55e-01 | 89.4% | 69.4% |
| 4966449 | 1.1.13.72 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › CBS | 0.65 | 51.0 | 5.31e-01 | 92.3% | 93.7% |
| 3449628 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.64 | 44.0 | 4.28e-01 | 89.4% | 62.6% |
| 1883205 | 1.1.13.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Caud_tail_N | 0.64 | 53.0 | 5.24e-01 | 88.5% | 95.5% |
| 4975825 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.64 | 53.0 | 4.76e-01 | 89.4% | 83.3% |
| 3503044 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.64 | 53.0 | 4.34e-01 | 89.4% | 51.4% |
| 3507692 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.63 | 52.0 | 4.63e-01 | 89.4% | 63.3% |
| 3464866 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.63 | 52.0 | 4.64e-01 | 91.3% | 62.7% |
| 3462061 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.63 | 52.0 | 4.10e-01 | 92.3% | 43.3% |
| 3822637 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 38.0 | 3.97e-01 | 76.0% | 66.3% |
| 3436414 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.62 | 45.0 | 3.67e-01 | 88.5% | 38.6% |
| 3505835 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.62 | 51.0 | 3.84e-01 | 89.4% | 37.6% |
| 3406002 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.58 | 48.0 | 3.75e-01 | 90.4% | 42.2% |
| 3428120 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.58 | 48.0 | 3.50e-01 | 91.3% | 94.5% |
| 3230881 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 39.0 | 3.35e-01 | 76.0% | 46.7% |
| 3460166 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 43.0 | 4.21e-01 | 88.5% | 97.4% |
| 3251680 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.53 | 37.0 | 3.50e-01 | 96.2% | 60.8% |
| 3385240 | 11.1.1.545 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Chromosome_seg | 0.52 | 42.0 | 4.12e-01 | 88.5% | 96.6% |
| 3247872 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.52 | 37.0 | 3.51e-01 | 75.0% | 60.8% |
| 3231323 | 60.1.1.0 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain | 0.52 | 42.0 | 3.91e-01 | 89.4% | 92.6% |