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MF663786.1__ATI15656.1__X__00038

Bact-Vir

MF663786.1__ATI15656.1__X__00038

Identity

Accession:
MF663786 ↗
Kingdom:
phage

Quality

82.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Phabquatrovirus› Bordetella_phage_vB_BbrM_PHB04

TaxID: 2029657

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-30_53-94
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qdfA02 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.62 45.0 4.33e-01 78.6% 94.0%
4mn5A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.60 43.0 3.86e-01 77.1% 77.7%
2veaA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.55 46.0 3.85e-01 97.1% 69.2%
4hpqB00 2.60.270.60 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Autophagy-related protein 31 0.54 40.0 3.43e-01 80.0% 91.3%
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.52 38.0 3.55e-01 78.6% 68.5%
2bw8A00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.52 37.0 2.73e-01 80.0% 75.7%
3zi1A02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.51 36.0 2.90e-01 74.3% 69.7%
3plsA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 35.0 3.18e-01 72.9% 54.8%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3894438 5.1.4.73 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RAB3GAP2_N 0.65 49.0 2.89e-01 78.6% 16.2%
4012346 11.8.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like 0.63 45.0 3.41e-01 77.1% 96.1%
3924546 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.62 42.0 3.43e-01 70.0% 65.4%
3718996 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 45.0 2.76e-01 80.0% 18.8%
3611540 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.59 43.0 2.66e-01 78.6% 21.8%
6866 223.1.1.12 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_2 0.58 42.0 3.60e-01 77.1% 65.8%
3622828 5.1.4.319 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR11_1st 0.57 42.0 2.65e-01 77.1% 26.2%
3586673 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 43.0 2.66e-01 78.6% 25.5%
3995113 331.4.1.1 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 0.57 39.0 3.56e-01 71.4% 76.8%
3720086 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 44.0 3.30e-01 82.9% 90.6%
3265408 2004.1.1.453 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1, NOG1 0.57 48.0 3.60e-01 95.7% 98.9%
3213981 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.55 43.0 2.72e-01 87.1% 69.5%
4023011 2003.1.3.5 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › NAD_binding_8 0.54 40.0 2.77e-01 77.1% 48.9%
4097524 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 33.0 3.37e-01 75.7% 61.4%
3719036 59.1.1.0 ↗ beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like 0.54 39.0 3.89e-01 77.1% 98.6%
3489862 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.54 38.0 2.21e-01 77.1% 7.6%
3480932 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 38.0 3.34e-01 77.1% 92.4%
5053568 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 42.0 3.62e-01 100.0% 78.5%
4333320 4263.2.1.1 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext 0.52 37.0 3.83e-01 78.6% 80.0%
4238796 10.1.1.15 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_12 0.52 40.0 2.79e-01 84.3% 44.0%
3172340 2004.1.1.132 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DLIC 0.51 44.0 3.10e-01 100.0% 78.4%
4033072 101.1.9.32 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › ANT 0.51 36.0 3.37e-01 72.9% 82.4%
3517917 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.51 39.0 4.00e-01 85.7% 95.4%
3687104 10.1.1.15 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_12 0.51 45.0 3.02e-01 98.6% 60.8%
3524747 827.1.1.1 ↗ a+b two layers › Integrin beta tail domain › Integrin beta tail domain › Integrin beta tail domain › Integrin_B_tail 0.50 36.0 3.51e-01 78.6% 92.5%
5073817 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.50 43.0 3.26e-01 100.0% 96.1%