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MF663786.1__ATI15669.1__X__00051

Bact-Vir

MF663786.1__ATI15669.1__X__00051

Identity

Accession:
MF663786 ↗
Kingdom:
phage

Quality

75.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-75
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5bw0F00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.79 50.0 4.60e-01 94.3% 50.5%
1wznA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.76 48.0 5.29e-01 85.7% 80.4%
3bxoA02 2.20.130.10 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains 0.74 46.0 4.95e-01 90.0% 74.6%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.72 43.0 4.11e-01 91.4% 50.0%
3d2lA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.70 42.0 4.47e-01 90.0% 66.7%
3bcyA00 3.40.1000.40 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Respiratory growth induced protein 1 0.70 41.0 3.24e-01 85.7% 28.1%
1l3aA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.69 45.0 3.38e-01 77.1% 28.3%
4l8hB00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.67 54.0 4.51e-01 100.0% 50.4%
3oq3B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 46.0 4.03e-01 71.4% 67.0%
4jgwA01 1.20.870.10 Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 0.65 47.0 3.56e-01 75.7% 47.4%
8dqwG01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.64 47.0 3.49e-01 77.1% 46.9%
6yfiB01 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.64 57.0 4.61e-01 100.0% 54.8%
2w4yA00 2.40.160.220 Mainly Beta › Beta Barrel › Porin › 0.63 53.0 4.47e-01 94.3% 59.0%
1ah5A03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.62 47.0 4.49e-01 98.6% 67.4%
3volA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.62 42.0 3.43e-01 70.0% 35.5%
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.62 38.0 4.10e-01 85.7% 71.7%
2rfrA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 47.0 3.62e-01 98.6% 37.7%
2bolA03 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 44.0 3.98e-01 100.0% 57.0%
3ijtB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 47.0 3.80e-01 88.6% 92.3%
1luiA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.59 49.0 4.29e-01 100.0% 61.1%
1g6q102 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.58 46.0 3.36e-01 85.7% 56.5%
2gvhB02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.58 48.0 3.99e-01 90.0% 82.9%
6z9cA01 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.56 45.0 3.70e-01 85.7% 68.0%
3qeeB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.56 39.0 2.60e-01 91.4% 17.1%
3ecrB03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.56 47.0 4.28e-01 100.0% 71.6%
4inaA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.55 42.0 3.05e-01 81.4% 88.3%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 35.0 3.57e-01 100.0% 65.2%
4ydzA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 40.0 3.35e-01 100.0% 41.5%
2gaiA03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.55 43.0 3.62e-01 100.0% 49.6%
3g3tA00 3.20.100.30 Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › VTC, catalytic tunnel domain 0.54 46.0 3.16e-01 98.6% 32.8%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.54 38.0 3.65e-01 78.6% 65.0%
1iicA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 45.0 3.09e-01 94.3% 59.3%
4gzvA00 2.40.128.490 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14869 family, DUF4488 0.53 37.0 3.03e-01 94.3% 36.7%
3besR02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 48.0 4.11e-01 100.0% 80.2%
7pkwA01 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 33.0 2.98e-01 85.7% 43.7%
1olzA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 44.0 2.63e-01 90.0% 25.3%
5mu3B00 3.40.50.12050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 45.0 3.48e-01 98.6% 46.6%
2hqlA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 36.0 3.46e-01 100.0% 60.4%
1jv2A04 2.60.40.1530 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 4 0.51 42.0 3.25e-01 98.6% 92.6%
2gtlN02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.51 43.0 3.34e-01 98.6% 57.1%
1lkfA00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.51 44.0 2.95e-01 100.0% 96.2%
1mmuA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.51 42.0 2.66e-01 90.0% 61.4%
1pn2B01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.50 41.0 3.19e-01 88.6% 95.3%
2r55A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 42.0 3.14e-01 100.0% 78.4%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4974362 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.81 49.0 3.28e-01 81.4% 17.3%
3301049 4272.1.1.1 a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.76 55.0 4.58e-01 100.0% 45.0%
3937193 223.2.1.37 a+b three layers › Profilin-like › profilin-like › profilin-like › C9orf72-like 0.71 56.0 4.20e-01 100.0% 34.3%
5034595 4272.1.1.1 a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.71 52.0 3.91e-01 100.0% 31.6%
3625217 223.2.1.37 a+b three layers › Profilin-like › profilin-like › profilin-like › C9orf72-like 0.70 56.0 4.06e-01 100.0% 31.0%
3962318 4321.1.1.0 a+b two layers › Peptidoglycan deacetylase N-terminal noncatalytic region › Peptidoglycan deacetylase N-terminal noncatalytic region › Peptidoglycan deacetylase N-terminal noncatalytic region 0.70 44.0 3.15e-01 81.4% 22.0%
3973879 223.1.1.24 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_8 0.70 51.0 3.95e-01 78.6% 46.5%
4400500 223.1.1.132 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS, sCache_3_2 0.69 46.0 3.02e-01 75.7% 16.3%
3192871 220.1.1.194 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2nd_LRR 0.69 56.0 4.12e-01 87.1% 39.4%
3244569 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.69 47.0 4.45e-01 98.6% 58.8%
4379531 223.1.1.41 a+b three layers › Profilin-like › sensor domains › sensor domains › HisK_sensor 0.68 47.0 3.40e-01 71.4% 29.2%
3703112 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.68 46.0 3.83e-01 75.7% 40.8%
4444613 6086.1.1.0 extended segments › N-terminal domain of small heat shock protein Tsp36 › N-terminal domain of small heat shock protein Tsp36 › N-terminal domain of small heat shock protein Tsp36 0.68 48.0 3.15e-01 74.3% 28.0%
4431434 223.1.1.43 a+b three layers › Profilin-like › sensor domains › sensor domains › CusS 0.67 44.0 3.36e-01 70.0% 28.2%
5051461 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.66 52.0 3.92e-01 100.0% 35.3%
3572874 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.65 45.0 4.28e-01 92.9% 60.0%
3831707 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.65 44.0 2.79e-01 70.0% 22.0%
3998954 223.2.1.37 a+b three layers › Profilin-like › profilin-like › profilin-like › C9orf72-like 0.64 56.0 4.54e-01 100.0% 51.5%
5052575 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 50.0 3.75e-01 100.0% 33.3%
4960428 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.62 43.0 2.97e-01 74.3% 20.4%
4058654 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.62 48.0 4.30e-01 100.0% 59.6%
3421524 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 47.0 2.94e-01 85.7% 14.2%
5029914 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.62 42.0 4.54e-01 100.0% 90.9%
3503973 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 45.0 3.68e-01 98.6% 42.3%
3774553 223.2.1.22 a+b three layers › Profilin-like › profilin-like › profilin-like › Folliculin 0.60 50.0 3.42e-01 100.0% 25.0%
4161565 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.60 50.0 4.58e-01 100.0% 70.5%
3608102 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.59 42.0 4.30e-01 100.0% 77.1%
4026006 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.59 39.0 3.79e-01 95.7% 60.0%
3865594 11.1.1.640 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZP-N 0.58 40.0 3.47e-01 71.4% 62.7%
3616441 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.58 40.0 3.36e-01 71.4% 55.8%
3972133 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.58 40.0 2.86e-01 74.3% 21.7%
3937910 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.57 43.0 4.11e-01 98.6% 68.2%
3270014 5.1.4.223 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd 0.57 38.0 2.31e-01 84.3% 11.0%
3472421 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.57 48.0 3.86e-01 94.3% 48.5%
3605420 2484.1.1.26 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi 0.57 50.0 3.45e-01 100.0% 34.0%
3188712 4.1.1.225 beta barrels › SH3 › SH3 › SH3 › DUF7025 0.57 42.0 3.80e-01 100.0% 57.0%
5046475 2.2.1.0 beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins 0.56 47.0 4.09e-01 100.0% 75.0%
3479176 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.56 40.0 3.94e-01 100.0% 68.8%
3284948 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 46.0 4.41e-01 100.0% 77.6%
3490957 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.56 41.0 4.10e-01 97.1% 76.0%
3544903 5.1.4.13 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP 0.56 48.0 3.03e-01 100.0% 29.2%
1559028 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.55 40.0 3.35e-01 100.0% 41.5%
3627506 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.55 41.0 3.64e-01 100.0% 52.7%
2885155 109.21.1.1 alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleopor_Nup85 0.55 45.0 2.61e-01 91.4% 58.6%
3939569 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.54 40.0 3.79e-01 98.6% 65.9%
4990210 283.2.1.8 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › PF29994 0.54 35.0 3.18e-01 70.0% 48.4%
4984054 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.54 46.0 3.31e-01 100.0% 33.3%
3494249 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.54 40.0 3.34e-01 98.6% 43.0%
3838085 7503.1.1.11 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › HP1454-like_C 0.54 42.0 3.90e-01 100.0% 65.0%
3923465 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.54 40.0 3.59e-01 100.0% 55.2%
5073160 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.54 47.0 3.87e-01 100.0% 61.5%
3761138 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.53 42.0 3.66e-01 98.6% 53.9%
3389979 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.53 39.0 3.39e-01 100.0% 47.5%
3494009 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.53 39.0 3.72e-01 98.6% 64.4%
4640369 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.53 43.0 3.77e-01 94.3% 59.0%
3492201 295.1.1.1 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 0.53 38.0 3.73e-01 78.6% 72.0%
5072207 2484.1.1.59 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.53 45.0 3.02e-01 100.0% 35.5%
3821170 319.1.1.15 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF27746 0.52 38.0 3.38e-01 100.0% 51.8%
5045679 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 42.0 3.68e-01 100.0% 92.0%
3391461 3308.2.1.1 beta duplicates or obligate multimers › periplasmic lysozyme inhibitor of I-type lysozyme-like › XAC2610 protein › XAC2610 protein › 4_1_CTD 0.51 39.0 3.82e-01 81.4% 98.7%
3635930 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.51 44.0 3.44e-01 98.6% 74.2%
3990202 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 45.0 3.87e-01 100.0% 86.4%
3867688 11.1.1.614 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_ZP2 0.50 44.0 3.64e-01 97.1% 87.2%