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MF668275.1__ASZ73376.1__SEA_LUCKYBARNES_59__00059

Bact-Vir

MF668275.1__ASZ73376.1__SEA_LUCKYBARNES_59__00059

Identity

Accession:
MF668275 ↗
Kingdom:
phage

Quality

87.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Luckybarnesvirus› Brevibacterium_phage_LuckyBarnes

TaxID: 2027888

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-100
PDB
Domain cluster: rep: NC_049471.1__YP_009884594.1__HYQ01_gp109__00109__D8-99
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1a73A00 3.90.75.10 Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › Homing Intron 3 (I-ppo) Encoded Endonuclease; Chain A 0.65 57.0 4.80e-01 98.9% 69.1%
1u3eM01 3.90.75.20 Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › 0.61 51.0 4.95e-01 92.5% 81.1%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
89916 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.65 57.0 4.78e-01 98.9% 69.8%
8233 378.1.1.6 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › zf-His_Me_endon 0.65 57.0 4.80e-01 98.9% 69.1%
3207695 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.62 29.0 3.78e-01 75.3% 80.0%
3586841 378.1.1.7 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NUMOD4,HNH_3 0.62 52.0 4.90e-01 92.5% 86.1%
3688034 377.1.1.5 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.61 29.0 2.89e-01 76.3% 41.0%
3178127 386.1.1.1 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.61 28.0 3.55e-01 88.2% 76.0%
3988577 4.16.1.1 ↗ beta barrels › SH3 › PhtA domain-like › PhtA domain-like › Strep_his_triad 0.60 29.0 3.49e-01 92.5% 68.3%
3988598 4.16.1.1 ↗ beta barrels › SH3 › PhtA domain-like › PhtA domain-like › Strep_his_triad 0.59 29.0 3.40e-01 93.5% 64.6%
4959077 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 29.0 3.38e-01 71.0% 75.0%
3786096 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.52 44.0 3.49e-01 93.5% 63.1%
3438520 511.1.1.1 ↗ beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 0.52 44.0 3.01e-01 93.5% 80.9%
3307718 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.52 42.0 3.83e-01 87.1% 82.5%
3313424 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.52 44.0 3.54e-01 93.5% 67.2%
3348808 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.51 43.0 2.83e-01 93.5% 66.3%
3595871 511.1.1.0 ↗ beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain 0.51 43.0 2.99e-01 93.5% 81.2%
None — 0.51 43.0 3.27e-01 93.5% 53.8%
4015579 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.51 43.0 2.81e-01 93.5% 28.9%
4539356 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.51 43.0 2.87e-01 93.5% 32.7%
3258354 511.1.1.1 ↗ beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 0.50 42.0 2.92e-01 93.5% 35.9%
3372166 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.50 42.0 2.76e-01 93.5% 27.5%
3889019 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.50 42.0 3.43e-01 94.6% 65.4%