Back to structures

MF668280.1__ASZ74577.1__SEA_PHABBA_2__00002

Bact-Vir

MF668280.1__ASZ74577.1__SEA_PHABBA_2__00002

Identity

Accession:
MF668280 ↗
Kingdom:
phage

Quality

80.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-50
PDB
Domain cluster: representative
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3rx6A00 1.20.58.1090 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phage polarity suppression protein monomer 0.91 82.0 5.27e-01 100.0% 23.5%
3d36B02 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.89 74.0 6.59e-01 100.0% 65.6%
2gv9A05 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.89 71.0 6.36e-01 100.0% 64.4%
3k6tB00 1.20.5.4010 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.89 83.0 7.97e-01 100.0% 89.8%
4abmD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.88 79.0 6.50e-01 100.0% 71.4%
4gyoA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.88 76.0 4.76e-01 100.0% 19.1%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.88 77.0 6.33e-01 100.0% 55.7%
1x4tA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.87 79.0 7.14e-01 100.0% 93.1%
1jogA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.87 78.0 5.41e-01 100.0% 43.0%
4jvyB00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.87 80.0 5.09e-01 100.0% 89.5%
4mk3A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.86 76.0 5.54e-01 100.0% 40.9%
3behB01 1.20.120.540 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels 0.85 69.0 5.05e-01 100.0% 34.2%
2zttA00 6.10.140.720 Special › Helix non-globular › Helix Hairpins › 0.85 72.0 6.11e-01 97.7% 58.9%
2yevA02 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.84 75.0 6.25e-01 100.0% 59.5%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.83 74.0 5.47e-01 100.0% 40.0%
3dytA02 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.83 71.0 4.66e-01 100.0% 24.7%
4l8jA04 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.82 70.0 6.46e-01 100.0% 78.0%
1yxrA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.82 69.0 5.87e-01 100.0% 58.1%
2qkdA02 2.60.120.1040 Mainly Beta › Sandwich › Jelly Rolls › ZPR1, A/B domain 0.81 66.0 4.63e-01 97.7% 28.6%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.80 65.0 4.79e-01 100.0% 35.0%
1wa8A00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.79 66.0 5.22e-01 100.0% 60.6%
2ptfB02 1.20.58.290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. 0.78 61.0 5.73e-01 100.0% 70.2%
2lw1A00 1.10.287.380 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain 0.78 66.0 5.39e-01 100.0% 51.8%
5c8aA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.77 63.0 5.36e-01 97.7% 56.4%
3n5lA03 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.77 62.0 5.79e-01 100.0% 71.9%
6tkvA01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.77 66.0 5.81e-01 100.0% 67.6%
3k1hA00 3.30.1120.180 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076 0.77 63.0 4.59e-01 100.0% 34.8%
1vf7A03 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.76 65.0 5.94e-01 100.0% 76.7%
3tufA00 1.10.287.4300 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Stage III sporulation protein AH-like 0.76 65.0 4.82e-01 100.0% 37.4%
3exmA01 2.40.380.10 Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like 0.74 66.0 4.27e-01 100.0% 44.1%
1lfkA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.73 66.0 3.81e-01 100.0% 12.0%
1tfeA02 1.10.286.20 Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › 0.73 48.0 4.81e-01 75.0% 66.7%
4v1gA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.73 60.0 4.97e-01 97.7% 78.8%
4kb2A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.72 59.0 4.62e-01 100.0% 78.0%
5o6uB00 3.30.70.2540 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › CRISPR-associated endoribonuclease Cas6/Csy4 0.72 56.0 3.73e-01 97.7% 21.4%
4asvA00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.72 56.0 4.78e-01 93.2% 51.9%
2e9fB01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.72 60.0 4.76e-01 97.7% 47.9%
2guzA00 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.71 60.0 5.23e-01 100.0% 62.0%
3zdmB00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.70 58.0 5.60e-01 95.5% 84.0%
1wpbG01 1.10.287.680 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.70 51.0 4.86e-01 81.8% 68.5%
2gsqA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.69 54.0 4.26e-01 100.0% 38.9%
6f1eA01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.68 55.0 4.03e-01 100.0% 31.7%
1irxA05 1.10.10.350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.68 50.0 3.93e-01 79.5% 86.0%
2cr7A01 1.20.1160.11 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix 0.67 49.0 4.52e-01 86.4% 58.7%
3qxzA02 1.10.12.10 Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 0.65 57.0 5.19e-01 97.7% 95.0%
2kw6A00 6.10.140.1300 Special › Helix non-globular › Helix Hairpins › 0.65 49.0 4.58e-01 100.0% 64.6%
2jaeA03 1.20.1440.240 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.62 48.0 3.96e-01 100.0% 50.5%
3nivC02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.62 48.0 3.71e-01 100.0% 39.5%
2jgdB02 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.61 51.0 3.03e-01 93.2% 74.4%
3mggA02 6.10.140.1580 Special › Helix non-globular › Helix Hairpins › 0.61 49.0 4.03e-01 97.7% 48.3%
4izzB02 1.10.10.1680 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain 0.60 51.0 4.52e-01 100.0% 88.2%
2a8pA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.60 42.0 2.77e-01 79.5% 17.2%
4od8D00 6.10.140.1880 Special › Helix non-globular › Helix Hairpins › 0.56 45.0 4.37e-01 95.5% 86.3%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4193561 192.6.1.0 alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain 0.99 85.0 8.51e-01 100.0% 88.9%
4971062 192.15.1.0 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.94 88.0 6.87e-01 100.0% 60.0%
3698138 5055.1.1.0 extended segments › Small-conductance potassium channel › Small-conductance potassium channel › Small-conductance potassium channel 0.92 72.0 5.69e-01 100.0% 43.5%
3735607 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.91 82.0 6.62e-01 100.0% 55.0%
3582379 3826.1.1.0 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) 0.91 81.0 6.93e-01 100.0% 63.8%
3706056 604.22.1.0 alpha bundles › Spectrin repeat-like › tubulin binding cofactor C N-terminal domain › tubulin binding cofactor C N-terminal domain 0.89 80.0 6.34e-01 100.0% 51.8%
3805810 109.4.1.1425 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exo84_C, PF27696 0.88 78.0 4.30e-01 100.0% 11.5%
5080738 192.15.1.47 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › GvpK 0.87 79.0 6.24e-01 100.0% 51.8%
4036632 192.15.1.47 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › GvpK 0.87 77.0 5.97e-01 100.0% 46.3%
4118522 605.1.1.137 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › RRP36 0.87 77.0 5.20e-01 100.0% 28.6%
5060201 4163.1.1.1 alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 0.86 71.0 5.06e-01 100.0% 32.0%
3511354 4146.1.1.0 alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like 0.86 60.0 6.30e-01 75.0% 100.0%
3619662 192.12.1.3 alpha bundles › Long alpha-hairpin › Transcriptional repressor TraM › Transcriptional repressor TraM › DUF747 0.85 75.0 6.18e-01 100.0% 55.0%
4333666 109.46.1.1 alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) › CTLH 0.85 75.0 4.39e-01 100.0% 13.1%
4955981 101.1.2.875 alpha arrays › HTH › HTH › winged helix domain › HTH_3 0.84 72.0 5.45e-01 97.7% 42.0%
5054703 7512.1.1.18 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycogen_syn 0.82 71.0 4.22e-01 97.7% 14.0%
5014387 3826.1.1.100 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › DUF2304 0.80 70.0 5.68e-01 100.0% 51.8%
3842812 10.12.1.1 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.77 65.0 4.19e-01 100.0% 21.9%
5078867 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.77 63.0 5.17e-01 100.0% 48.9%
4995305 604.5.1.2 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU 0.76 64.0 5.10e-01 100.0% 61.1%
4996648 2006.1.4.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN 0.76 64.0 4.25e-01 90.9% 46.5%
3742303 310.2.1.1 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF 0.74 66.0 4.24e-01 100.0% 87.6%
4086475 3755.3.1.466 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › CC_BshC 0.73 64.0 4.37e-01 100.0% 31.0%
3412555 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.72 61.0 4.68e-01 100.0% 47.3%
3988454 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.72 57.0 5.16e-01 100.0% 62.9%
3720672 109.4.1.1591 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › U-box 0.72 63.0 3.83e-01 97.7% 18.6%
4276514 3826.1.1.88 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › CC_BshC 0.72 64.0 5.48e-01 100.0% 62.9%
3691750 376.1.1.8 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box 0.71 63.0 4.28e-01 97.7% 34.9%
5013989 5069.1.3.0 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits 0.71 60.0 4.76e-01 100.0% 46.9%
3982740 5086.1.1.190 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › OEP 0.71 55.0 3.66e-01 100.0% 20.5%
5043291 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.71 61.0 5.04e-01 97.7% 55.0%
None 0.70 54.0 3.29e-01 81.8% 15.2%
5066143 5041.1.1.0 extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C 0.68 57.0 4.87e-01 97.7% 58.7%
3988447 5043.1.1.0 extended segments › Sensor proteins transmembrane domains › Htr2 transmembrane domain-like › Htr2 transmembrane domain-like 0.65 55.0 5.17e-01 97.7% 81.8%
D2 high residues 61-119
PDB
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4htgA03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.81 68.0 6.15e-01 91.5% 75.9%
4jhcB00 3.90.950.10 Alpha Beta › Alpha-Beta Complex › Maf protein › 0.80 66.0 4.60e-01 89.8% 96.2%
3tw8A01 3.30.450.200 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin module 0.76 64.0 4.89e-01 94.9% 41.3%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.75 65.0 6.18e-01 100.0% 90.1%
3eqvA02 3.30.450.330 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.73 64.0 4.95e-01 100.0% 51.9%
2l2mA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.72 62.0 5.93e-01 98.3% 97.1%
3dpuB03 3.30.310.200 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.69 48.0 3.93e-01 72.9% 81.5%
2k4vA00 3.30.160.370 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 0.69 57.0 4.58e-01 96.6% 56.0%
3f6gA01 3.30.160.740 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.67 57.0 5.82e-01 98.3% 98.3%
1cb8A03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.67 47.0 3.79e-01 74.6% 61.8%
1gofA02 2.130.10.80 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Galactose oxidase/kelch, beta-propeller 0.66 49.0 2.97e-01 79.7% 21.4%
2l3tA02 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.66 54.0 4.71e-01 98.3% 71.0%
2nugB02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.66 56.0 5.31e-01 100.0% 90.1%
1z94B00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.65 52.0 3.84e-01 84.7% 97.9%
3thxB02 3.30.420.110 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain 0.65 51.0 3.77e-01 84.7% 34.9%
1l3aA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.65 55.0 4.02e-01 94.9% 71.1%
8ouzD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 46.0 3.03e-01 74.6% 91.7%
1sr9A02 3.30.160.270 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Alpha-isopropylmalate synthase LeuA, regulatory domain 0.64 53.0 3.92e-01 94.9% 34.8%
1e8oD00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.64 47.0 4.28e-01 78.0% 68.4%
3dcxA00 2.30.29.50 Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain 0.64 46.0 3.71e-01 78.0% 41.0%
4i8oA02 3.30.160.690 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain 0.63 50.0 4.37e-01 94.9% 56.7%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.63 54.0 3.34e-01 96.6% 21.8%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 50.0 3.77e-01 86.4% 59.2%
1i1iP02 3.40.390.10 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) 0.62 50.0 3.81e-01 93.2% 73.5%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.62 50.0 3.71e-01 89.8% 66.9%
4ge6A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.61 51.0 3.28e-01 96.6% 84.5%
1vp2A00 3.90.950.10 Alpha Beta › Alpha-Beta Complex › Maf protein › 0.60 47.0 3.27e-01 84.7% 95.2%
6i4pA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 40.0 3.22e-01 71.2% 53.2%
2r39A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 45.0 3.69e-01 81.4% 83.5%
3dghA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 40.0 3.20e-01 71.2% 52.8%
1sezA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 52.0 3.65e-01 98.3% 98.3%
4mxtA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.58 46.0 3.37e-01 100.0% 29.4%
3p0cA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.58 48.0 4.02e-01 96.6% 76.6%
1b7yA00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.57 48.0 3.20e-01 100.0% 33.2%
1qwdB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 39.0 2.99e-01 78.0% 54.8%
2xlpB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 44.0 2.70e-01 84.7% 37.1%
1a5yA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.55 46.0 2.99e-01 96.6% 98.2%
2rsxA00 3.10.450.420 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 41.0 3.06e-01 84.7% 32.7%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.54 42.0 4.08e-01 89.8% 78.3%
3eb7A03 2.100.10.10 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain 0.53 40.0 2.87e-01 84.7% 46.2%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.53 38.0 3.78e-01 78.0% 79.4%
3lxrF00 1.10.4120.20 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › 0.53 42.0 3.17e-01 98.3% 72.9%
4cy8A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 45.0 3.04e-01 100.0% 33.2%
2qcuB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 43.0 2.99e-01 94.9% 91.3%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.53 37.0 3.67e-01 78.0% 75.4%
2i1yA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.52 46.0 2.94e-01 98.3% 99.3%
3fgbA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 38.0 2.44e-01 81.4% 21.2%
3l4gC04 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.51 41.0 2.78e-01 98.3% 27.0%
4bfmA00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.51 41.0 2.74e-01 100.0% 94.2%
4czuA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 38.0 3.38e-01 84.7% 95.7%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.50 34.0 3.46e-01 71.2% 98.2%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.50 39.0 3.89e-01 89.8% 87.3%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3932304 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.81 71.0 5.13e-01 98.3% 36.9%
4135153 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.80 71.0 6.50e-01 96.6% 81.3%
5049116 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.79 67.0 4.59e-01 89.8% 36.7%
4552605 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.78 70.0 6.34e-01 98.3% 79.5%
3797649 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.78 70.0 5.61e-01 98.3% 67.3%
3623902 223.2.1.4 a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.78 68.0 4.94e-01 98.3% 36.9%
4638787 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.76 69.0 6.21e-01 100.0% 77.5%
3392312 223.2.1.4 a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.76 66.0 4.74e-01 98.3% 34.7%
3472961 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.76 67.0 4.94e-01 98.3% 40.0%
4608418 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.76 66.0 5.89e-01 98.3% 76.5%
3947062 2484.1.1.194 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve, rve_3 0.76 68.0 4.61e-01 98.3% 86.2%
5052285 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.75 58.0 4.70e-01 81.4% 47.6%
4393617 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.74 66.0 5.10e-01 100.0% 62.3%
4080057 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.74 65.0 5.79e-01 100.0% 77.6%
4304505 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.73 64.0 5.01e-01 100.0% 53.8%
3801624 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.73 62.0 5.33e-01 100.0% 66.0%
3730653 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.72 62.0 5.89e-01 96.6% 84.3%
3500942 330.1.1.3 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dicer_dimer 0.72 64.0 5.20e-01 100.0% 65.5%
4224103 2484.1.1.48 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.70 54.0 3.93e-01 83.1% 37.5%
3178803 896.1.1.3 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP9-21 0.69 51.0 4.51e-01 78.0% 65.9%
3391727 5.1.4.156 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Ge1_WD40 0.68 60.0 3.46e-01 96.6% 15.0%
4001973 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.68 55.0 4.29e-01 89.8% 41.5%
5039634 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.68 47.0 4.60e-01 74.6% 66.2%
3606532 2484.6.1.0 mixed a+b and a/b › Ribonuclease H-like › Periplasmic domain of ExbD/TolR › Periplasmic domain of ExbD/TolR 0.67 51.0 4.44e-01 96.6% 53.3%
4998373 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.67 48.0 5.15e-01 74.6% 96.0%
3673032 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.66 52.0 4.88e-01 83.1% 78.6%
3961733 330.10.1.0 a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain 0.66 57.0 5.03e-01 100.0% 70.0%
4026653 220.1.1.11 beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru 0.64 47.0 3.81e-01 78.0% 43.6%
3938447 2484.1.1.4 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H 0.63 53.0 3.98e-01 100.0% 47.3%
3212945 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.62 44.0 4.45e-01 83.1% 76.3%
5050831 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.62 42.0 3.17e-01 71.2% 43.3%
3657538 2003.1.2.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 0.61 49.0 3.11e-01 88.1% 47.3%
5078994 2003.1.2.300 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GGR_cat 0.61 49.0 2.99e-01 89.8% 75.6%
3821886 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.61 48.0 4.53e-01 89.8% 70.7%
None 0.59 47.0 2.93e-01 88.1% 93.2%
3807776 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.59 46.0 2.92e-01 86.4% 25.8%
4027675 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.59 49.0 3.82e-01 100.0% 53.7%
3718535 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 45.0 2.86e-01 84.7% 21.9%
3505584 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.59 49.0 3.15e-01 96.6% 82.2%
3702792 2003.1.2.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO 0.58 49.0 2.95e-01 98.3% 88.5%
2595099 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.58 39.0 2.75e-01 71.2% 69.5%
5032559 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.56 47.0 4.18e-01 98.3% 84.4%
3367730 5.1.1.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › FBA_1 0.56 44.0 3.33e-01 91.5% 50.3%
5079783 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 47.0 2.76e-01 96.6% 37.9%
4213539 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.56 43.0 4.19e-01 84.7% 83.1%
3661272 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.54 44.0 2.87e-01 100.0% 51.9%
4135259 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.54 41.0 4.03e-01 84.7% 83.1%
842 9.1.1.11 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2 0.53 39.0 2.92e-01 81.4% 32.9%
4037383 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.53 37.0 3.66e-01 76.3% 78.5%
3609658 511.1.1.0 beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain 0.53 41.0 3.22e-01 84.7% 73.1%
4975949 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.53 45.0 3.06e-01 98.3% 74.5%
4158157 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.52 43.0 4.16e-01 89.8% 83.1%
3306779 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.52 37.0 3.62e-01 76.3% 78.5%
4028885 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.52 39.0 3.81e-01 84.7% 83.1%
3532417 2007.2.3.21 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase, PTP-SAK 0.52 46.0 2.91e-01 98.3% 95.9%
4201878 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.52 36.0 3.59e-01 78.0% 76.9%
4646632 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.51 37.0 3.62e-01 78.0% 78.5%
3699221 206.1.1.71 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Kdo 0.51 43.0 2.86e-01 100.0% 54.5%
4101580 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.50 37.0 3.66e-01 84.7% 83.1%