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MF668280.1__ASZ74686.1__SEA_PHABBA_117__00111

Bact-Vir

MF668280.1__ASZ74686.1__SEA_PHABBA_117__00111

Identity

Accession:
MF668280 ↗
Kingdom:
phage

Quality

80.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Myrnavirus› Mycobacterium_phage_Phabba

TaxID: 2027899

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-211
PDB
Domain cluster: rep: MH479923.1__AXH46490.1__SEA_ROBINSPARKLES_41__00041__D278-455
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4llfD02 2.60.40.4030 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 39.0 4.80e-01 76.6% 94.2%
1opoA02 2.60.40.1780 Mainly Beta › Sandwich › Immunoglobulin-like › Carmovirus coat protein 0.63 35.0 4.56e-01 75.1% 99.0%
2pn5A08 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.62 35.0 4.52e-01 89.3% 97.3%
2vo8A00 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 36.0 4.26e-01 76.6% 88.1%
5lt5A02 3.30.70.1710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain 0.57 27.0 3.69e-01 82.2% 86.3%
4aw7A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.56 29.0 3.64e-01 76.1% 81.4%
4indA01 2.60.120.1320 Mainly Beta › Sandwich › Jelly Rolls › 0.56 37.0 4.26e-01 77.2% 91.1%
2w5fB01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 39.0 4.41e-01 99.0% 98.7%
4myjA05 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 25.0 3.54e-01 83.2% 100.0%
1nxmA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 36.0 3.71e-01 94.9% 73.2%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3925072 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.69 35.0 4.90e-01 74.6% 100.0%
2126854 10.42.1.0 ↗ beta sandwiches › jelly-roll › ssRNA positive-strand viruses coat protein P (projecting) domain › ssRNA positive-strand viruses coat protein P (projecting) domain 0.66 39.0 4.81e-01 76.1% 94.1%
4954606 10.1.2.186 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › DUF3344 0.66 38.0 4.63e-01 74.6% 86.2%
4001704 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 36.0 4.58e-01 93.4% 94.8%
3551050 10.32.1.41 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GOLD_2 0.58 35.0 4.20e-01 85.8% 90.0%
3930491 10.32.1.213 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 0.55 32.0 4.08e-01 84.3% 100.0%
3861624 10.21.1.1 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 0.54 35.0 4.26e-01 85.3% 100.0%
4295323 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 30.0 3.91e-01 76.1% 99.0%
3745897 10.21.1.1 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 0.54 37.0 4.26e-01 88.8% 97.1%
3848442 10.21.1.1 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 0.53 36.0 4.12e-01 88.8% 95.7%
3909622 10.21.1.1 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 0.52 35.0 4.09e-01 88.8% 97.1%
3456716 10.32.1.38 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like 0.51 47.0 4.64e-01 99.0% 98.0%
3571841 10.21.1.0 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 0.51 39.0 3.58e-01 98.0% 61.6%
D2 medium residues 212-358_466-479
PDB
Domain cluster: rep: KM199771.1__AIK68527.1__Lo5R7ANS_57__00057__D358-488_526-544
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1s3rA04 2.60.40.1430 Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 0.62 29.0 3.46e-01 96.3% 62.2%
4ev0D01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 24.0 2.63e-01 100.0% 46.7%
4ca9A00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.52 29.0 3.55e-01 100.0% 86.7%
3bcwA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 25.0 3.04e-01 100.0% 70.2%
6nu8A02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.51 32.0 3.37e-01 95.7% 68.5%
7pzaA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 24.0 2.75e-01 100.0% 56.6%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3772640 10.21.1.1 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 0.52 27.0 3.05e-01 100.0% 63.2%
5039010 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.52 34.0 3.73e-01 100.0% 81.5%
4928383 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.51 29.0 3.70e-01 98.8% 97.8%
5082706 10.29.1.2 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in distal tail protein (Dit)-like proteins › Jelly-roll domain in distal tail protein (Dit)-like proteins › Siphovirus-type_tail_C 0.50 30.0 3.37e-01 98.1% 76.7%
3925072 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.50 30.0 3.79e-01 100.0% 100.0%
D3 medium residues 359-465
PDB