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MF668280.1__ASZ74721.1__SEA_PHABBA_181__00146

Bact-Vir

MF668280.1__ASZ74721.1__SEA_PHABBA_181__00146

Identity

Accession:
MF668280 ↗
Kingdom:
phage

Quality

66.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Myrnavirus› Mycobacterium_phage_Phabba

TaxID: 2027899

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-57
PDB
Domain cluster: representative
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1a15A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.75 61.0 5.40e-01 100.0% 62.7%
1p65A00 6.10.140.90 Special › Helix non-globular › Helix Hairpins › 0.74 40.0 3.61e-01 75.0% 38.6%
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 54.0 4.45e-01 100.0% 49.5%
2kqrA01 3.30.1910.20 Alpha Beta › 2-Layer Sandwich › so0334 like fold › asparaginyl-tRNA synthetase, N-terminal domain 0.66 48.0 4.09e-01 79.5% 94.6%
2rp4A00 6.10.280.60 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain 0.66 42.0 3.56e-01 100.0% 40.8%
3bt7A02 2.40.50.1070 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 53.0 3.80e-01 97.7% 94.5%
3vpbB03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.63 53.0 4.02e-01 100.0% 47.3%
3wknF00 6.20.50.120 Special › Other non-globular › N-terminal domain of TfIIb › 0.62 42.0 4.23e-01 75.0% 69.6%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.61 42.0 3.93e-01 79.5% 57.9%
2y8yA02 3.30.70.1210 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 0.61 43.0 3.32e-01 79.5% 30.4%
3lxqA01 3.30.1120.80 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.60 46.0 3.77e-01 100.0% 42.4%
5r0dB01 2.60.34.20 Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › 0.60 46.0 3.43e-01 97.7% 68.5%
5e75A00 1.25.40.390 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.59 40.0 2.32e-01 72.7% 6.5%
3io5A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 50.0 3.10e-01 97.7% 22.9%
2h1eA02 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 43.0 4.21e-01 93.2% 92.7%
6s2wA01 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.57 43.0 3.59e-01 84.1% 97.6%
2rsmA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 40.0 2.99e-01 77.3% 47.0%
5aj3Q00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 45.0 3.53e-01 100.0% 71.6%
2pm6D01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 47.0 2.90e-01 100.0% 33.2%
3u4qA02 1.10.274.50 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › 0.55 40.0 2.78e-01 79.5% 26.0%
3mbhA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.54 46.0 2.80e-01 95.5% 33.2%
3v98A03 3.10.450.60 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 41.0 3.18e-01 90.9% 42.2%
5teaB00 3.90.80.10 Alpha Beta › Alpha-Beta Complex › Inorganic Pyrophosphatase › Inorganic pyrophosphatase 0.54 40.0 2.95e-01 100.0% 51.7%
3u37A02 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.54 47.0 2.95e-01 100.0% 39.5%
5unhA02 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.53 44.0 2.73e-01 100.0% 15.6%
4hn3A00 3.10.570.10 Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain 0.53 41.0 2.54e-01 95.5% 41.0%
7ejoB01 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.53 39.0 3.35e-01 84.1% 100.0%
4evxA00 1.10.1740.240 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › 0.53 44.0 3.44e-01 93.2% 45.4%
3g7kA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.53 43.0 2.96e-01 100.0% 25.4%
4g7nA02 3.30.1120.130 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.53 43.0 3.44e-01 100.0% 44.3%
8eg0B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 43.0 2.59e-01 100.0% 11.7%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 40.0 3.69e-01 97.7% 68.7%
4rayA02 3.30.1490.190 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain 0.52 38.0 3.70e-01 79.5% 70.0%
3oqgA00 3.40.1440.50 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › 0.51 40.0 2.69e-01 86.4% 58.5%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.50 37.0 3.26e-01 97.7% 49.4%
7uvpA02 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.50 41.0 3.58e-01 100.0% 59.4%
3vkhB07 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 37.0 2.48e-01 97.7% 19.0%
6b1pA03 1.10.1160.10 Mainly Alpha › Orthogonal Bundle › Glutamyl-tRNA Synthetase; domain 2 › Glutamyl-trna Synthetase; Domain 2 0.50 41.0 3.45e-01 97.7% 65.1%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3230503 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.75 50.0 3.30e-01 75.0% 16.3%
5083528 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.74 37.0 2.97e-01 79.5% 24.7%
3699463 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.74 44.0 2.74e-01 100.0% 12.1%
3241447 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.72 48.0 3.57e-01 75.0% 25.8%
5012106 101.1.2.25 ↗ alpha arrays › HTH › HTH › winged helix domain › FUR 0.71 41.0 2.88e-01 75.0% 18.5%
3699899 214.1.1.6 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2_2 0.69 47.0 3.47e-01 72.7% 27.5%
3597599 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.68 47.0 3.62e-01 72.7% 33.0%
3616718 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.67 56.0 3.29e-01 97.7% 15.9%
3697241 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.67 46.0 4.37e-01 72.7% 88.7%
3480321 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 51.0 4.52e-01 100.0% 96.1%
3274487 605.1.1.155 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Gpi1 0.65 50.0 3.42e-01 100.0% 22.9%
3211871 2008.1.1.31 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › VRR_NUC 0.65 48.0 3.02e-01 84.1% 91.8%
4004358 252.2.1.3 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_1 0.64 47.0 4.54e-01 79.5% 76.0%
4297945 4325.1.1.1 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 0.64 44.0 4.11e-01 72.7% 80.0%
3419793 5.1.10.3 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › DUF295 0.64 50.0 3.56e-01 88.6% 47.4%
4188237 4325.1.1.1 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 0.63 44.0 4.19e-01 77.3% 80.0%
3234497 5001.1.1.66 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg 0.61 44.0 2.72e-01 100.0% 12.7%
3423758 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.60 50.0 3.16e-01 93.2% 90.7%
3974688 4325.1.1.0 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like 0.60 44.0 4.25e-01 81.8% 88.0%
3605369 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 45.0 4.31e-01 88.6% 96.4%
3838562 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.59 39.0 3.67e-01 100.0% 54.5%
3231587 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 48.0 3.92e-01 97.7% 88.9%
4985335 2006.1.6.15 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 0.58 48.0 3.10e-01 97.7% 71.5%
4150608 3326.1.1.1 ↗ alpha arrays › DNA-binding domain in UvrA › DNA-binding domain in UvrA › DNA-binding domain in UvrA › UvrA_DNA-bind 0.58 42.0 3.18e-01 97.7% 31.8%
3656521 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.57 40.0 3.13e-01 75.0% 36.8%
3308663 601.3.1.11 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › PHD_Oberon 0.57 42.0 3.07e-01 84.1% 41.4%
3285829 4.1.1.425 ↗ beta barrels › SH3 › SH3 › SH3 › RNHCP 0.57 42.0 3.55e-01 100.0% 49.5%
3492270 11.16.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › N-terminal domain in A1 cistron-splicing factor AAR2 › N-terminal domain in A1 cistron-splicing factor AAR2 › AAR2_1st 0.57 46.0 3.20e-01 97.7% 53.7%
4616587 101.1.2.29 ↗ alpha arrays › HTH › HTH › winged helix domain › PTS_2-RNA 0.56 39.0 2.98e-01 72.7% 40.0%
5018603 2006.1.6.15 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 0.56 43.0 2.69e-01 81.8% 70.6%
4029085 11.16.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › N-terminal domain in A1 cistron-splicing factor AAR2 › N-terminal domain in A1 cistron-splicing factor AAR2 › AAR2_1st 0.56 45.0 3.34e-01 100.0% 55.7%
3918968 5.1.4.12 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.56 46.0 2.82e-01 100.0% 92.3%
3788781 246.2.1.7 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › DNA_pol_E_B 0.56 48.0 2.81e-01 100.0% 27.3%
4253165 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.55 43.0 3.26e-01 100.0% 34.3%
3408042 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.55 44.0 2.59e-01 90.9% 76.3%
3499345 4325.1.1.0 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like 0.55 42.0 3.58e-01 93.2% 61.2%
3475813 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 39.0 3.90e-01 88.6% 80.0%
3440839 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.55 43.0 3.44e-01 93.2% 58.0%
3818705 263.1.1.1 ↗ a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF 0.54 40.0 3.25e-01 79.5% 56.2%
4988260 268.2.1.0 ↗ a+b two layers › Sterol carrier protein-like › LytR-Cps2A-Psr (LCP) enzymes › LytR-Cps2A-Psr (LCP) enzymes 0.54 42.0 2.79e-01 95.5% 27.4%
3813458 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.54 39.0 3.84e-01 81.8% 82.0%
3786489 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 45.0 2.72e-01 100.0% 44.2%
4584755 5.1.4.36 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.54 46.0 2.65e-01 100.0% 41.2%
4030033 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.54 46.0 3.92e-01 100.0% 77.3%
4947463 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.53 39.0 3.15e-01 86.4% 36.2%
3211026 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 45.0 3.60e-01 100.0% 65.3%
3899209 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.53 41.0 2.72e-01 86.4% 93.8%
1204325 2004.1.1.195 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C 0.53 43.0 2.53e-01 97.7% 96.0%
3595726 2492.1.1.8 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › UPF0172 0.52 41.0 2.77e-01 100.0% 86.8%
5016546 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.51 44.0 3.69e-01 97.7% 57.3%
5080678 4.26.1.0 ↗ beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 0.51 37.0 3.56e-01 88.6% 65.5%
3172926 2004.1.1.54 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Septin 0.51 37.0 2.30e-01 88.6% 85.3%
5025991 2005.1.1.10 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF 0.51 41.0 2.71e-01 95.5% 39.5%
3933631 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.50 41.0 2.51e-01 90.9% 28.3%
3797108 2008.1.1.29 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Dna2 0.50 45.0 2.84e-01 100.0% 78.7%
4303957 2006.1.6.15 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 0.50 44.0 2.98e-01 95.5% 27.1%
3415555 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.50 41.0 2.48e-01 90.9% 24.1%
3892155 3914.1.1.2 ↗ alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › Anoctamin,Anoct_dimer 0.50 42.0 2.26e-01 90.9% 6.4%
3240369 5001.1.1.66 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg 0.50 41.0 2.51e-01 90.9% 41.8%
3180843 109.4.1.192 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 0.50 42.0 2.74e-01 95.5% 31.2%
5006512 3012.1.1.0 ↗ a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.50 40.0 3.60e-01 97.7% 63.3%