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MF668286.1__ASZ74910.1__SEA_TRINA_96__00096
Bact-VirMF668286.1__ASZ74910.1__SEA_TRINA_96__00096
Identity
- Accession:
- MF668286 ↗
- Kingdom:
- phage
Quality
89.7
mean pLDDT
Taxonomy
TaxID: 2027905
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-103
Domain cluster:
rep: NC_070786.1__YP_010652363.1__PP460_gp195__00049__D4-112
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4zpxA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.67 | 47.0 | 4.85e-01 | 72.7% | 91.3% |
| 5vjhB02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.66 | 49.0 | 5.13e-01 | 78.8% | 90.2% |
| 2v6zM00 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.65 | 45.0 | 5.05e-01 | 78.8% | 96.0% |
| 1wn0A00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.60 | 38.0 | 3.47e-01 | 94.9% | 47.3% |
| 2mgyA01 | 1.20.1260.100 | Mainly Alpha › Up-down Bundle › Ferritin › TspO/MBR protein | 0.59 | 42.0 | 3.61e-01 | 73.7% | 80.0% |
| 4rk5A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 42.0 | 3.81e-01 | 81.8% | 87.2% |
| 1n83A00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.54 | 47.0 | 3.49e-01 | 96.0% | 89.6% |
| 4uavA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.51 | 32.0 | 3.47e-01 | 82.8% | 72.9% |
| 3bhgA01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.51 | 37.0 | 3.58e-01 | 76.8% | 74.8% |
| 3a7kB00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.51 | 45.0 | 3.38e-01 | 100.0% | 99.6% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4045490 | 606.1.1.0 ↗ | alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.67 | 38.0 | 3.96e-01 | 80.8% | 60.0% |
| 3585977 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.67 | 52.0 | 5.58e-01 | 83.8% | 98.8% |
| 5061574 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.65 | 46.0 | 5.14e-01 | 74.7% | 97.3% |
| 4024445 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.65 | 47.0 | 4.14e-01 | 73.7% | 88.6% |
| 3194523 | 148.1.3.212 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_13 | 0.65 | 47.0 | 4.55e-01 | 77.8% | 89.6% |
| 3972075 | 148.1.3.172 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_14 | 0.62 | 45.0 | 4.80e-01 | 77.8% | 96.5% |
| 3256076 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.60 | 45.0 | 4.79e-01 | 81.8% | 94.1% |
| 3731546 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.59 | 41.0 | 3.46e-01 | 72.7% | 79.4% |
| 4021753 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.57 | 42.0 | 4.48e-01 | 78.8% | 91.8% |
| 3762880 | 3930.1.1.2 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › RIG-I_C | 0.57 | 40.0 | 3.45e-01 | 72.7% | 68.4% |
| 5028520 | 610.3.1.1 ↗ | alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey | 0.55 | 45.0 | 3.90e-01 | 96.0% | 59.4% |
| 3654442 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.54 | 37.0 | 4.01e-01 | 71.7% | 86.3% |
| 3399734 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.52 | 44.0 | 3.91e-01 | 89.9% | 80.0% |
| 3784738 | 3755.4.1.43 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Ran-binding | 0.51 | 43.0 | 3.78e-01 | 92.9% | 82.7% |
| 4019703 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.51 | 41.0 | 3.43e-01 | 86.9% | 66.9% |
| 5079638 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.50 | 42.0 | 4.26e-01 | 89.9% | 97.0% |
| 4020931 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.50 | 41.0 | 2.78e-01 | 89.9% | 69.2% |